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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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             <------NtERF2
            ------>NtERF2
            --------->LBD16
           --------->RRTF1(3)
           --------->RAP2.3(3)
           --------->RAP2.3(2)
           --------->RRTF1(2)
           --------->ATERF1(2)
           <---------ATERF1(2)
           --------->DEAR3(1)
           --------->RAP2.6(2)
           --------->DREB2C(2)
          --------->ERF1
          <------NtERF2
          --------->RAP2.3(1)
          --------->RAP2.6(3)
          --------->ATERF1(1)
         ------>NtERF2       ------>MYB46(1)
         <---------ATERF1(1) --------->ARR14(2)
         --------->LBD16     ------>MYB83
        --------->ANAC46     <---------ARR14(2)
    ------>MYB46(1)          --------->GLK1(2)                                      <----------DOF2
    ------>MYB83            --------->WOX13(1)                                  <-----------GT1
  --------->AtMYB61        --------->AtMYB61<---------YAB1                 <----------DOF2        <-
-->ZAT6<---------LBD16 <----------ID1   <---------ARR14(2) ------->TEIL    <---------DAG2--------->ANAC46
 
taaaaccaatcccgccggcatagaaaacgaccaatctggttcgaattctgaatactaatttgaatctaaactaaaacactttatttccttttacgaaaga  3532000
                       --------->MYB52(2)
               --------->WOX13(1)
             <------ZmHOX2a(2)
        --------->MYB52(1)
       ------->GAMYB <---------MYB52(1)
       ----------->HVH21
      <---------MYB52(2)                                            <------MYB46(1)
      --------->MYB46(3)                                            <---------ANAC46
      <------------AtMYB77               <---------AHL20(2)         <------MYB83
     <---------At4g35610           ----------->GT1              --------->STY1(2)
     --------->At4g35610<-------GAMYB ------->TEIL              <---------STY1(2)   xxxxxxxxxxxxxxxx
--------ICU4 <---------YAB1 <---------ANAC46                --------->ZAT2    ----------->GT1   ----
 
ataagtgcaactgacgatcattcagttagttgtttataatgtatatttttaagttccaaacgaggctggctaggtgtataaatgtaaaaaaaaaaaaaaa  3532100
                                                                                                   -
                      <---------ARR11(3)                                                           =
                      --------->ARR11(1)                                                           <
                      <---------GLK1(2)                                                           <-
                      --------->ARR11(3)                                                          --
                      --------->ARR14(2)                                                          --
               --------->ANAC58                                                                   <-
             --------->CCA1(2)                     <------MYB46(1)                     <---------AHL20(1)
            --------->ARR14(2)                     ----------->GT1                     --------->AHL20(2)
            <---------ARR14(2)                     <------MYB83                        <---------AHL20(2)
        ---------->DOF2--------->CCA1(2)        >>>>>>>>>SARD1         <---------AHL20(2)         --
   <----------ID1     <---------ARR14(2)        >>>>>>>>>CBP60g----------->HVH21   <---------CCA1(1)
 ----------->GT1    --------->ICU4    --------->ARR11(3)     <----------DOF2       <---------RVE1(1)
xxx>smallRNA(si3)   ----------->ARR10 <---------ARR11(3) <-----------GT1<---------AHL20(2)        <-
----->AHL20(2) --------->ANAC58   ---------->DOF2 --------->MYB59      --------->AHL20(2)     ------
 
aaaatggtgacaaaagataggcaaagatttgcatatgaaaagatgttggaaatttggttatttcctttgacaaattttttttttggatattttatttcaa  3532200
  <---------REM1(2)
===========================HOX2a_HOX2a
------>ZmHOX2a(2)
-------->CCA1(2)
===========================HOX2a_HOX2a                      --------->YAB1
------ZmHOX2a(2)                                   ------>ZmHOX2a(1)
--------ARR11(3)                              --------->KAN4(2)                       ---------->DOF2
------->ARR11(3)                             <---------KAN4(1)           <---------MYB52(2)
------->AGP1                                 <----------TaMYB80          --------->MYB46(3)
----------ARR10     <------ZmHOX2a(1)        --------->KAN4(1)       <---------At4g35610
------->ARR14(2)   ----------->GT1          ---------->TaMYB80       --------->At4g35610
--------ARR14(2)  ----------->GT1           <---------KAN4(2)  ---------->DOF2     <-----------GT1
---->DOF2    <---------YAB1        <---------GLK1(1)  ------>ZmHOX2a(1)----------->RAV1(1)       ---
 
agatctacacgatttcatgagtaggaaataagagttggatatttgagcatattcctcctaaaaacataatgcagcaacaaatgttttaacaaagtgacat  3532300
                                                                 <XXXXXXXXXXXXXXXXXXXMIR156H
                                                              <------MYB46(1)           ------->GAMYB
                                                              <------MYB83            ------>MYB46(1)
                                  --------->ANAC58           --------->MYB59          ------>MYB83
              --------->LBD16     --------->ANAC46   <---------ALFIN1                --------->MYB52(1)
      <---------MYB52(1)          --------->ANAC58----------->HVH21                  ----------->RAV1(1)
     <---------MYB52(1) --------->DAG2          <---------At4g35610              --------->ANAC58
    --------->LBD16    ---------->DOF2   --------->ATHB12  <---------MYB52(1)    --------->ANAC58
  <---------LBD16   <---------TOE2(3) <------------CBF ----------->RAV1(2)   <-----------HVH21    <-
------->DOF2<---------LBD16  ---------->DOF2    --------->At4g35610<----------DOF2  --------->AtMYB61
 
