Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 --------->AHL20(1)               <---------AHL20(1)               --------->AHL20(2)              --------->YAB1             <---------ATHB51             <---------ATHB12       ------>ZmHOX2a(2)      <---------GLK1(1)      <------ZmHOX2a(2)      --------->GLK1(1)     --------->ARR11(3)     <---------ARR14(2)                                                    --------->YAB1     <---------ARR11(3)                                              --------->TOE2(3)     --------->ARR14(2)                                             <-------TEIL  <---------TOE1(2)                                                <------ZmHOX2a(2) ------>ZmHOX2a(1)                                                 ====================HOX2a_HOX2a --------->LBD16<---------YAB1                                    --------->AGP1------>ZmHOX2a(1) ---------LBD16<---------AHL20(2)                                 --------->ARR11(3) -------->TOE1(2)                                                 <---------ARR11(3)------>ZmHOX2a(2) --------->RAV1(2)                                          <-------TEIL--------->YAB1----------->RAV1(1)   ttcctgggatctccaattataatttagaaatcaaaaaccccagacaaaccaaaatcaacaaattcatagatccataataatcctgatccaacatttgaga  2976400                                   <---------AGP1                                   <---------ARR11(3)                                   --------->ARR14(2)                                   <---------ARR14(2)                                   ------->TEIL                                   --------->ARR11(3)                                  <---------CCA1(2)                      <---------GLK1(1)                      --------->GLK1(1)                     --------->ARR11(3)                     <---------ARR14(2)                     <---------ARR11(3)                    ========================HOX2a_HOX2a                    <------ZmHOX2a(1)------>ZmHOX2a(2)                                     --------->ANAC58        <---------At4g35610   <---------ANAC46                                             --------->ANAC58        --------->At4g35610   <---------AtLEC2              --------->TOE2(3)              --------->ANAC46    <-----------HVH21--------->ARR14(2)           --------->YAB1                       ------>ZmHOX2a(2)   acaaactatcagatgaaaacgaggatatcgtagcatggatcttaaactcgtagcataaatcacattaaaactcaaattgaagaaatagatcgcaagccag  2976500                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                            <------NtERF2                                                                                            ---------                                                                                          <---------DEAR3(1)                                                                                          --------->ALFIN1                                                                                          <---------ANAC46                                                                                         <---------LBD16                                                                                         --------->ATERF1(1)                                                                                         ------>NtERF2                                                                                         <------NtERF2                                                                                        <---------RRTF1(1)                                                                                        ------>NtERF2                                                                                        <---------RAP2.3(1)                                                                                       <---------RRTF1(3)                                                                                       <---------RAP2.3(2)                                                                                       <---------DEAR3(1)                                                                                       <---------RRTF1(2)                                                                                      <---------LBD16                                                                                     <-----------RAV1(1)                                                                          ===========================                                                                          ===========================                    <------ZmHOX2a(1)                                     ------>ZmHOX2a(1)<---------ATERF1(1)         --------->ANAC46                   <---------REM1(1)             <---------HSFB2a(2)  <-----         --------->ANAC58          <---------ZAT6                         --------->HSFB2a(2)<-------         --------->ANAC58      --------->ZAT14                  ---------->DOF2   --------->MYB52(1)-   --------->MYB52(1)          <---------ZAT14        --------->MYB59     --------->LBD16<---------At4g35610   aacacaaacagacgcatcatcaggaagatagagtatagagatagagatgtagaaattagataccatcaaagcgctcctcgaaaataactgcggcggaggc  2976600                                                                                        <---------ARR11(3)                                                                                     --------->LBD16                                                                                    --------->LBD16                                                                                    --------->ANAC46                                                                                   --------->LBD16                                                                             --------->HSFC1(2)                                                                             <---------HSFB2a(1)                                                                             <---------At4g35610                                                                             <---------HSFC1(2) ----->ZmHOX2a(2)                                                            --------->HSFB2a(1) -------->ANAC58                          <--------HAHB4                     <---------ZAT2 -----ZmHOX2a(2)                          <---------ICU4                     --------->At4g35610 >ATERF1(1)                               --------->YAB1                     --------->ZAT2 =====HOX2a_HOX2a                     <------ZmHOX2a(1)                     <-----------ARR10 ======HOX2a_HOX2a           <---------TGA1a                             ------>ZmHOX2a(2)  <-------- -NtERF2                     --------->O2--------->ICU4                 <------ZmHOX2a(2)   --------- --DEAR3(1)    --------->YAB1<---------O2<---------ATHB12              <---------ARR14(2) <---------- -------->ANAC58           --------->CCA1(2)    --------->ANAC46       --------->ARR14(2)<------ZmHOX2a(2)   gatcgcaacaagaccgataagaattagagagacgaggctaggaatcattttcgccattgctaaaaaaaactcagatcggagcttccccgagatcagatga  2976700                                                       <---------At4g35610                                                     --------->ZAT18                                                    *TSS                  <---------At4g35610          --------->STY1(2)             <---------LBD16                  --------->ANAC58  --------->ARR11(3)                          --------->ANAC58                                      -  <---------ARR11(3)                       --------->At4g35610                           <---------ANAC46  <---------------AtSPL8                   --------->ZAT2<----------DOF2              --------->bZIP60(2)  --------------->AtSPL3    <---------At5g28300<---------STY1(2)                <---------TOE2(3)   < -At4g35610 ----------->RAV1(2)          <------ZmHOX2a(1)               <---------AHL20(2)     ----- >At4g35610<---------ARR11(3)          --------->ALFIN1--------->At4g35610  <---------YAB1      <---- -RAV1(2)  --------->ARR11(3)       <------ZmHOX2a(1)<---------ZAT18     --------->AHL20(2)----------   tgaagatgtacaagacctggagcttatatataccgcgaggagaggagctagcaagtgagctttgctctcatggattttattttaggctacgtcgtgtaaa  2976800                                     --------->CCA1(2)                                    --------->ARR14(2)                                    <---------ARR14(2)                                   --------->At4g35610                               <-----------HVH21                               <-----------TGA1                              <---------ANAC55(2)                              --------->ANAC46                              --------->ANAC58                              --------->ANAC58                              <---------O2                              --------->TGA1a                              <---------TGA1a                              --------->ANAC55(2)                         --------->At1g77200                         ===============MYC_MYB                         ----------->HVH21             ------------>CBF --------->O2           <-----------------AGL1  <---------At4g35610       --------->ANAC58  ------->GAMYB       --------->bZIP60(2)    --------->bZIP60(2)       --------->O2      --------->ANAC46       --------->ANAC55(1)    --------->ANAC55(1)       <---------ANAC55(2)  <---------ALFIN1       --------->ANAC46 ================MYC_MYB       --------->ANAC58 --------->MYB46(3)   ------>NtERF2        --------->DEAR3(2) -------->At4g35610     <------------AtMYB77              <---------bZIP60(2) ---------At4g35610   --------->MYB52(1)           <---------TOE2(3) ---->ARR14(2)     <---------ANAC55(2)         <------------CBF -----ARR14(2)     --------->ANAC55(2)<-------TEIL--------->YAB1                                 <--- ->GT1 --------->ANAC55(2)<-----------HVH21  <---------YAB1                              ---------->DOF2   tctgcagccacgtaatccaataggtaaccgacacgtcagatacatttgtcattgagaatgacatgtcgttatagtattggataaaacgggagaaagaagg  2976900                                                          ----------->GT1                                                          <---------ANAC46                                         --------->AHL20(1)                                         <---------ARR11(3)                                         --------->ARR11(3)                                     ---------->DOF2     <---------DEAR3(1)                                 <-------MYC4           <---------ABI4(1)                                 <-------MYC3           --------->ZAT18                                 ------->MYC3        <------MYB83                                 ------->MYC4        <---------DEAR3(2)                                 ------->MYC2        <------MYB46(1)                                 <-------MYC2        <---------MYB46(3)                                <---------ANAC55(2) --------->MYB46(2)                                <---------ANAC46    <---------DEAR3(1)                                --------->ANAC55(2) <---------AtMYB61                                <--------ABF1       --------->MYB111(2)                                ================bZIP_DOF<---------ZAT14                                --------->TGA1a     --------->MYB55(2)                                <---------O2        --------->ALFIN1                           ----------->HVH21        --------->MYB111(1)                         --------->CCA1(2)         <---------MYB52(1)                --------->ANAC58==========================MYC_MYB            --------->TOE1(3)   <---------TGA1a    <---------MYB55(1)            --------->TOE2(3)   --------->O2       <--------P     <--------HAHB4     --------->ARR11(1)       <---------MYB46(3)                           <------     <---------ICU4 ---------->DOF2--------->REM1(2)<---------MYB46(3)                   <---------ANAC46     --------->ATHB51   <---------ARR11(3)--------->CCA1(2)--------->At5g28300       <----------DOF2    --------->ICU4  ======================bZIP_DOF<-------GAMYB                  --------->ZAT18 ------DEAR3(1) --------->ANAC58============================MYC_MYB              <---------ZAT18 <---   ctgtgcataattagccttaagcaaaagatttgacacgtgtaaagatattagcggttggtgcggtgatataaacaaaaaacaagtgtgcttctcgtggaga  2977000                                                        <-------GAMYB                     ------>ZmHOX2a(2)                 <---------MYB46(3)                    <------ZmHOX2a(2)                  --------->MYB111(2)                    <---------GLK1(1)                  <-----------RAV1(1)                    --------->GLK1(1)                  --------->MYB52(2)                   --------->ARR14(2)                  --------->MYB55(2)                   <---------ARR11(3)              <------MYB46(1)                   <-----------ARR10            <---------ANAC58                 <---------MYB52(1)                   --------->ARR11(3)           <---------ANAC58                <---------RAP2.6(3)         ---------->DOF2<---------LBD16   --------->AHL20(1)                   <---------MYB46(3) <---------ZAT6    <---------ARR14(2)     <---------AHL20(1)                 <---------At4g35610 ----------->GT1   <---------AGP1         --------->ARR11(3)             ------>ZmHOX2a(2) ---ANAC46         <---------ARR14(3)    --------->AHL20(2)            <---------ARR11(3) ------ZAT14      <---------CCA1(2)----------->GT1 <------MYB83    --------->ANAC55(2)       ------->GAMYB   gtagagtaaacaaaagaagcagatctctcgggtgttttagtaaatatatagcttggtttgttggattaaacgtgatctcagccgttagattccaactgaa  2977100                                                                                   <---------ARR11(3)                                                                                   --------->ARR11(3)                                <------NtERF2                                   <---------YAB1                             <---------PCF2                               --------->AHL20(2)                          --------->ALFIN1                                <---------AHL20(2)                        <---------ANAC58                                 --------->AHL20(2)                        <---------ANAC46        <---------ANAC46   <---------AHL20(2)                  <---------HSFB2a(2)         <---------ANAC46    --------->AHL20(2)  <----------DOF2 --------->AHL20(2)     <---------ANAC58  <---------WOX13(1)   ----------->GT1--------->YAB1 <---------AHL20(2) ---------->DOF2  <------ZmHOX2a(1)        ----------->GT1 --------->AHL20(2)   tttttaaatctacaaaaattctaaaagcgtgggccgagaggaagattgatgtgtgtattttgggccgataaaattttaaattataaatctttttgtgttg  2977200                                               <---------ANAC46                                               <---------ANAC58                                         <-----------ARR10                    ---------->DOF2                        <---------ANAC58 <---------ARR11(3)             --------->ANAC58                        <---------ANAC58 --------->ARR14(2)             --------->ANAC58                        <---------ANAC46 --------->GLK1(2)       --------->YAB1         <---------ANAC46   ---------->DOF2    <---------ANAC58  <---------ICU4    ---------->DOF2   atggtttttttgtgtgaagaagattagcgtaaaagctactcaaaatctgacttggattcaaatttgataatgacacccattgaagcaaagttttttcaaa  2977300  Previous    Next  AGI:  At1g09210.1    Description:  calreticulin 2 (CRT2). Identical to Calreticulin-2 precursor (CRT2) [Arabidopsis Thaliana] (GB:Q38858;GB:O04152;GB:O80486;GB:Q94AW7); similar to CRT1 (CALRETICULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G56340.2); similar to CRT1 (CALRETICULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G56340.1); similar to Calreticulin precursor (GB:P93508); contains InterPro domain Calreticulin/calnexin, P; (InterPro:IPR009033); contains InterPro domain Calreticulin/calnexin; (InterPro:IPR001580); contains InterPro domain Endoplasmic reticulum targeting sequence; (InterPro:IPR000886); contains InterPro domain Concanavalin A-lik Range:  from: 2972844    to: 2976752    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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