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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                             --------->MYB52(1)
                          --------->ANAC55(2)                                  --------->GLK1(2)
                          --------->ANAC58                                    --------->ARR14(2)
                          <---------ANAC55(2)                                 <---------GLK1(2)
                      <-----------HVH21  <---------At4g35610               --------->HSFB2a(2)
                     <---------ANAC46   <---------TOE1(3)            --------->ARR11(3)
                 <---------At4g35610    <---------TOE2(3)      <---------TOE1(2)
                 <---------ZAT2   ------->TEIL                <---------MYB52(1)      ----------->GT1
                 --------->ZAT2<---------MYB52(2)            <-------GAMYB --------->HSFC1(1)
  --------->MYB52(1)<-------TEIL------->GAMYB               <---------ANAC58  <---------ARR14(2)
--------ID1      --------->At4g35610<----------DOF2         <---------ANAC58--------->LBD16
--DOF5.7(2)--------->ATHB12<---------MYB52(2)         ------>ZmHOX2a(1)    <---------HSFB2a(2)     <
-->DOF2   <---------YAB1  --------->ANAC58            --------->ICU4 <---------ARR11(3)  --------->YAB1
 
gagccaaacggtgttcattgagctgcgtcaagtaacgaactttaagcttattgtgtcctgatttcgttggattatcttccagaatcgctctgtaataaga  3846800
                                                             --------->At4g35610
                                                          --------->At4g35610
                                                          <---------At4g35610
                                                      --------->ARR11(3)                        ----
            <<<<<<<<<TBF1                             <---------ARR11(3)                       -----
     --------->ZAT6                      <----------DOF2  ----------->RAV1(2)                  <----
   <-----------GT1                  ---------->ID1  ------->TEIL                               <----
----------DOF2                  <----------DOF2  <---------ATHB12<---------ALFIN1    --------->YAB1
 
cccttttaactcttcttcttcagaaaaaacttctactttgtcgtcttttctaatgaatatcatctgctccatctcaaaaacccttgaatgaaaactaata  3846900
                                                                                                 ---
                                                                     <---------YAB1              ---
                    --------->TOE1(3)                                --------->ICU4             ----
     <---------ICU4 --------->TOE2(3)                        --------->TOE2(3)    <------ZmHOX2a(1)
----->RAP2.6(3)    --------->ZAT6            --------->At4g35610   --------->CCA1(2)           -----
---->MYB52(1)     -------->P                 <---------At4g35610  --------->ARR11(1)   <----------DOF2
-------GT1    <---------At4g35610      <----------DOF2 --------->LBD16   --------->AHL20(2)    -----
-----ICU4     --------->At4g35610---------->DOF2      --------->ANAC46  <---------YAB1 <---------DAG2
 
acggctcatttttgctctgctaaccctaaatctaaaaaaagacttttctgctgaaacccgaaaaccatagatatgattatatgaaggagactttttgcaa  3847000
                                                    --------->LBD16
                                                   <---------LBD16
                                                  <---------LBD16
                                           --------->CCA1(2)
                                          --------->ARR14(2)
------>AtMYB61                          --------->ANAC58                                 <----------DOF2
---->GAMYB                              --------->ANAC58                              <---------AHL20(2)
----->MYB46(3)                          --------->ANAC46                    <----------DOF2   <-----
---->ANAC58                           <-----------GT1  ---------->DOF2   <-----------GT1 <---------DAG2
---->ANAC58                    --------->ETT(2)--------->ANAC46     <----------DOF2   <-----------GT1
 
ccaaaacacagtgctactgtgtctgtgcttagtgtcgatattcacgatacacatcggggaaagtgtgttttctttttttctttcccaatttacttttctt  3847100
                                                                                                ----
                                                                                            --------
                                                                                            <-------
                                                                                            --------
                                                                                 <---------ANAC46
                 <---------YAB1                                                  <---------ANAC58
               <---------ICU4                                                    <---------ANAC58<--
               --------->YAB1                                                 --------->ALFIN1------
              --------->ICU4         --------->ICU4                      --------->MYB52(1) <-------
        <----------DOF2   --------->ATHB12                           <---------AHL20(2)    <------ZmHOX2a(1)
       <-------GAMYB     --------->ICU4                              --------->AHL20(2)  <---------TOE1(2)
-----DOF2     <---------ATHB51  <---------TOE2(3)               <---------MYB59 <------NtERF2<------ZmHOX2a(2)
 
tttttttggcgcttgaaattatgagaaaatgatttaagaaattatcaggcccaaactatctaatgggcctaattaaaaacggtgtcgtttcataggatcc  3847200
                        <---------ARR11(3)
                       <---------CCA1(2)
         --------->ANAC58
         --------->ANAC58
         ----------->GT1--------->ARR11(3)
       <-----------RAV1(2)
  --------->ANAC46    --------->ARR11(3)
-->ZmHOX2a(1)         <---------ARR11(3)
->ARR11(3)            <---------AHL20(1)
--ARR11(3)         --------->AHL20(2)
->ARR14(2)   --------->ANAC58
-------ICU4  ----------->GT1<---------CCA1(2)                                       --------->MYB46(3)
>ZmHOX2a(2)  --------->ANAC58                                           <---------ANAC58          --
--ARR14(2) <--------P --------->AHL20(1)  *TSS                          <---------ANAC58    <<<<<<<<
 
