Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ARR11(1)       --------->GLK1(1)           <---------At4g35610          >>>>>>>>>TBF1        --------->ARR11(3)       <---------GLK1(1)           --------->ZAT2            >>>>>>>>>TBF1     ----------->GT1    <-- ------At4g35610            <---------WOX13(1)            >>>>>>>>>TBF1      --------->ZAT14     ---- ----->At4g35610         <---------YAB1             >>>>>>>>>TBF1  >>>>>>>>>TBF1    <---------CCA1(2) ----->ZAT14   ---------->DOF2     <---------ZAT2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         ---- ------ZAT14------>ZmHOX2a(1)      --------->At4g35610 >>>>>>>>>TBF1         <---------ZAT14    -----   gcagtagagaactccttcaaaggagttgtaattgctaagctgactcatcaagaagaagaagaagaagaagaagaaacagaacagtcaaatctttagacca  3347500                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                                                                          <---------ARR11(3)                                         <---------WOX13(1)               <---------ARR14(2)       <-                                       --------->ATHB12                   --------->ARR11(3)       --                                      <---------AHL20(2)                  --------->AGP1          <--                                     <---------WOX13(1)                   --------->ARR14(2)    ----- -------ATHB12                    <---------AHL20(2)                      <---------AGP1    --------- -->MYB83                 --------->GLK1(1)                      --------->ARR11(3)--------->HSFB2a(2) -->MYB46(1)             <---------ARR11(3)                      <---------ARR11(3)<---------HSFB2a(2) ---->WOX13(1)           --------->ARR11(3)                     <---------CCA1(2) <---------LBD16 ---   atcagtttccatagccaaaaattcaaagatttctacttaattgattggacttcttcatctacatatatatctactagatctacttctggattaatgagaa  3347600                                                                                            <--------                                                                                           --------->At5g28300                                                                                           <-------GAMYB                                                 ----------->HVH21                        <---------DEAR3(2)                                               --------->YAB1                             <---------MYB46(3) --------ICU4                                  ----------->GT1                <---------LBD16 ------->YAB1                     <---------GLK1(1) <---------bZIP60(1)     --------->ARR14(2) -------ATHB12       <------ZmHOX2a(2)        <---------ATHB12    <----------DOF2        <---------DEAR3(1) ---->GLK1(1)       --------->ARR11(3)        --------->ICU4   --------->ANAC58  <-----------HVH21 >YAB1              <---------ARR11(3) <----------DOF2         --------->ANAC58 --------->LBD16 ------>ICU4    ---------->DOF2   --------->GLK1(1) --------->bZIP60(1)     <---------ARR14(2)   atcatcacaaactagaatcaaagatcaaaccttgagagttcctttgcaatggtgacatcggaaacaagctttgtggtagacccggttatcggcggttaac  3347700                                    <---------ARR14(2)                                    --------->ARR14(2)                                   <---------GLK1(1)    --------->ANAC58                                  ------->TEIL    ===============================HOX2a_HOX2a                               --------->AtLEC2   ------>ZmHOX2a(1)                          --------->ANAC58       --------->TOE2(2)                          --------->ANAC46       --------->TOE1(2)                              -----                         ------->MYC3     <---------ANAC58                                  <------ZmHOX2a(1)                         <-------MYC3     <-------GAMYB --------->ANAC46                 <-----------RAV1(2)        <---------ARR11(3)--------->ANAC58<---------ANAC58                        ---------->DOF2   - <---------ETT(2)       --------->At4g35610 <---------MYB46(3)            =========================HOX2a_HOX2a --------->ETT(2)       <---------At4g35610<--------P   --------->ANAC58  <------ZmHOX2a(2)---------- -MYB52(1)          <-----------HVH21 <---------LBD16  --------->SPL7   <---------GLK1(1)<---------LBD16   ttgtcgacaagataaactgttttgtcacatgccatgcatttctgggttgttcctgcgaacgccattcttgtaagagatcagactaaaagactcaggaaaa  3347800                                                                                       *TSS                                                                                     <---------ANAC46                                                                                <-----------RAV1(1)                                                                               <---------YAB1                                                                             --------->ATHB12                                                                             <--------ATHB1                                                                             --------->YAB1                                                                             --------->ATHB51                                                                             <---------ICU4                                                                            <---------YAB1                                                                            --------->ICU4                                                                            <---------ATHB12                                                                            <---------ATHB51                                                                          --------->WOX13(1)                                                                      ----------->GT1<---------ANAC58 ----->DOF2                                                         <---------GLK1(2)<---------ANAC58 --------->DOF2                            --------->YAB1     ---------->DOF2-------->ATHB1<---------AHL20(2) ->GT1--------->At4g35610           ---------->DOF2       ---------->DOF2------------>ATHB5--------->AHL20(2)   aagaaagaagctcaatagtcttgagagagagagagagataaagaagaataagatgaagatgaaagaaagagattgtcaattattgttgcttgttttaata  3347900                                                 <---------TOE2(3)                    <---------AHL20(2)             ----------->GT1                    ---------->DOF2                       --------->AHL20(2)         --------->AHL20(1)                    <---------AHL20(2)                     <---------AHL20(1)         --------->ARR11(3)                --------->AHL20(2)                         --------->AHL20(1)         <---------AHL20(1)                <---------AHL20(2)                     <---------AHL20(2)        --------->CCA1(2)                  <---------------AGL15       <------------CBF    <---------       <---------ARR11(3)              <---------AHL20(2)       <---------TOE2(3)--------->AHL20(2)       --------->ARR14(2)              --------->AHL20(2)   <----------DOF2   --------->ICU4 <---------PCF5        ------->TEIL<----------DOF2----------->GT1 <------ZmHOX2a(1)--------->YAB1   tggggaccagatatattgaaaaatgaacatgcttcttctttttaaatatttaaagtaaaattcttttaggaaaaattgaaatttttaataaaatgtcaca  3348000                                                 <------MYB83                      <-------GAMYB                                                 <------MYB46(1)                  <---------MYB46(3)    --------->DAG2                           <---------ARR14(2)                <---------ANAC46   ---------->DOF2                   --------->ARR14(2)         ------->GAMYB  <---------ANAC58 --HVH21                             <---------ARR14(2)     --------->MYB46(3) <---------ANAC58 -----   aacaaaaaagttcaagatgagtatcgaattttggatgcaaattcgaatatttggtgtttctgacaaccctagcattgtttttcgtggttgtctaatccac  3348100                                    --------->DOF5.7(2)                                    <---------MYB52(1)                                   --------->TOE1(3)                                 ------->TEIL                                 <---------TOE1(3)                          --------->AHL20(1)                          --------->AHL20(2)                           ---------->DOF2                          <---------AHL20(2)                      ---------->DOF2                      --------->AHL20(2)                     <---------------AGL15                     --------->AHL20(2)  ----------->RAV1(1) --------------->AGL15                     <---------AHL20(2) <----------ID1   --------->ZAT18           ------->GAMYB      --------->CCA1(2)  --------->AHL20(2)              --------->ZAT14  ----------->GT1     <---------ARR11(3)  <---------AHL20(2)              <---------ZAT14 --------->DAG2 ---->ANAC46     --------->AHL20(2)--------->TOE2(3)   --------------->AtSPL8     --------->ANAC46   aaaacaagataagcgatgaataaataaataatttgaacgttagcaacaaaactaaaaactgtactacaaaaagaaaaggtttcaacggcattttttgtgt  3348200                                                   <---------RVE1(1)                                                   <---------CCA1(1)                                                  <---------ARR11(3)                                                  --------->ARR11(3)                                     <---------ARR14(2)      <---------YAB1                 <---------ARR11(3)   <---------ANAC58    --------->AHL20(2)               --------->ARR11(3)   <---------ANAC46  --------->AHL20(2)      <    <---------AHL20(2)         --------->LBD16 ------>ZmHOX2a(1)<---------AHL20(2)                 <-    <---------ICU4            --------->ANAC46 --------->HSFB2a(2)     <-----------GT1       --------    --------->ATHB51       -------->P--------->ARR14(2)   <---------ANAC58--------->TOE2(3) <--------   --------->ICU4         <-----------GT1      <---------HSFB2a(2)<---------AHL20(2)   <----------DOF2   tcttaattatttttgtccaaacttgaagtaacccgtcaatatctgtctcctagatattttgcttatattttttttacattaattcagttcttttatatct  3348300          --------->ATHB51          <---------ICU4          <---------AHL20(2)          --------->AHL20(2)         --------->ICU4                    <---------ANAC58    ----------->GT1                        <---------ANAC55(2)    <---------ANAC55(2)            ----------->HVH21    --------->ANAC55(2)           <---------WOX13(1)    <---------At4g35610          <---------ANAC58   --------->MYB59               <---------ANAC58  <-----------RAV1(2)            <---------AtLEC2 -----------HVH21                <---------ANAC46 --------->CCA1(2) --------ZAT6                 <---------MYB52(1) <---------ARR11(3) ->ARR11(3)                  <---------At4g35610 --------->ARR11(3)       --------->ZAT14 -CCA1(2)<---------YAB1      <-------GAMYB <---------ANAC58    <-----------GT1            --------->YAB1   agagtcaggtaattatttagagaatgcatgcagttgcttgacagtgcgtaagatttacacaaatttttctcaacagtgaaggcaatgctcaatagtcaat  3348400  Previous    Next  AGI:  At1g10200.1    Description:  WLIM1; transcription factor. similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G39900.1); similar to LIM-domain protein [Brassica napus] (GB:ABB51614.1); contains InterPro domain Zinc finger, LIM-type; (InterPro:IPR001781) Range:  from: 3346392    to: 3347887    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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