Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------WOX13(1)                    --------->ATHB12                 <---------ANAC58                                             <-------TEIL                 --------->ANAC55(2)       ------->TEIL--------->AHL20(2)  <------MYB83 --TEIL          <---------ANAC58   <---------TOE2(3) --------->AHL20(2)   <------MYB46(1)       <--- -MYB46(3)---------->ID1--------->YAB1<------ZmHOX2a(1)<---------AHL20(2) --------->MYB59 <---------AHL20(2)   atcgcctaatttgttgtttacttgattgataaatgtttgaggatgaaactgtatcatttatttttctcaaaattgtttggttcatgacctatataatcca  2712500                                     --------------->AGL15                                     <---------------AGL15           <---------YAB1           <---------ANAC55(2)          <---------AHL20(2)        --------->ANAC55(2)          --------->AHL20(2)        <-----------------AGL1        <---------AHL20(2)          <-----------------AGL3                    --------->ANAC46        <---------YAB1              <-----------------AGL2               <-----------GT1        --------->AHL20(2)    <-------TEIL                           --------->AHL20(1)       --------->TOE2(3)<---------AHL20(2)                           <---------AHL20(1)       --------->YAB1  --------->AHL20(2)                       --------->AHL20(2) ------MYB52(1) ----------->GT1  <---------MYB52(1)--------->YAB1 --------->AHL20(2)  ----------->GT1   tttgtttaatattaatataggtaaatttaaaattcgttacttaaattggctaaacatactcttcaaaataatatatatccacttaacatagttaaaactc  2712600                                 <---------ARR14(2)                                           <------                                 --------->ARR14(2)                                     <---------ARR14(2)                              --------->YAB1                                            --------->ARR14(2)                            ------>MYB46(1)                                            <---------CCA1(2)                 --------->At5g28300    --------->AHL20(2)             ------>ZmHOX2a(1)--------->ARR11(3)                ----------->GT1 --------->GLK1(1)  ---------->DOF2  <-----------GT1<----------DOF2         ---------->DOF2    ------>MYB83<---------AHL20(2)<---------YAB1       ---------->ID1 -------   tgtattcagataaaagcatggtaaaaaaccaaacatatccatttaaatgtattcaaagtcatgagaaaatttcctatacttgttcctttatatctgcgag  2712700                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                      <---------ARR11(3)                                                                      --------->ARR11(3)                                                                      <---------AGP1        <---------DAG2                ------>MYB83                    --------->AGP1        --------->TOE1(3)       ----------->HVH21                    <---------CCA1(2)        --------->TOE2(3)     --------->At4g35610 <---------ICU4    ----------->ARR10      ------->TEIL            <---------At4g35610 --------->YAB1  <---------MYB52(1)                - ---HSFB2a(2)     <---------AHL20(2)  ------>MYB46(1)            <-----------HVH21   --------->ARR14(2) -->HSFB2a(2)    --------->AHL20(2)--------->DEAR3(2)       --------->MYB46(3)       <---------ARR14(2)   aagtcatgaaccttatccatttattagttttcttctgaccgactaaacctgataatcactaatccaccgttagatcttaaaattccaaatccaaaatgga  2712800              <----------ID1            --------->MYB52(1)         --------->ANAC55(2)         <---------ANAC55(2)      <------ZmHOX2a(2)               <---------HSFB2a(2)         <-----------GT1<----------DOF2      ===================================HOX2a_HOX2a             ---------->ID1  <---------DAG2   ---     <---------ARR11(3)               --------->HSFB2a(2)    <----------DOF2  <-----------GT1     <--     --------->ARR11(3)         <---------ANAC58          ------>NtERF2   <----------DOF2        <---   --------->ICU4 ---------->DOF2 ------>ZmHOX2a(1) --------->TOE2(3)    --------->TOE2(3)     ------ -------->WRKY18(1)             <---------ANAC58    --------->TOE1(3)<----------DOF2           *TSS   cggtcaagatcacttaacgaaaaagaaaacagtttcctgtccagaaatgtctaaccttgaggcctttttctctttcctttaaacttttttttttcgatta  2712900                                                                            <-----------HVH21                                                    ------>NtERF2          --------->O2                                                   <---------ETT(2)        --------->ANAC58                                                  <------NtERF2            ==========================                                         --------->HSFB2a(1)               ==========================                                         <---------HSFB2a(1)               <---------O2                                         --------->HSFC1(2)                <---------TGA1a                                         <---------HSFC1(2)     <---------ANAC46                             ---------->DOF2     ------>NtERF2 --------->At4g35610                 <-       <---------ANAC46  --------->LBD16<---------ARR14(2)     <---------At4g35610        --------->ARR11(3) ------>AHL20(2)         ------>ZmHOX2a(1)       <---------ATERF1(1)       --------->ANAC46  <------- -------AHL20(2)     <-----------GT1    --------->ARR14(2) <---------ICU4  --------->bZIP60(2)   ---- ------YAB1        <---------ICU4       <-----------ARR10  --------->ATHB12--------->ANAC58  <------- --->YAB1    <---------At4g35610 ---------->DOF2<---------DEAR3(1)         --------->TGA1a<---------ARR11(3)   