taaagtccggttatctccggtttaagaaaagtgaaagacggaattgatttgcgctcacacctgttcggttcttttttttttgtcacaccaacagaaatac  3532400
                     ------>MYB83                                 <---------ANAC58          --------
             --------->TOE2(3)                                    <---------ANAC58   --------->ARR14(2)
             --------->TOE1(3)              <---------AHL20(2)    <---------ANAC46   <---------ARR14(2)
          <---------ARR14(2)                --------->AHL20(1) <---------ARR14(2)    --------->ARR11(3)
          --------->ARR14(2)  --------->LBD16               <---------ANAC58         --------->GLK1(2)
         --------->GLK1(1)   <---------LBD16--------->AHL20(2) --------->GLK1(2)     <---------ARR11(3)
         <---------CCA1(2)  <---------LBD16--------->AHL20(2)  --------->ARR14(2)   --------->RVE1(1)
         <---------GLK1(1)  *TSS   ----------->GT1          <---------ANAC58----------->GT1 --------
  <-------TEIL------>ZmHOX2a(1)  <-------GAMYB       <----------DOF2<---------MYB52(1)    <---------AtLEC2
--------------AtSPL8 ------>MYB46(1)    --------->ICU4 <-----------RAV1(1) ------>ZmHOX2a(2)--------
 
agaggtacacacatatcctaaaccgaacaaaaccggggttgtaaaaattaattgcgatttgtggcgattccgtttagatcggataaaaaatctgcacgac  3532500
                                                        <----------DOF2
                                                   <----------DOF2
                                                  ------>ZmHOX2a(2)
                                                 <------ZmHOX2a(2)
                                                --------->ARR14(2)
                                                <---------ARR14(2)
                                                --------->ARR14(3)
                                                <-----------ARR10
                                                <---------ARR11(3)
                         ------>NtERF2          <---------ARR14(3)
                      ------>ZmHOX2a(1)     ---------->DOF2                             ------>ZmHOX2a(1)
                      <---------At4g35610  <---------WRKY12     <<<<<<<<<TBF1           <---------HSFB2a(2)
                      --------->At4g35610--------->LBD16<------------------------ANAC81 --------->HSFB2a(2)
  <-----------GT1     ==================================HOX2a_HOX2a                    <---------LBD16
->ANAC58              ===================================HOX2a_HOX2a                  <---------ANAC46
->ANAC46        ------>ZmHOX2a(1)        <-----------HVH21  <-----------GT1     <---------TOE2(3)
->ANAC58     ------>ZmHOX2a(1)    <---------YAB1--------->ARR11(3)          <----------DOF2   <-----
 
aaaattttccatcttcctcctcttcctctgccaacttataatcccgtcaaagatctttccttttttcttcttctggtttctttgtggtttcctggaggct  3532600
                         <---------ANAC58                      --------->ANAC46
                         <---------ANAC58                      --------->ANAC58
                        <-------TEIL                     --------->GLK1(1)
                      --------->ARR14(2)                --------->ARR14(2)                      <---
                 <---------ANAC58                       <---------ARR14(2)                      <---
                 <---------ANAC58                       ------->TEIL  <----------DOF2   <-----------GT1
                 <---------ANAC46                       <---------ARR11(1)           --------->ARR14(2)
  <---------ARR11(3)  <---------ARR14(2)               <---------CCA1(2)             <---------ARR14(2)
<---------At4g35610  <------ZmHOX2a(1)                 <---------GLK1(2)            <------ZmHOX2a(1)
------ARR10 <---------MYB46(3)             ------>ZmHOX2a(1)   --------->ANAC58   <---------TOE2(3)
 
ctcagcatcttcgagtcgttgcgaggatgcgttagaagagagtctcctctcaatcttcgaatctccaagtaatctttctgtattttaggattcacctctc  3532700
                                                                                              <-----
                                                                                             <------
                                                                                             -------
                                                  --------->YAB1                            --------
                                                 <---------YAB1                             --------
       <---------MYB52(1)                     <---------AHL20(2)               --------->ARR11(3)
     <---------YAB1                      <---------MYB52(1)                    <---------ARR11(3)
-------DOF2           --------->AHL20(2)--------->TOE2(3)                   <---------TOE1(2)<------
------DAG2            --------->YAB1   ----------->GT1          <---------GLK1(2)          <--------
 
tttttgttctgtttgctcgatacaatgaaattttgaaaaacttcgttaatttatgaaaattgaaatggattctatatcgcaagttcttgttccaattata  3532800
    <---------MYB52(1)
   <-------GAMYB              <-----------GT1
---------->ID1       <-----------GT1
----YAB1 <---------ZAT18 <---------DAG2
---AHL20(1)      <---------ARR11(3)
-->AHL20(1)      --------->ARR11(3)
->YAB1--------->MYB52(2) <----------DOF2                                       --------->GLK1(2)
->AHL20(2)    --------->DAG2  --------->ANAC46                                <---------GLK1(2)
---AHL20(2)  ---------->DOF2 ---------->ID1   ----------->GT1         <---------DAG2
-ATHB12  --------->ZAT18<---------DAG2<-----------GT1<--------ATHB1   <----------DOF2              <
 
tttgtccgttagtgcaaaaaggtcttacctttttcgccatcttacagtcttgtgaataattcaaattctaaaactttttgagattcttacagagacattt  3532900
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AGI:  At1g10660.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G62960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64308.1)
Range:  from: 3532429    to: 3535132    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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