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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                ----
                                                                                         <---------AHL20(2)
                                                                                        --------->AHL20(2)
                                                        ---------->DOF2               --------->TOE2(3)
      ---------->DOF2                              --------->LBD16               ----------->RAV1(1)
   --------->YAB1                                 --------->HSFB2a(2)           --------->REM1(1)
--------->WOX13(1)                                <---------HSFB2a(2)      --------->ZAT6--------->AHL20(2)
---->DOF2       ---------->DOF2                <---------ARR14(2)        ----------->RAV1(1)  ------
 
agtcattcagaaagtttgagaaagtcaaaccctcttgttgagtaagagactatccagaagaaagaagagtaatctccaacactacaacacattaatttag  3535000
                                                                                         ------>MYB83
                                                                                         ------>MYB46(1)
                                     <---------ICU4                                    ------->GAMYB
                                    --------->ICU4                                    --------->MYB46(3)
                                    <---------ATHB12                                 --------->ANAC58
                     <-----------GT1<---------ATHB51                                 --------->ANAC58
                   --------->AHL20(2)--------->YAB1                               <-------TEIL     -
----->ARR11(3)  --------->ATHB12------>ZmHOX2a(1)           <-----------GT1   --------->ICU4 <------
--->MYB59      <---------YAB1  --------->TOE2(3) --------->ICU4             ---------->DOF2  -------
 
gtcttgtttagtttgtttatgattaaacaagtctcctcaataatgaagtgtcataaataagttatacaatcccttgttgtaaagatgcaaccaaataagt  3535100
                     <----------DOF2                                                             <--
                 <<<<<<<<<<GT-3b                                                             <------MYB83
              <---------AHL20(1)                                                             <------
              --------->ARR11(3)                                                             <------
          <---------AHL20(2)                                                                 <------MYB46(1)
          <---------ICU4                                                                     <------
         --------->AHL20(2)                                                                 --------
      <---------AHL20(2)                                                                    <-------
      --------->AHL20(2)                       ----------->HVH21                            --------
     --------->AHL20(2)               <------MYB46(1)                                       --------
-------->YAB1 --------->AHL20(1)      ----------->GT1         --------->ATHB12              --------
---ANAC55(2)  <---------ARR11(3)      <------MYB83            <---------MYB46(3)            --------
-->ANAC55(2) <---------AHL20(2)      --------->MYB59         <---------AtMYB61 <-------TEIL --------
 
aatgagaaattaataaatatttttcttttaaaaacaaaatttggttatatgtgacacaaatggaatggttgaagttgaaacgttcattttcaagttaggt  3535200
                                                             ---------->DOF2
                                                        --------->ZAT2
                                                        <---------ZAT2
----NtERF2                                              <---------At4g35610
---ANAC58                                               --------->At4g35610
---bZIP60(2)                                           <---------ARR14(2)
---ANAC58                                           <---------ANAC55(2)
->MYB55(2)                                          <---------ANAC58
--AtMYB61                                           <---------ANAC58
->MYB111(2)                                         --------->ANAC55(2)              <---------AHL20(2)
->MYB46(2)                            <---------DAG2<---------ANAC46                 --------->AHL20(2)
->MYB52(2)                            <----------DOF2  --------->ARR14(2)     ----------->GT1
->MYB111(1)                       <---------ALFIN1 <-------TEIL               <---------MYB46(3)
->MYB59                       --------->MYB46(3)--------->CCA1(2)        <---------TOE2(3)  ------>ZmHOX2a(1)
 
ggcatactctaaaattgaatgaacaattgaacatccaccagcttttttcagagatgcgtagctgcaaagtcttgctaatgtttgttaaataaatcctagt  3535300
                            <--------HAHB4
                            --------->AHL20(2)
                            -------->ATHB1                                             *TSS    <----
                            --------->ATHB51                                          <---------AHL20(2)
                            --------->ATHB12                             ----------->GT1    <-------
                            <---------ICU4                             ---------->DOF2--------->AHL20(1)
                            <---------AHL20(2)                   --------->CCA1(2)    --------->AHL20(2)
                           --------->ICU4 ------>ZmHOX2a(1)     <---------ARR11(3)    <---------AHL20(1)
                           <---------ATHB12                 ---------->DOF2          --------->AHL20(2)
     --------->YAB1        <---------ATHB51   ---------->DOF2   --------->ARR11(1) --------->TOE2(3)
----------->GT1        ------------>CBF  --------->TOE1(2)  --------->YAB1        <---------ICU4
 