taaattttctcgtgaagctaatttttcctgagaaagaaagcgaaacttcgctggcgactaaagattgctgagaagacacgtcgtctctgtgagaactttt  2713000                           --------->ARR14(2)                           --------->ARR11(3)                     <---------ETT(2)                     --------->ETT(2)                  --------->HSFB2a(2)                  <---------HSFB2a(2)                 <---------LBD16             <---------KAN4(1)             --------->KAN4(1)                                <---------ANAC55(2) ===bZIP_DOF <----------TaMYB80                              <---------LBD16 ===bZIP_DOF<---------KAN4(2)              <---------YAB1  ----------->HVH21 ---------DOF2--------->KAN4(2)            --------------->AGL15    --------->ICU4 --DAG2 --------->HSFB2a(2)<---------ARR11(3)          --------->YAB1--------->ATHB12             <-- ------>ID1 ---------->TaMYB80           <---------At4g35610--------->MYB52(1)                    <-- ---DOF2<---------HSFB2a(2)<---------ARR14(2)          --------->AHL20(2)                      <-----   tctttttcttctggtatattctggagacagatattgttttttcttctgattagagaataatatgacggaagtgattagcaaaacgagtttgttcttagga  2713100                                                             <<<<<<<<<<MYB80                                                            <------MYB83                                                           --------->MYB59         --------->YAB1   <---------GLK1(1)            <------MYB46(1)         <---------ICU4 <---------ICU4                 <------MYB83        <---------ATHB12--------->ATHB12             <---------ANAC46        --------->ICU4 <---------YAB1     <---------MYB52(1)<------MYB46(1) -------ANAC58    --------->REM1(2)      --------->LBD16   <---------AtMYB61 -------ANAC58   --------->ALFIN1      <---------LBD16<---------MYB46(3) -ZmHOX2a(1) <---------At5g28300<----------DOF2   <---------AtMYB61 ---------->DOF2   gcttgtggtaatcatcaccgtgttgatgatttctctttctctccggtgagttttggtgggtttggtttgaaaaagagtttctcttgtctgaagcttaaga  2713200                                                 --------->GLK1(2)                                                <---------GLK1(2)                                     ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                    <---------ZAT2                                   --------->ARR14(2)                                    --------->ZAT2                                   <---------ARR14(2)                                --------->YAB1                                   --------->ARR11(3)                           <---------At4g35610                                   <---------ARR11(3)                     <------ZmHOX2a(2)                          --------->LBD16       --------->ARR14(2)       --------->ARR11(3)     <----                         --------->ANAC46       <---------ARR14(2)       <---------ARR11(3) <--------    --------->HSFC1(2)   <---------ANAC55(2)   --------->HSFB2a(1)   <---------At4g35610 <---------At4g35610    <---------HSFC1(2)   --------->ANAC55(2)   --------->GLK1(1)   <-----------RAV1(2)   --------->At4g35610 <---------At4g35610    <---------LBD16       ----------->ARR10--------->At4g35610 <-----------HVH21 --------->At4g35610   <-----------GT1    <---------LBD16     <---------ARR11(3)--------->At4g35610   gtcagaagcctcttagaagtgtattttacggaaaacagatcgttttcggagattctcaagacgagagcttcagaagatcatcagctatcacagctcaggt  2713300                                                                              --------->TOE1(2)                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           <---------ARR14(3)                                                                           --------->ARR14(3)                                                                           <---------ARR14(2)                                                                           --------->ARR11(3)                                                                    --------->YAB1                                                               =======================HOX2a_HOX2a                                                               ------>ZmHOX2a(2)                                                      --------->TOE1(2)    <---------ARR11(3)                                                     <---------ANAC58      --------->ARR14(2)                                                     <---------ANAC58    ----------->ARR10                                           <---------YAB1     <------ZmHOX2a(2)                                          <---------AHL20(2)  --------->CCA1(2)                                          --------->AHL20(2)  ========================HOX2a_HOX2a     <---------TOE2(3)                   --------->YAB1      <---------ARR11(3)     <---------At4g35610 <----------DOF2                        <---------YAB1--------->TOE2(2)---------->DOF2 ----P                                 --------->AHL20(1)    --------->ARR11(3)------>ZmHOX2a(1) ---RAV1(2)<---------ANAC46            --------->AHL20(2)    --------->AGP1<---------GLK1(2)   agactttaatgttttgtgttttcgtttttgtttatctgaaatattataatccattacatgcgagatctaattagaaagatcctgagagctaattgttgaa  2713400  Previous    Next  AGI:  At1g08570.1    Description:  thioredoxin family protein. Identical to Thioredoxin-like 1 [Arabidopsis Thaliana] (GB:O64654); similar to thioredoxin family protein [Arabidopsis thaliana] (TAIR:AT2G33270.1); similar to unknown [Populus trichocarpa] (GB:ABK96076.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 2712895    to: 2714737    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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