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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
NtERF2
------>
NtERF2
--------->
LBD16
--------->
RRTF1(3)
--------->
RAP2.3(3)
--------->
RAP2.3(2)
--------->
RRTF1(2)
--------->
ATERF1(2)
<---------
ATERF1(2)
--------->
DEAR3(1)
--------->
RAP2.6(2)
--------->
DREB2C(2)
--------->
ERF1
<------
NtERF2
--------->
RAP2.3(1)
--------->
RAP2.6(3)
--------->
ATERF1(1)
------>
NtERF2
------>
MYB46(1)
<---------
ATERF1(1)
--------->
ARR14(2)
--------->
LBD16
------>
MYB83
--------->
ANAC46
<---------
ARR14(2)
------>
MYB46(1)
--------->
GLK1(2)
<----------
DOF2
------>
MYB83
--------->
WOX13(1)
<-----------
GT1
--------->
AtMYB61
--------->
AtMYB61
<---------
YAB1
<----------
DOF2
<-
-->
ZAT6
<---------
LBD16
<----------
ID1
<---------
ARR14(2)
------->
TEIL
<---------
DAG2
--------->
ANAC46
taaaaccaatcccgccggcatagaaaacgaccaatctggttcgaattctgaatactaatttgaatctaaactaaaacactttatttccttttacgaaaga
3532000
--------->
MYB52(2)
--------->
WOX13(1)
<------
ZmHOX2a(2)
--------->
MYB52(1)
------->
GAMYB
<---------
MYB52(1)
----------->
HVH21
<---------
MYB52(2)
<------
MYB46(1)
--------->
MYB46(3)
<---------
ANAC46
<------------
AtMYB77
<---------
AHL20(2)
<------
MYB83
<---------
At4g35610
----------->
GT1
--------->
STY1(2)
--------->
At4g35610
<-------
GAMYB
------->
TEIL
<---------
STY1(2)
xxxxxxxxxxxxxxxx
--------
ICU4
<---------
YAB1
<---------
ANAC46
--------->
ZAT2
----------->
GT1
----
ataagtgcaactgacgatcattcagttagttgtttataatgtatatttttaagttccaaacgaggctggctaggtgtataaatgtaaaaaaaaaaaaaaa
3532100
-
<---------
ARR11(3)
=
--------->
ARR11(1)
<
<---------
GLK1(2)
<-
--------->
ARR11(3)
--
--------->
ARR14(2)
--
--------->
ANAC58
<-
--------->
CCA1(2)
<------
MYB46(1)
<---------
AHL20(1)
--------->
ARR14(2)
----------->
GT1
--------->
AHL20(2)
<---------
ARR14(2)
<------
MYB83
<---------
AHL20(2)
---------->
DOF2
--------->
CCA1(2)
>>>>>>>>>
SARD1
<---------
AHL20(2)
--
<----------
ID1
<---------
ARR14(2)
>>>>>>>>>
CBP60g
----------->
HVH21
<---------
CCA1(1)
----------->
GT1
--------->
ICU4
--------->
ARR11(3)
<----------
DOF2
<---------
RVE1(1)
xxx>
smallRNA(si3)
----------->
ARR10
<---------
ARR11(3)
<-----------
GT1
<---------
AHL20(2)
<-
----->
AHL20(2)
--------->
ANAC58
---------->
DOF2
--------->
MYB59
--------->
AHL20(2)
------
aaaatggtgacaaaagataggcaaagatttgcatatgaaaagatgttggaaatttggttatttcctttgacaaattttttttttggatattttatttcaa
3532200
<---------
REM1(2)
===========================
HOX2a_HOX2a
------>
ZmHOX2a(2)
-------->
CCA1(2)
===========================
HOX2a_HOX2a
--------->
YAB1
------
ZmHOX2a(2)
------>
ZmHOX2a(1)
--------
ARR11(3)
--------->
KAN4(2)
---------->
DOF2
------->
ARR11(3)
<---------
KAN4(1)
<---------
MYB52(2)
------->
AGP1
<----------
TaMYB80
--------->
MYB46(3)
----------
ARR10
<------
ZmHOX2a(1)
--------->
KAN4(1)
<---------
At4g35610
------->
ARR14(2)
----------->
GT1
---------->
TaMYB80
--------->
At4g35610
--------
ARR14(2)
----------->
GT1
<---------
KAN4(2)
---------->
DOF2
<-----------
GT1
---->
DOF2
<---------
YAB1
<---------
GLK1(1)
------>
ZmHOX2a(1)
----------->
RAV1(1)
---
agatctacacgatttcatgagtaggaaataagagttggatatttgagcatattcctcctaaaaacataatgcagcaacaaatgttttaacaaagtgacat
3532300
<XXXXXXXXXXXXXXXXXXX
MIR156H
<------
MYB46(1)
------->
GAMYB
<------
MYB83
------>
MYB46(1)
--------->
ANAC58
--------->
MYB59
------>
MYB83
--------->
LBD16
--------->
ANAC46
<---------
ALFIN1
--------->
MYB52(1)
<---------
MYB52(1)
--------->
ANAC58
----------->
HVH21
----------->
RAV1(1)
<---------
MYB52(1)
--------->
DAG2
<---------
At4g35610
--------->
ANAC58
--------->
LBD16
---------->
DOF2
--------->
ATHB12
<---------
MYB52(1)
--------->
ANAC58
<---------
LBD16
<---------
TOE2(3)
<------------
CBF
----------->
RAV1(2)
<-----------
HVH21
<-
------->
DOF2
<---------
LBD16
---------->
DOF2
--------->
At4g35610
<----------
DOF2
--------->
AtMYB61