tcatcacgaagcaggtaagtaaaaatatatcttatcttctccaaaactctctcttcgatttcagcaattgcaatggcttccttcacaacaacttcttctt  3847300
                                 <---------At4g35610
                                 --------->O2
                                 --------->At4g35610
                                 ----------->RAV1(2)
                                 <---------ZAT2
                                ------>NtERF2
                            --------->ANAC46                                                   -----
                            --------->ANAC58                   <---------LBD16                <-----
                            --------->ANAC58                 --------->ARR14(2)               ------
                           --------->SPL7                    <---------ARR14(2)               ------
                          <---------MYB52(1)                --------->GLK1(1)                <------
                         <-----------HVH21                  <---------GLK1(1)             <---------ZAT2
                        --------->ANAC46          <---------ALFIN1          <-------TEIL  <---------At4g35610
                       <---------LBD16           <---------ZAT14       <------NtERF2      --------->ZAT2
---->ZmHOX2a(1)        --------->LBD16           --------->ZAT14 --------->LBD16          --------->At4g35610
<TBF1   ------>ZmHOX2a(1)--------->LBD16         <---------REM1(2)   <---------DEAR3(1)------>ZmHOX2a(1)
 
cctcgcttctcctcaaaactcttctccccgtaagccacctgaatcgtttctctacactctctggtatccgcgttggcgattcatggactcctctgctccg  3847400
                       <------NtERF2                   <---------ARR14(2)
                      ------>NtERF2                    --------->ARR11(1)
         ----------->RAV1(2)               --------->TOE1(2)
       --------->MYB46(3)                 <---------ZAT2
     <---------ALFIN1 <-----------HVH21   <---------At4g35610
--------->ARR11(3)   <---------DEAR3(1)   --------->At4g35610
<---------ARR11(3)   <---------ANAC46     --------->ZAT2                                    <-------
---->LBD16           --------->DEAR3(1)---------->DOF2 --------->ARR14(2)                 --------->YAB1
----HSFB2a(2)       <------NtERF2<-------GAMYB       <---------MYB46(3)                  <---------ATHB12
--->ANAC46<---------MYB52(1)   <---------ANAC46  <---------DEAR3(1)                      --------->ICU4
--->HSFB2a(2)     <---------DEAR3(1) <---------YAB1--------->At5g28300              --------->YAB1
---LBD16--------->DEAR3(1)  --------->ALFIN1  ----------->HVH21          --------->MYB52(1) --------
 
gaacatctccaccgctgggtctcggcgtcgagtggcgattgtgaaagctgcgacggtggattcggattactcgtcgaaacggagcaatagcaatgagcag  3847500
                                                                      ------>NtERF2
                                --------->ATHB12                     --------->DEAR3(1)
                                <---------ICU4                  --------->CCA1(2)
                                --------->YAB1                  <------ZmHOX2a(2)
                                --------->ATHB51               --------->AGP1                  <----
                                -------->ATHB1                 --------->ARR14(2)         <---------WOX13(1)
                                <------------ATHB5             <---------ARR14(2)       --------->ATHB12
                                <--------ATHB1                 <---------ARR11(3)      <---------YAB1
                               --------->ICU4                  --------->ARR11(3)    <---------At4g35610
                      <---------ANAC46                     ---------->DOF2           --------->At4g35610
         <---------YAB1        <---------YAB1             =============HOX2a_HOX2a <-----------RAV1(2)
--At4g35610        <--------P  <---------ATHB12           ------>ZmHOX2a(1)       <------ZmHOX2a(2)-
->At4g35610     ------>ZmHOX2a(1)                         ===============================HOX2a_HOX2a
 
agagagacgattatgcttcctggttgcgattacaatcattggctcattgtaatggagtttcctaaagatccagcgccaagtagggatcagatgattgata  3847600
                                 --------->MYB52(2)
                                <-------TEIL
                             --------->HSFB2a(1)                                                   <
                             <---------HSFB2a(1)                                               <----
      --------->ZAT6         <------MYB83 <----------DOF2                                      <----
 --------->TOE2(3)           <------MYB46(1)                                                 <------
 --------->TOE1(3)           --------->HSFC1(2)                                       --------->ANAC58
-----ICU4                    <---------HSFC1(2)     <---------GLK1(2)                 --------->ANAC58
------->P                   <---------TOE1(2) <---------YAB1   <---------MYB46(3)     --------->ANAC46
 
cttaccttaacactcttgctactgttcttggcaggttcgttttcgctttcttattgattctcttcgttgttgaattagttaactaatagacgacatttac  3847700
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AGI:  At1g11420.1   
Description:  agenet domain-containing protein. similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G47230.1); similar to Agenet domain containing protein [Brassica oleracea] (GB:ABD65016.1); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Protein of unknown function DUF724 (InterPro:IPR007930); contains InterPro domain Agenet; (InterPro:IPR008395)
Range:  from: 3844581    to: 3846872    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g11430.1   
Description:  plastid developmental protein DAG, putative. similar to plastid developmental protein DAG, putative [Arabidopsis thaliana] (TAIR:AT3G06790.2); similar to plastid developmental protein DAG, putative [Arabidopsis thaliana] (TAIR:AT3G06790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39088.1)
Range:  from: 3847243    to: 3849162    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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