Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->AHL20(1)                      <---------AHL20(1)                      --------->AHL20(2)                      --------->ARR11(3)                                                      <------                     --------->CCA1(2)                                                        <------                    --------->ARR11(3)                                                        <------ >ANAC58            <---------ARR11(3)                                               --------->YAB1 >ANAC58   --------->DAG2  <---------AHL20(2)               <-----------GT1         <---------ATHB12 >ANAC46  ---------->DOF2 --------->AHL20(2)             <---------ICU4           --------->WOX13(1) -------------->ANAC81<---------ARR11(3)             --------->ZAT6       <----------DOF2 <---------HSFC1(2)   aaaacataaacaaaaagctcaagatatattatatatggactagacagacactatgacactaattactaaacacttactttcttccaatcagacgtttcgg  2931400                                           --------->At4g35610                                           --------->HSFC1(2)                                           <---------At4g35610                     <---------ANAC58      --------->ZAT2                     <---------ANAC58      <---------HSFB2a(1)         <---------ZAT18                   <---------HSFC1(2)  <------MYB83      --------->HSFC1(2)                   --------->HSFB2a(1) <------MYB46(1)      <---------HSFB2a(1)     <---------WOX13(1)              --------->MYB59      <---------MYB46(3)     <---------ANAC46                <-------TEIL                 -----------      <---------HSFC1(2)     <---------ANAC58               <---------MYB52(1)          ----------->GT1 ---ANAC46      --------->LBD16         <---------At4g35610<---------SPL7        ------->GAMYB ---ANAC58     <---------ANAC46  <---------GLK1(2)--------->LBD16              --------->ANAC58 ---ANAC58    <---------LBD16<---------ANAC58    --------->LBD16               --------->ANAC58   gtcgaagatggttcgctccgggttcttggctgcttgattcttagcagcttccccgatgagacgttcggtatcagtaaatgcaacccaagatggtgtaatt  2931500                                                                                                   --                                                   ------>MYB46(1)                                 <-                                                   ------>MYB83                                   ---                   <---------YAB1                 ----------->RAV1(1)                     <----------            <---------MYB52(1)    <---------MYB46(3)<---------ALFIN1                      <---------SPL7    <---------ANAC58         <-------MYC3        --------->AtMYB61                       --------->DEAR3(1)    <---------ANAC58  <---------GLK1(1) --------->YAB1                                 <---------At5g28300    --------->TOE2(3) --------->GLK1(1)<---------YAB1      ------->TEIL             <-----------HVH21 >GT1     ------>ZmHOX2a(2)  ------->MYC3 <---------WOX13(1)                   <------ZmHOX2a(2)  <--   ctgtttccttgatcgtttgctatgatttccacatgtttgttatgatagacaccaacacatgaatatgtagtccctagatcgatccctatcaccgtcccca  2931600                                                        --------->AHL20(2)   <---------At4g35610                                 --------->AHL20(2)                  --------->TOE2(3) ------->ARR14(2)                                --------->YAB1                           --------->ANAC58 --------ARR14(2)                        --------->At4g35610     --------->ANAC58         --------->ANAC58 ------------------>WRI1              <---------At4g35610        --------->ANAC58         ----------- -HVH21                               <---------ZAT2 --------->TOE2(3)              <------ZmHOX2a(1) -------GLK1(2)                    ---------->DOF2 <-------TEIL---------->DOF2      <XXXXXXXXXXXXXXXX   gtttctgctcttcgccttctattgccaaacttgacatcaaagctgctccaatattcattaaaaaatcaagcactatagcataaataggagaaacgtcaaa  2931700                                                 --------->ANAC58       --------->At4g35610                                                 --------->ANAC55(1)    <---------At4g35610                                                 <---------ANAC55(2)<-----------HVH21                               --------->ANAC46  --------->ANAC46  --------->bZIP60(2)                           <-----------GT1       --------->ANAC58  --------->ANAC46                 <                       <-----------ARR10     ------>MYB83 <----------DOF2               <---------ANAC58 >GT1              --------->YAB1            ------>MYB46(1)      ------>ZmHOX2a(1)     <---------ANAC58 XXXXMIR870       <---------YAB1<-----------HVH21--------->ANAC55(2)<-----------TGA1    --------->TOE2(3)   ttccaaaaaatgtgtgttttatgagaattttaccagtcagaaaaaccaaacacgcaatagctttgttcctcgtcatcttcgctgtgttttccttgataaa  2931800                                            <---------AHL20(2)                                           *TSS                                         --------->MYB52(2)                                       <---------MYB52(1)          <---------MYB46(3)         <---------MYB46(3)                      --------->AHL20(2)        <-------GAMYB                --------->MYB52(2)                    <-----------TBP    -------     <-----------GT1               <---------MYB52(1)               ---------->ID1           <------- ---------ICU4                 ------>ZmHOX2a(2)                 <-------TEIL<---------AHL20(2)   aatcatttttcgttgttgagaactcttcttcgatctcgtttgttagtttatttggaagagtatgaagttcgtcgtctatttatatgtgcttcagtatgat  2931900                                                 --------->TOE2(3)                  =================                                                 --------->TOE1(3)                  <----------DOF2                                           --------->ANAC55(2)                  ------>ZmHOX2a(1)                                           <---------O2                   <------NtERF2                                           --------->bZIP60(2)            --------->ANAC58                                           <---------ANAC55(2)            <---------ATERF1(1)     ---                                           <---------TGA1a                --------->ANAC58       ====                                           --------->ANAC46              <---------ZAT18         ----                              <---------ATHB12  --------->At4g35610      --------->ZAT18      -------                            --------->WOX13(1)  <---------At4g35610      ------>NtERF2        -------                          ------------>CBF --------->ANAC58             <---------ANAC58      <------                       ------>ZmHOX2a(1)   --------->O2                 <---------ANAC46      -------                   --------->ZAT18         --------->ANAC55(1)          <---------ANAC58      -------                   <---------ZAT18         --------->TGA1a           <---------DEAR3(1)       ------- -->ATHB12      <---------ANAC58           --------->ANAC58       <-----------RAV1(1)   <-----------GT1 --YAB1         <---------ANAC58      ----------->HVH21 ----------->GT1<------NtERF2<---------DAG2---   tcgtatttagcctcggtagagtgtcctctccaatcacttcttgacacgtaagcttaatgggttattttgtgttggcgcgctccttactttttacacacgt  2932000                      <-------MYC3                      ------->MYC3                      ------->MYC2                     --------->ANAC46                     --------->ANAC55(1)                     --------->ANAC55(2)         --------->YAB1----------->HVH21        <---------ATHB12      --------->WOX13(1)    <---------MYB59  <---------ANAC55(2)    --------->MYB46(3)<-------MYC2 <-----------TGA1   --------->ANAC58  <---------TGA1a   --------->ANAC58  --------->TGA1a ==============================bZIP_DOF ------------>AtSPL8 --------->ANAC58 ==============================bZIP_DOF ------>DOF2         --------->bZIP60(2) -->ANAC46           <---------O2  <-----------HVH21 -->ANAC55(1)        --------->O2 --------->YAB1 ---ANAC55(2)        --------->ANAC58         --------->GLK1(2) -->ANAC58         ------------->DYT1         <---------ARR11(3) -->ANAC55(2)     <---------ARR14(2)          --------->ARR11(3)           <---------TOE2(2) -->ANAC58   --------->ANAC58 <---------AHL20(2)             <-----------GT1   ------->TEIL ------>DAG2 --------->ANAC58--------->AHL20(2)        <---------TOE2(3)   <---------TOE1(2)        -   aaagtacccaatcacaagcagacacgtgacattaaatcgtcatcgcaaaatctttcaaaggttttacgacttcttcgtatgtatgtatagttatccaaaa  2932100                                                                                                   <-                             <---------TOE2(3)                                                     --             --------->YAB1 <-----------GT1                                                       ---          --------->YAB1<---------ICU4                           <---------RVE1(1)                <--         <---------YAB1 -------->ATHB1                           <---------CCA1(1)     <---------AHL20(1)        --------->AHL20(2)<---------YAB1                        <---------ARR11(3)     --------->AHL20(2)       --------->YAB1  --------->AHL20(2)              <---------ICU4                  --------->AHL20(1)      <---------YAB1   <---------ATHB51                --------->ATHB51                <---------AHL20(2)    <---------ICU4     <---------AHL20(2)              -------->ATHB1      <---------ZAT14        ---    --------->YAB1     --------->ICU4                  <--------HAHB4   <---------ANAC58          <--    <--------HAHB4  --------->AHL20(2)          <---------AtLEC2--------->ARR11(3)  --------->YAB1---   <---------YAB1   <---------AHL20(2)         <-------TEIL     <---------GLK1(2)  --------->AHL20(2) <---------ICU4     --------->AHL20(1)       ------->MYC3  <---------AHL20(2)------->TEIL         <-- --------->YAB1    <---------AHL20(2)        <-------MYC3<---------YAB1 <---------ANAC46        ----- -------->ICU4     --------->AHL20(2)  <-----------GT1--------->ICU4    <---------ANAC58   --------->AHL20(2)   caattatcattataatcaaaattaaattattaacaatgtttttatcacatgcatgaattattaaaagatttttttcgtgtaccgattaataaaataaaaa  2932200         <---------ICU4        --------->ICU4        <---------YAB1                                                             ----------->GT1    <-----------TGA1                                                             <---------bZIP60(2)   <---------ANAC58                                                              <---------ANAC46   <---------ANAC58                                                              ----------->GT1 --------GLK1(1)                                                                <---------AtMYB61 ------->CCA1(2)                                                              --------->ALFIN1 ------>ARR14(2)                                                             <-----------HVH21 -------ARR11(3)                                                          <---------LBD16 ------>ARR11(3)     --------->YAB1        --------->AHL20(2)           <---------ARR14(2) -------ARR14(2)     <------ZmHOX2a(1)   <---------TOE2(3)              ------->MYC2 ------>ARR11(1)    ----------->GT1<---------YAB1  <---------ZAT14      <-------MYC2 -------GLK1(2)    <---------TOE2(3)  <---------YAB1                    ------->MYC3 ------>ARR10<-----------GT1  <----------DOF2     <---------ZAT6        <-------MYC3    --------->ICU4   gatttgcgtcataatttacataaggataatttcttttgttattaatgaattagtgtaatgccaaaactactgcatatgcggtgaggtgtaatatttggaa  2932300  Previous    Next  AGI:  At1g09080.1    Description:  BIP3; ATP binding. similar to BIP (LUMINAL BINDING PROTEIN), ATP binding [Arabidopsis thaliana] (TAIR:AT5G42020.1); similar to BIP1, ATP binding [Arabidopsis thaliana] (TAIR:AT5G28540.1); similar to BIP (LUMINAL BINDING PROTEIN), ATP binding [Arabidopsis thaliana] (TAIR:AT5G42020.2); similar to luminal binding protein [Pseudotsuga menziesii] (GB:CAA89834.2); similar to Luminal-binding protein 4 precursor (BiP 4) (78 kDa glucose-regulated protein homolog 4) (GRP 78-4) (GB:Q03684); similar to unnamed protein product [Vitis vinifera] (GB:CAO17540.1); contains InterPro domain Heat shock protein 70 (InterPro:IPR013126); contains InterPro domain He Range:  from: 2929220    to: 2931843    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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