Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ZAT14    <---------ZAT14 ----------->GT1 --------ZAT14 ------->ZAT14 --MYB46(1)                                                                                        -- --MYB83                                                              <---------HSFB2a(2)        <--- --ANAC46                                                             --------->HSFB2a(2)     ------- --ANAC58                                                ---------->DOF2    >>>>>>>>>TBF1     ------- --ANAC58               <---------AtLEC2    --------->LBD16        <----------DOF2           <-------   gtacagtataatgtcactaggtgtttgcattgctgtctctggtttccaggtactctacttgaagcagtactttgagaagaagaagcttatatagagattc  3106100                                                                                  <----------DOF2                                                                           --------->ANAC55(1)                                                                           --------->ANAC58        <---------At4g35610                                                --------->ANAC58 <---------ARR11(3)                     --------->YAB1               <----------DOF2     ----------->HVH21 ------->LBD16                          --------->AHL20(2)         ------>ZmHOX2a(1)  <-----------GT1 ------LBD16                <---------------AGL15             ----------------------->TaNAC69(2) -->GLK1(1)        --------->YAB1    --------->YAB1           <----------DOF2  ------>NtERF2    ----- -->GLK1(2)  <----------DOF2--------------->AGL15         <----------DOF2  --------->ANAC46    ------ --GLK1(2)   ------>ZmHOX2a(1)   ---------->DOF2     <---------At4g35610<---------REM1(2)----------->TGA1   cctgatattcaggtcctttaatgagagtttcttcttaaagaataatattcaattcatctcctttctttcctctttacacgcctcctttttactgacgctg  3106200                                                          <---------GLK1(2)  <-----------GT1                                     --------->YAB1     <---------YAB1    --------->YAB1                            <---------ANAC58      <---------ICU4        --------->AHL20(1)    -------                            <---------ANAC58      --------->ATHB51     --------->YAB1    <---------At4g35610 ---->At5g28300            <---------At4g35610   <---------YAB1        --------->AHL20(2)--------->At4g35610 ----->GT1<---------AtLEC2------->TEIL           --------->ICU4     --------->YAB1   <-----------HVH21   taaaatttttgttcatggattgtttatgtagcttctctctgataagaagtcattatttctgattctgaaataataatattaacttcttgtcatctccaaa  3106300                   <<<<<<<ZML2                --------->HSFC1(1)                                                  --------->ZAT6                <---------HSFC1(1)                                       --------->ANAC55(2)                <---------HSFB2a(2)                                      --------->ANAC46                --------->HSFB2a(2)                         --------->ALFIN1<---------TOE2(2)             --------->GLK1(2)                              ----------------------->TaNAC69(2)      ---------->DOF2                                   --------->MYB52(2) >>>>>>>>>NAP    --------->ANAC58       --------->ARR11(3)         <---------MYB52(1) <---------ANAC55(2)    --------->ANAC58      --------->YAB1            <---------YAB1       --------->ANAC55(1)      <--  --------->MYB52(1)  --------->ATHB12          <---------DAG2           --------->ANAC58         <-- --->DOF2   <---------GLK1(2)     <-------GAMYB <----------DOF2          --------->ANAC58         <--   gtccaaacgaaagagattctagaaccattgatattgggttgtaactgatactttatgttagtttggggctataacacgtaagtttgacagtacaagggtt  3106400                                                            ----------->RAV1(1)                                                            ------>MYB83                                                            ------>MYB46(1)                                                            --------->MYB52(1)      --------->ANAC46                                    --------->MYB46(3)      --------->ANAC58                                    <---------MYB59                           -      --------->ANAC58                                ----------->HVH21                           --- -------YAB1                                     <<<<<<<<<CBP60g      <---------MYB52(1)   ---------- -------TOE1(3)                                  <<<<<<<<<SARD1      <-------GAMYB--------->TOE1(3) < -------TOE2(3)   <---------ATHB12         --------->At4g35610 ------->GAMYB      --------->TOE2(3) <   aagattacaagaaaaaactaatcaaatgggtattacatacaaatcagcccaaatttctgacccaacaggcccgttaagagcaaaccctaatttcaaagag  3106500                                                     --------->ZAT2                                                     <---------ZAT2                                                     --------->At4g35610                                                     <------NtERF2                                  <                                                    <---------RAP2.6(3)                     ---------                                                    ------>NtERF2                           <--------    *TSS  --------->TOE1(3)  --------->AtMYB61     <---------ATERF1(2)                ===============   ----------->TBP           ------->GAMYB<------ZmHOX2a(1)                           ------>ZmHOX2a(2) ----------->TBP<-----------GT1  ---------->DOF2   <---------RAP2.6(2)               ================ --------->AHL20(2)         <---------MYB55(2)     --------->ATERF1(2)               <------ZmHOX2a(2) -------->ARR11(3)          --------->MYB46(3)     <---------RAP2.3(2)              <---------ARR14(2) ------>GLK1(2) --------->YAB1  --------->AtMYB61 --------->RAP2.6(3)               <---------ARR11(3) >DOF2    --------->TOE2(3)-------->P    ----------->GT1                            --------->ARR14(2) ---------ARR11(3)         --------->ANAC58       <---------LBD16                   --------->ARR11(3) ---------AHL20(1)         --------->ANAC58      --------->MYB52(1)            --------->TOE1(2) ----   aatatatataaaccctaatcacatttcgcaaccaccaaagcggaggaaaaatgccggctggacatggagttcgagcgagaacgagggatctgttcgcgag  3106600                                                      <---------DEAR3(1)                                                      <---------DEAR4(1)      <------ZmHOX2a(1)                              <---------ORA47(1)   <---------LBD16                         --------->ARR14(2) ----------DOF2                            <---------ARR14(2) >HSFB2a(2)                                <---------ARR11(3) -HSFB2a(2)                                --------->ARR11(3)  <---------ANAC46 ============HOX2a_HOX2a            ----------->RAV1(2) <------NtERF2                    <------ZmHOX2a(2) ============HOX2a_HOX2a------>ZmHOX2a(1) <------ZmHOX2a(1) <---------ARR14(2)       <---------ZAT18 -->NtERF2   ----------->GT1       -------->P       <-----------HVH21  ----------->HVH21--------->ARR14(2)   gcctttcaggaagaagggttacattcctctatcgacttacctgaggaccttcaaggtcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaag  3106700                                                             <---------MYB52(1)                                                           <---------ANAC46                                                           --------->O2                                                           --------->RAP2.3(3)                                                           --------->RAP2.3(2)                                                           --------->DEAR3(1)                                                           <---------DEAR3(1)                                                           <---------O2                                                          <------NtERF2                                                          --------->ATERF1(1)                                                          --------->RRTF1(1)                                                          --------->DEAR4(2)                                              --------->TGA2(2)                                             <-----------HVH21<---------DEAR3(1)                                            --------->ANAC58<-----------HVH21                                            --------->bZIP60(2)<---------DEAR3(2)                                            --------->ANAC58------>NtERF2                                       --------->HSFB2a(2)--------->ERF1                                      <---------LBD16    <---------ATERF1(1)                                    --------->ARR14(2)   ------>NtERF2                                    <---------ARR14(2)  <---------DEAR3(1)                    =======                                    ------->TEIL    ------>MYB46(1)                           ------>ZmHOX2a(2)                                    <---------ARR11(1) <---------ABI4(2)                    <--------                                   <---------CCA1(2)------>MYB83               --------->MYB52(1)                                   <---------ARR14(1)  --------->ZAT18        ------->GAMYB ---------                         <---------SPL7<---------HSFB2a(2)--------->RAP2.3(1)<---------MYB52(2)                       --------------->AtSPL3<-----------TGA1<------NtERF2   --------->MYB46(3)            <---------ARR11(3) ----------------------->TaNAC69(2)--------->ALFIN1       <---------At4g35610   ggtatgcctcacaagttctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaagtcaacaaacaggtctgatgatctc  3106800                                                                                            <--------     --------->TOE2(3)          --------->ARR14(2)                    --------->ATHB12    --------->ATHB12     --------->TOE1(3)          <---------ARR14(2)                  <---------MYB52(1)   <---------YAB1 ============================HOX2a_HOX2a                       <---------AGP1          <---------ANAC55(2) -ARR11(3)            ------>ZmHOX2a(1)                   <---------MYB46(3)<---------TOE2(3) >ARR11(3)  <----------DOF2    <------ZmHOX2a(1) <----------DOF2 ------>ZmHOX2a(2)     --------->ANAC55(2)   tcacttcccttaaacttttgtgtccttgaattaggatttgagcttgttgtgctatttggattgttgatctgttgatttgatgttgaaatatgtgattgag  3106900                                                                      ------>ZmHOX2a(2)                                                                    --------->ARR14(2)                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                                                                    <---------ARR14(3)                                                                    <---------ARR14(2)                                                                    <-----------ARR10  <------MYB83                                       --------->MYB52(2) <---------CCA1(2)  <------MYB46(1)                        <---------At4g35610        <---------AGP1               <--- <---------TOE2(3)                       --------->At4g35610        --------->ARR14(3)         <----- --------->MYB59            --------->ZAT14        <---------MYB52(1)<------ZmHOX2a(2)        ------- -WOX13(1)                  <---------ZAT18    <---------GLK1(2)---------->DOF2             <--------   tattaggtttgtagaatgtaaaccttctactgtgctccaatttagctcagattgttagttttggctcaaagatcttatcttctattatgcagtagtgtgg  3107000  Previous    Next  AGI:  At1g09580.1    Description:  emp24/gp25L/p24 family protein. similar to emp24/gp25L/p24 family protein [Arabidopsis thaliana] (TAIR:AT1G57620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82472.1); contains InterPro domain emp24/gp25L/p24; (InterPro:IPR000348); contains InterPro domain GOLD (InterPro:IPR009038) Range:  from: 3104590    to: 3106292    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g09590.1    Description:  60S ribosomal protein L21 (RPL21A). Identical to 60S ribosomal protein L21-1 (RPL21C) [Arabidopsis Thaliana] (GB:Q43291); similar to 60S ribosomal protein L21 (RPL21C) [Arabidopsis thaliana] (TAIR:AT1G09690.1); similar to 60S ribosomal protein L21, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABF93903.1); similar to unknown [Populus trichocarpa] (GB:ABK94292.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73497.1); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain Ribosomal protein L21e; (InterPro:IPR001147) Range:  from: 3106504    to: 3107774    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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