taaagtccggttatctccggtttaagaaaagtgaaagacggaattgatttgcgctcacacctgttcggttcttttttttttgtcacaccaacagaaatac
3532400
------>
MYB83
<---------
ANAC58
--------
--------->
TOE2(3)
<---------
ANAC58
--------->
ARR14(2)
--------->
TOE1(3)
<---------
AHL20(2)
<---------
ANAC46
<---------
ARR14(2)
<---------
ARR14(2)
--------->
AHL20(1)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
ARR14(2)
--------->
LBD16
<---------
ANAC58
--------->
GLK1(2)
--------->
GLK1(1)
<---------
LBD16
--------->
AHL20(2)
--------->
GLK1(2)
<---------
ARR11(3)
<---------
CCA1(2)
<---------
LBD16
--------->
AHL20(2)
--------->
ARR14(2)
--------->
RVE1(1)
<---------
GLK1(1)
*
TSS
----------->
GT1
<---------
ANAC58
----------->
GT1
--------
<-------
TEIL
------>
ZmHOX2a(1)
<-------
GAMYB
<----------
DOF2
<---------
MYB52(1)
<---------
AtLEC2
--------------
AtSPL8
------>
MYB46(1)
--------->
ICU4
<-----------
RAV1(1)
------>
ZmHOX2a(2)
--------
agaggtacacacatatcctaaaccgaac
aaaaccggggttgtaaaaattaattgcgatttgtggcgattccgtttagatcggataaaaaatctgcacgac
3532500
<----------
DOF2
<----------
DOF2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ARR14(3)
<-----------
ARR10
<---------
ARR11(3)
------>
NtERF2
<---------
ARR14(3)
------>
ZmHOX2a(1)
---------->
DOF2
------>
ZmHOX2a(1)
<---------
At4g35610
<---------
WRKY12
<<<<<<<<<
TBF1
<---------
HSFB2a(2)
--------->
At4g35610
--------->
LBD16
<------------------------
ANAC81
--------->
HSFB2a(2)
<-----------
GT1
==================================
HOX2a_HOX2a
<---------
LBD16
->
ANAC58
===================================
HOX2a_HOX2a
<---------
ANAC46
->
ANAC46
------>
ZmHOX2a(1)
<-----------
HVH21
<-----------
GT1
<---------
TOE2(3)
->
ANAC58
------>
ZmHOX2a(1)
<---------
YAB1
--------->
ARR11(3)
<----------
DOF2
<-----
aaaattttccatcttcctcctcttcctctgccaacttataatcccgtcaaagatctttccttttttcttcttctggtttctttgtggtttcctggaggct
3532600
<---------
ANAC58
--------->
ANAC46
<---------
ANAC58
--------->
ANAC58
<-------
TEIL
--------->
GLK1(1)
--------->
ARR14(2)
--------->
ARR14(2)
<---
<---------
ANAC58
<---------
ARR14(2)
<---
<---------
ANAC58
------->
TEIL
<----------
DOF2
<-----------
GT1
<---------
ANAC46
<---------
ARR11(1)
--------->
ARR14(2)
<---------
ARR11(3)
<---------
ARR14(2)
<---------
CCA1(2)
<---------
ARR14(2)
<---------
At4g35610
<------
ZmHOX2a(1)
<---------
GLK1(2)
<------
ZmHOX2a(1)
------
ARR10
<---------
MYB46(3)
------>
ZmHOX2a(1)
--------->
ANAC58
<---------
TOE2(3)
ctcagcatcttcgagtcgttgcgaggatgcgttagaagagagtctcctctcaatcttcgaatctccaa
gtaatctttctgtattttaggattcacctctc
3532700
<-----
<------
-------
--------->
YAB1
--------
<---------
YAB1
--------
<---------
MYB52(1)
<---------
AHL20(2)
--------->
ARR11(3)
<---------
YAB1
<---------
MYB52(1)
<---------
ARR11(3)
-------
DOF2
--------->
AHL20(2)
--------->
TOE2(3)
<---------
TOE1(2)
<------
------
DAG2
--------->
YAB1
----------->
GT1
<---------
GLK1(2)
<--------
tttttgttctgtttgctcgatacaatgaaattttgaaaaacttcgttaatttatgaaaattgaaatggattctatatcgcaagttcttgttccaattata
3532800
<---------
MYB52(1)
<-------
GAMYB
<-----------
GT1
---------->
ID1
<-----------
GT1
----
YAB1
<---------
ZAT18
<---------
DAG2
---
AHL20(1)
<---------
ARR11(3)
-->
AHL20(1)
--------->
ARR11(3)
->
YAB1
--------->
MYB52(2)
<----------
DOF2
--------->
GLK1(2)
->
AHL20(2)
--------->
DAG2
--------->
ANAC46
<---------
GLK1(2)
---
AHL20(2)
---------->
DOF2
---------->
ID1
----------->
GT1
<---------
DAG2
-
ATHB12
--------->
ZAT18
<---------
DAG2
<-----------
GT1
<--------
ATHB1
<----------
DOF2
<
tttgtccgttagtgcaaaaaggtcttacctttttcgccatcttacagtcttgtgaataattcaaattctaaaactttttgagattcttacagagacattt
3532900
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AGI:
At1g10660.1
Description:
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64308.1)
Range:
from: 3532429
to: 3535132
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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