atgtagaaaaataatccaaattctaatgcaattatttgctaaatcctacaaaagtatatactataaagatttgagaaagaaataaacattaaattatgtg  3535400
                    <---------YAB1
                <-------GAMYB
               ----------->GT1                         <---------------AGL15      --------->At5g28300
               <------MYB46(1)                        <-----------------AG       ----------->GT1
               <------MYB83                           ====================================MADS_MADS
           <---------MYB46(3)                         <-----------------AGL1<---------YAB1
          <---------WOX13(1)                     <---------AHL20(1)       --------------->AGL15
          <---------YAB1                   --------->YAB1                 <---------------AGL15
        -------->HAHB4         --------->YAB1    <---------ARR11(3)       --------->YAB1 --------->MYB59
       <---------YAB1  --------->ZAT6      <-----------GT1               <-----------------AGL3   <-
----------->GT1<---------MYB46(3) ---------->DOF2--------->AHL20(1)      ----------------->AGL3   <-
---TEIL--------->ICU4--------->YAB1 ----------->GT1  <-----------GT1     <-----------------AGL2   <-
--ANAC46--------->ATHB12      <---------AHL20(2) --------->AHL20(2)      ----------------->AGL2-----
 
catatgtaaaatgattgttggttataatactaaataataaagtttataacaatattttacaaatttggaagttgcaactataaatggtaaattcggtcct  3535500
                                             --------->TOE2(2)
                                           -------->P
                                           ------>MYB83                              ------>NtERF2
                                        <---------MYB59                              --------->LBD16
                                        <---------MYB55(2)                          --------->ANAC58
                                        --------->MYB46(3)                          --------->ANAC46
                                        <---------MYB111(1)                         --------->ANAC58
                                       --------->ANAC46                            ------>ZmHOX2a(2)
                                       --------->ANAC58                           --------->ARR14(1)
                                       --------->ANAC58                           <------ZmHOX2a(2)
                                    --------->MYB46(3)                            --------->CCA1(2)
                                <---------MYB59                                  --------->ARR11(1)
                               <---------At4g35610                               --------->ARR11(3)
                               --------->At4g35610  --------->At4g35610          <---------ARR11(3)
                          <------MYB83-------->P    <---------At4g35610          <---------ARR14(2)
                          <------MYB46(1)  ------>MYB46(1)                       --------->ARR14(2)
                          <---------MYB46(3) --------->TOE1(2)                   --------->AGP1
          ---------->DOF2<---------AtMYB61------>MYB83                         ----------->ARR10
      <----------ID1    <--------P  <---------MYB46(2)                     --------->At5g28300
--------TOE2(3)       <-----------RAV1(1) ------>MYB46(1)                 ----------->GT1          -
--------YAB1        <---------ANAC58<---------MYB111(1)                   ------->GAMYB            <
--------TOE1(3)     <---------ANAC58<---------MYB111(2)     <---------ALFIN1 ---------->DOF2       <
->ZmHOX2a(1)        <---------ANAC46<---------MYB52(2) -------->P      --------->MYB52(1)    <------
 
