Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <------NtERF2                                                                           --------->LBD16                                                                           <------NtERF2                                                                          <---------ANAC46                                                   ------->TEIL          <------NtERF2                                                   <---------ARR14(2)    <---------LBD16                                                   --------->ARR14(2)    --------->ATERF1(1)                                                  <---------CCA1(2)     ------>NtERF2                                                --------->ANAC55(1)     <---------ATERF1(1)     <---------LBD16        ------>ZmHOX2a(1)   --------->ANAC58       <---------PCF2  <----------DOF2       ---------->ID1          --------->ANAC58       <---------PCF5 -------ZAT18        <---------TOE1(2)          <---------ANAC55(2)    <---------DEAR3(1) ---->GAMYB         <---------ANAC58 --------->At4g35610          --------->MYB52(1) >ANAC58            <---------ANAC58 <---------At4g35610         ----------->HVH21 >ANAC58  =========================HOX2a_HOX2a  --------->ANAC55(2)  ------->GAMYB >ANAC46  <------ZmHOX2a(2)<---------YAB1 ---------->DOF2       --------->MYB46(3)>>>>>>>>>TBF1   cgcgctctctggatcagacctcgcttgttcctattgttcatcggaagagcacgtatcccaattacatccaacggggccggagaagaagaatacgttggat  3239200                                                       ------->GAMYB                                                       --------->ANAC46                 --------->TOE2(3)                         <---------GLK1(2)             --------->DEAR3(1)            <---------ICU4                        --------->At4g35610            --------->RAP2.6(2)     --------->ANAC58                        <---------At4g35610           --------->MYB46(3)       --------->ANAC58 -----                        <---------ZAT2      --------->ZAT18    <---------ARR11(3)    --------->YAB1           --------->MYB52(1)<---------ANAC46         --------->DEAR3(2)     ---------->DOF2  <------          ----------->HVH21 <---------DEAR3(1)      --------->ARR14(2)    <-----------GT1     -------   <---------MYB46(3)   --------->ZAT2    <---------DEAR3(1)   --------->ARR11(3)   <---------ATHB12  <---------YAB1<---------GLK1(2)      <---------MYB52(2)      <---------GLK1(2)    --------->ICU4   tatggtgattcgctaacagcttctccagcttcggtgtaacaacgaaggcgctagaaaccgccatagattttgagttttacaaagcaataatctcaatatc  3239300                                     <---------ALFIN1                                 --------->ANAC58        --------->ANAC55(1)      --------->ANAC58        --------->ANAC46    --------->ANAC46        --------->ANAC58    <---------HSFB2a(2)            --------->At4g35610        --------->ANAC58    --------->HSFB2a(2) <------ZmHOX2a(2)      --------->ANAC46     <---------LBD16     --------->ARR11(3)                     <-------GAMYB ---->TOE2(3)  --------->ANAC58--------->ARR14(2)          <---------At4g35610       <---------MYB46(3) ---ARR11(3)   --------->ANAC58<---------ARR14(2)   <------ZmHOX2a(1)                ------>ZmHOX2a(2) -->ARR11(3) <---------ALFIN1--------->LBD16  <---------GLK1(1)  ---------->DOF2    <------ZmHOX2a(2)   tcaattacacacgaaacacccccttcgtctccggaacccaaaccctagagatcaggaatcgagcagacaaagagggaatttatgcgatcgttgaagaagc  3239400                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                                <-----------HVH21                                                                              --------->LBD16                                                                            ------>ZmHOX2a(2)                                                                          --------->TCP20                                                                          <---------ARR14(2)                                                                        <---------MYB46(3)                                                        --------->At4g35610 <---------LBD16                                                        <-------GAMYB   ----------->ARR10                                                       --------->MYB52(2) --------->TCP16(1)                                                       <---------MYB46(3) --------->ARR14(2)                ----------->GT1                <---------ANAC58       <-------PIF5            --------->ATHB12                   <---------ANAC58       ------->PIF5<---------ANAC46            <---------ICU4                     <---------ANAC46      --------->At4g35610           --------->ICU4                   <------ZmHOX2a(1)        --------->ZAT2 ----------->GT1           <---------YAB1                <-----------RAV1(2)       <-----------RAV1(2)         <---------ICU4           <---------ANAC46   <---------MYB52(1)--------->ALFIN1           <--         --------->YAB1----------->GT1  <------ZmHOX2a(2)   ---------->DOF2<------ZmHOX2a(2)     ----   gagagagttgataatgatttgaaaaatgaaaaaatggtttggatcaggagcgtgtgttagttgaaagaagcaggtggatccgggtcgggttttaagaaca  3239500                                                                                          -----------                                                                                          <------MYB83                                                                                          <---------MYB46(3)                                                                                          <------MYB46(1)                                                                                         --------->ALFIN1                                                                                         <---------AtMYB61                       <---------WRKY18(1)                                               <---------DEAR3(1)                       >>>>>>>>>>WRKY18                                                 <---------ABI4(1)                       >>>>>>>>>>WRKY62                                                <------NtERF2                       >>>>>>>>>>WRKY40                                                <-------GAMYB                      --------->WRKY12                  *TSS                          ------>NtERF2--                      --------->WRKY45                 --------->ICU4  ----------->GT1<---------MYB46(3)                      --------->WRKY38(1)           <---------YAB1  --------->MYB52(1)--------->MYB55(2)         <---------ARR11(3)               ----------->GT1    ------->TEIL            <---------ANAC46 ---------HVH21     <----------DOF2      --------->ANAC58 <---------YAB1             <---------DEAR3(1) ------->GT1    <---------TOE2(3)        --------->ANAC58 <---------ANAC55(2)       <---------LBD16<-   ggtcaattcaagaccattgaggctttgaccaaaaacaatttggacggaaaaattctaattatgtatgtgaaaacggtatctaaatcggcgggtggtgaac  3239600                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                        --------->ARR11(3)                                                                        <---------ARR11(3)                     --------->ANAC46        <---------ICU4       ----------->GT1                     --------->ANAC58  --------->YAB1         <---------AHL20(2) ----------->GT1                     --------->ANAC58  --------->TOE2(3)     <---------AHL20(2)<---------ANAC46    <---------AHL20(2)------->GAMYB    --------->TOE1(3)     --------->YAB1    --------->ANAC55(2) >GT1     <---------AHL20(2)   <-----------TBP               <---------AHL20(1)<---------ANAC55(2) ----->MYC3      ------>ZmHOX2a(1)  --------->YAB1           --------->AHL20(2)<---------ANAC55(1) ------MYC3     --------->TOE2(3)--------->YAB1         ------------>CBF--------->GLK1(2)          <-   acgtttttattttttattcctcaacgccaagttttttataatcttaatctttgtatgagacaataaaattgaaaaatctatacgtgtaaatactacacat  3239700                                                             ------------------------>ANAC81                                                      ==============================bZIP_DOF                                                      <---------ANAC58                                                      <---------ANAC46                                                      --------->O2                                                      <---------ANAC58                                                      <---------ANAC55(1)                                                      --------->ANAC55(2)                                                      <---------ANAC55(2)                                                      <---------O2                                                      <---------bZIP60(2)                                                      --------->TGA1a                                                      <---------TGA1a              --------->GLK1(2)                       ===================================bZIP_DOF              <---------ARR11(3)                      =========================bZIP_DOF      --------->LBD16                                 <---------bZIP60(1)     ----------->GT1                                  --------->bZIP60(1)     <---------HSFB2a(2)                            <---------TGA2(2)     --------->LBD16                               ----------->HVH21     ---------->DOF2    <---------LBD16                                ----------->TGA1 ---------->DOF2   <---------LBD16                               --------->YAB1 >>>>>>>>>TBF1   ----------->GT1 --------YAB1--------->RVE1(1)          <------ZmHOX2a(1)    >>>>>>>>>TBF1    ---------->DOF2   tatcatccgggaaaaaaatctgagaggcttaacttctatttaggacacaattcatgacgtgaagaagaagaaaagaaaagaaaagaaaaaacaagttttg  3239800                                                                                      <---------AHL20(2)                                                                                  --------->ICU4                                                                                 <---------AHL20(2)                                                                                 <---------AHL20(1)                         --------->ATHB12              --------->TOE2(3)        --------->YAB1          <---------TOE1(3)                          --------->ARR11(3)        <---------YAB1          <---------TOE2(3)                          <---------ARR11(3)      --------->YAB1         --------->MYB52(1)<---------WOX13(1)<---------MYB46(3)           ----------->GT1     -------    <---------YAB1      <---------YAB1 --------->MYB52(1)            --------->AHL20(2)    --------->MYB52(1) <---------YAB1         <---------AHL20(2) <---------MYB52(1)        --------->YAB1   --------->AHL20(2)   tttattatgcttaacgtttgagtaatttgattgcattgacataacgtttgttcaataccttggtttgagaataatatagttataatatttaaacaacgac  3239900                           <---------ICU4           ----------->HVH21    <-----------GT1        --------->ATHB51     <----------DOF2 >GAMYB  --------->At4g35610       <----------DOF2                       --------->At4g35610   atgatataaccagttgacatttgtttgcataattgttctttttcttccttctttctgtaattgtttaaaattagtagcagcgatatgtttttttttttta  3240000           --------->AHL20(2)           <---------AHL20(2)           <-----------GT1        --------->ATHB12                --------->ZAT6        <--------HAHB4       --------->ATHB12        <---------ICU4       <--------HAHB4       --------->ICU4        <---------ICU4                       --------->YAB1       <---------YAB1       <---------YAB1                        <---------ICU4                  ---     --------->YAB1         --------->ICU4                       --------->ICU4                  <---    <---------AHL20(2) <---------At4g35610           ----------->GT1          --------->TOE2(3)  ----   gtatatataatcatttattgttttcagataatcatttaagtttcactaaattggaaggaataaatgaataatgactcaaaccacaatgtagatagacttg  3240100  Previous    Next  AGI:  At1g09940.1    Description:  HEMA2; glutamyl-tRNA reductase. Identical to Glutamyl-tRNA reductase 2, chloroplast precursor (HEMA2) [Arabidopsis Thaliana] (GB:P49294;GB:O04950;GB:Q0WQP1;GB:Q4V3B7); similar to HEMA3, glutamyl-tRNA reductase [Arabidopsis thaliana] (TAIR:AT2G31250.1); similar to HEMA1, glutamyl-tRNA reductase [Arabidopsis thaliana] (TAIR:AT1G58290.1); similar to glutamyl-tRNA reductase precursor [Glycine max] (GB:AAD16897.1); similar to Glutamyl-tRNA reductase 1, chloroplast precursor (GluTR) (GB:P93111); similar to hypothetical protein [Vitis vinifera] (GB:CAN77439.1); contains InterPro domain Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Range:  from: 3236997    to: 3239556    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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