Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ------>ZmHOX2a(2)                                    <------ZmHOX2a(2)                                   --------->ARR11(3)                                   <---------ARR11(3)                                   <---------ARR14(3)                                   --------->ARR14(2)              <---------ANAC46                                   --------->ARR14(3)              <---------ANAC58                --------->ANAC46   --------->AGP1                  <---------ANAC58         ------>ZmHOX2a(1)         <---------ARR14(2)            ------>NtERF2         ===================================HOX2a_HOX2a     <---------GLK1(2)         ==================================HOX2a_HOX2a--------->ZAT14          <----------DOF2        --------->TOE2(3)         <---------GLK1(1)   <---------ZAT14   <---------ZAT18           <--   atttcgccttcctcaaaccagacacaatctcgttagagatcttgttacgaagagacttcacagactctgccttgtgaacacctttactctcttcatggta  2710500         --------->ANAC46                                                      --------->GLK1(2)      ------>ZmHOX2a(2)                                                       <---------ARR14(2)     <------ZmHOX2a(2)                                                        --------->ARR14(2)    --------->ARR14(2)                                                  ----------->HVH21          <-    <---------ARR14(2)    <---------ATHB12<----------DOF2          ---------->DOF2               <--- -------ZAT6  <------NtERF2        <---------CCA1(2)   <---------At4g35610    <---------GLK1(2)  ----   ctgttcgatccgagccagcgtctcactaatcaaacccatctctgctttcacatactctgcttcttctaagaaagatgacagattctcatccatcttgtct  2710600             --------->At4g35610        --------->ANAC58           ------>ZmHOX2a(1)        --------->ANAC58      <---------At4g35610          <---------DAG2--------->ANAC46        --------->ANAC46     --------->MYB59    ------>ZmHOX2a(1)        --------->ANAC58      ---------->DOF2     <-----------HVH21    --------->TOE2(3)         --------->ANAC58  <---------ANAC58     ---------->DOF2      <---------ARR11(3)         <---------DOF5.7(2)  <---------ANAC46   =====================HOX2a_HOX2a      <----------DOF2  <---------ANAC58   <------ZmHOX2a(2)      <---------ARR14(2)        <---------WRKY45 ---------DOF2       ==================================HOX2a_HOX2a    <---------WRKY38(1) ------At4g35610    --------->ARR11(3)      --------->ARR14(2)        <---------WRKY12 ----->At4g35610    <---------ARR11(3)     <---------CCA1(2)   <-----------GT1               <-------   gctttcgtagaagccatctcaagatcaaagtcaggtcctgcttccatatccttcatcgctgcttttttcaagtcaacgtaactcataaacgatttcgtca  2710700                      ---------->DOF2                    ----------->HVH21                        --------->ATHB12                  ----------->RAV1(2)                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                  <---------At4g35610                --------->GLK1(2)                  --------->At4g35610      --------->GLK1(2)--------->ICU4                <-----------GT1           --------->YAB1   --------->At5g28300                 ------ ----TGA1  <----------DOF2          <-----------GT1 <---------GLK1(2)                      ----------   tcaagtcgttcatctttttcacctgaaagtcaacaattttacaagaatcagagagaatcgcagtgattgtaacagaatcaaacaagagaaaatcaaagaa  2710800                                        ---------->DOF2                                   --------->CCA1(2)                                   <------ZmHOX2a(2)                                  --------->ARR14(2)                                  --------->AGP1                              ---------->DOF2                                  <---------ARR14(2)                     <---------ZAT14                                  <---------ARR11(3)              <---------ZAT14                ----                               --------->HSFC1(1)                 --------->ZAT14               <---- --->AHL20(2) <---------YAB1   --------->HSFB2a(2)      --------->DAG2<---------ZAT6        <-------- >DOF2      <---------At4g35610<---------HSFB2a(2)     ---------->DOF2<---------ANAC46<---------YAB1   aatacaacatactcttctgattagtgtgttcttctagatccacaaagtttctgcccagaaagtgagagagtagtgtgaagtaaagcttactatagaattt  2710900                                                <----------ID1                                  <---------------AGL15                              --------->MYB46(3)                                  --------------->AGL15                            --------->MYB52(1)                              <----------DOF2   ----------->GT1        --------->GLK1(1) <----------DOF2                          <----------DOF2     --------->DAG2      --------------------->WRI1 ----->ATHB12  *TSS  ---------->DOF2         ---------->DOF2  <---------MYB52(1)   <---------ALFIN1 -----YAB1   --------->At4g35610 <-----------------AGL2      <---------RAP2.6(3)  <---------ALFIN1 -GLK1(2)    <---------At4g35610 ----------------->AGL3  ------------>MYB.PH3(1)  ----------->HVH21   gattagcgatttgtgagatgagagaaagctttctttctaatataagaaaaaggagaaattagccgttactgtgatttcttcgccccaacggctatatttt  2711000                                                                                           --------->AHL20(2)              <---------ANAC58                                                          --------->YAB1              <---------ANAC58                                                        --------->AHL20(2)          <---------MYB52(1)                                 <-------TEIL          <----------DOF2<--     <---------ARR14(2)                                  <---------AHL20(2)        --------->TOE2(3)     --------->ARR14(2)                                 <---------AHL20(2)         --------->TOE1(3)     ------->TEIL                                       --------->AHL20(2)<----------DOF2--------->AHL20(2)   ggcgatgtatccgttgtcgtccatttgtctatctgtttctgtttcttcaaatctatttttaaattcatgtgaatttctttcgaaactttaaaataatata  2711100                                            <---------WOX13(1)                                          --------->ATHB12                                         <---------YAB1                                     --------->ALFIN1                                   <---------ANAC46                                   ==============================bZIP_DOF                                   <---------TGA1a                                   <---------ANAC58                                   ==============================bZIP_DOF                                   <---------ANAC58                                   --------->O2                                   --------->TGA1a            --------->CCA1(2)                                   <---------O2               --------->GLK1(1)                                  <------NtERF2              <---------ARR11(3)                                 ------>NtERF2               --------->ARR11(3)                                 <---------RAP2.6(3)      <---------TOE2(3)         <---------YAB1         --------->DEAR3(1)       ---------->DOF2                          <--       --------->YAB1          --------->DEAR3(2)     <----------DOF2                           -----       ----------->GT1        <---------ZAT18       --------->At4g35610                <----------ID1 --------ID1        ------->TEIL----------->HVH21   <---------At4g35610     ----------->GT1     -----   gggactaaattgtaattagatgtatgttttagtgccgacgtgtgtgattgagacagctttaaagatatcgaaactgagaagaaaatatagggactaaatt  2711200                                    --------->ATHB12                                    <---------ICU4             <---------bZIP60(1)   <---------YAB1       --------->ANAC58                  <----------    <---------ANAC46     --------->ETT(2) ----------->TGA1                       <---------ALFIN1  <---------ICU4         <---------ETT(2) ----------->HVH21---------->DOF2   <---------At4g35610 --------->ICU4    <----------DOF2 --------->ICU4       --------->ANAC58     --------->At4g35610 -------YAB1 --------->bZIP60(1) --------->YAB1       ---------->DOF2        <---------ZAT2 ------>GT1  <---------bZIP60(2) <---------ICU4     --------->ANAC46         --------->ZAT2 ---->YAB1----------->HVH21     <---------ATHB12  <-----------GT1    --------->ALFIN1    ---------->ID1   gtaattatgtgtatgacatcgcttttgtcgacaaatcatcattggtgacgatttacgaaagcaaagaagaggtgttcttagctgcacatttgtcaccatt  2711300                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                                                              --------->MYB52(2)               <---------ANAC58                                         <---------ALFIN1      -------               <---------ANAC58                                    <---------YAB1       --------->AtLEC2             <---------ARR14(2)  <-----------RAV1(1)             <-----------GT1   <-----------GT1 -GT1      <---------MYB46(3)   <---------TOE2(3)          <----------DOF2 --------->TOE2(3)  -------   tatacaaaaattgtggttcttgtgttttgttttttatgttggaaaacttatggtatagtttcttttgttacgatacaccttagttgaaccattcaaatta  2711400  Previous    Next  AGI:  At1g08560.1    Description:  SYP111 (syntaxin 111); SNAP receptor. Identical to Syntaxin-related protein KNOLLE (KN) [Arabidopsis Thaliana] (GB:Q42374;GB:Q8VXY8;GB:Q9FRS8); similar to SYP124 (syntaxin 124), SNAP receptor [Arabidopsis thaliana] (TAIR:AT1G61290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43962.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 2709635    to: 2710915    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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