taagattagaagacaaagaagagtcgtgttggtgagctaactacccaacctgtgaagctacccccattctctctcaacggtaaagatccgccattttcac  3535600
                                                             <---------------AGL15
                                                             --------------->AGL15
                                                            <-----------------AGL3
                                                            <-----------------AGL2             <----
                                                            <-----------------AG               -----
                      ------>ZmHOX2a(2)                   <---------ARR14(2)                  ------
                    <---------ARR14(2)                    ------->TEIL                        <-----
------>ZmHOX2a(2)   <---------AGP1                        <---------ARR11(1)           <---------ARR14(2)
-------->GLK1(1)    --------->ARR14(2)                    <-----------ARR10            --------->ARR14(2)
------ZmHOX2a(2)    --------->ARR11(3)                    --------->ARR14(2)    <---------MYB52(1)
---------GLK1(1)    <---------ARR11(3)                   <---------CCA1(2)     --------->TOE2(3)----
-----GT1           <---------CCA1(2)     <---------MYB46(3) <-----------------AGL1--------->MYB52(2)
 
cgatctctgtttcttctcgtttggatctttggaaattttagagtttgttcgttctctctcgtatctcattttggaattgaatcgttagtggatttgatcg  3535700
                                                                                                   <
                                                                                                  <-
                                           ------>ZmHOX2a(2)                                      --
 --------->ICU4                          --------->ARR14(2)                                =========
-----HSFB2a(2)                           <---------ARR11(3)                                <------ZmHOX2a(1)
---->HSFB2a(2)                           <---------ARR14(2)                            <---------ANAC58
>ZmHOX2a(2)             <---------ZAT6   <---------AGP1                                <---------ANAC46
----LBD16    <---------ANAC58        <---------LBD16            <-----------GT1        <---------ANAC58
----->LBD16  <---------ANAC58<-----------GT1        <---------YAB1                  ----------------
 
ggaaatgagtgttttcgcgttcgattagtgtttatcagtctctggatctgtgattttgattttgttttctccagttttcgttttgaaatggcgaggaaga  3535800
                                                                                <---------TOE1(3)
                                                                          ------>ZmHOX2a(2)
                                                                          <-------TEIL
                          <---------REM1(1)                              <------ZmHOX2a(2)
                        <------MYB46(1)                                 --------->AGP1
                        <---------MYB46(3)                              --------->ARR14(2)
                        <------MYB83                                 --------->YAB1
                       <---------MYB46(3)                          <-----------HVH21
                       <---------AtMYB61                          ==============HOX2a_HOX2a
                       --------->MYB111(2)                        ===============HOX2a_HOX2a
                       --------->MYB55(2)          <---------HSFB2a(2)  <---------ARR14(2)
                       <---------DEAR3(1)          --------->HSFB2a(2)  <---------GLK1(2)
------ZmHOX2a(2)       --------->MYB46(2)      <----------DOF2    ------>ZmHOX2a(1)  --------->AHL20(2)
--------ARR11(3)       --------->MYB111(1) --------->DAG2   --------->At4g35610 <---------TOE2(3)
------->ARR11(3)      <--------P  --------->HSFB2a(1)      --------->ARR11(3)  <-----------RAV1(2)
======HOX2a_HOX2a     <---------MYB55(1) ---------->DOF2   <---------ARR11(3)<---------MYB52(1)
-------->ANAC81---------->DOF2    <---------HSFB2a(1)  ---------->DOF2 --------->At4g35610        <-
 
agatcagagagtatgactcaaagaggttggtgaaggaacatttcaaaaggctttctggcaaagagcttcctatcagatccgttcaggtttaaatctgttt  3535900
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AGI:  At1g10660.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64308.1)
Range:  from: 3532429    to: 3535132    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At1g10670.1   
Description:  ACLA-1 (ATP-citrate lyase A-1). similar to ACLA-3 (ATP-citrate lyase A-3) [Arabidopsis thaliana] (TAIR:AT1G09430.1); similar to ACLA-2 (ATP-citrate lyase A-2) [Arabidopsis thaliana] (TAIR:AT1G60810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66107.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70448.1); similar to ATP citrate lyase b-subunit [Lupinus albus] (GB:CAC86996.1); contains InterPro domain ATP-grasp fold, succinyl-CoA synthetase-type (InterPro:IPR013650); contains InterPro domain Succinyl-CoA synthetase-like (InterPro:IPR016102); contains InterPro domain ATP-grasp fold, subdomain 2; (InterPro:IPR013816
Range:  from: 3535388    to: 3538282    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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