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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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               <-----------GT1                               --------->ANAC46
              <---------ICU4                                 --------->ANAC58
              --------->YAB1                               --------->AtMYB61
           --------->WOX13(1)                              <---------ALFIN1
        --------->GLK1(2)                            --------->YAB1
 --------->bZIP60(2)                       ------>ZmHOX2a(1) --------->ANAC58
 --------->ANAC46    ------>ZmHOX2a(1)  ------>ZmHOX2a(1) --------->ANAC46            --------->ATHB12
---------ALFIN1--------->ARR11(3) <---------At4g35610<---------ICU4        <-----------GT1       <--
 
ttccacatcagaatcaattatctcctcatcaaacttcatcttcctcctcttcttcatcatcaccacaccatcttctattatctctctcttgatgggtttc  2612800
                                         <---------DEAR3(1)
                                        <---------LBD16             <---------ANAC46
                                       <---------ALFIN1       <---------ARR14(2)      <---------YAB1
          ----------->GT1            -------->P               --------->ARR14(2)      ------>ZmHOX2a(1)
        ---------->DOF2           <---------ZAT2         --------->ARR14(2)        <---------YAB1
      ==============================HOX2a_HOX2a          <---------ARR14(2)   --------->bZIP60(2)
      ------>ZmHOX2a(2)           <---------At4g35610   --------->GLK1(1)     --------->ANAC46
  <---------YAB1                  --------->At4g35610   <---------GLK1(1)   ------->GAMYB
<---------At4g35610               --------->ZAT2      <------ZmHOX2a(1)    --------->MYB46(3)    <--
-------At4g35610             ------>ZmHOX2a(1)      <---------TOE2(3) ----------->GT1--------->TOE2(3)
 
ttctgatgatcgaaagttatatcagagccatcctccgagctaccacggtggtatttaggaaatccgatttggagggtaaccacatcatccttattctctt  2612900
                                                                                     <---------MYB46(3)
                                                                                     --------->MYB46(2)
                                                                                     <--------------
                                                                                     --------->MYB111(2)
                                                                                     --------->MYB59
                                                                                    <--------P
                                                                                    <---------MYB55(1)
                                                                             <---------ANAC58
                                                                         <---------MYB46(3)
                                                                      <---------ANAC46
                                                                      <---------ANAC58<------MYB46(1)
                                                                      <---------ANAC58<------MYB83
           <---------ANAC58                                      --------->ALFIN1   <---------ANAC46
           <---------ANAC58                                    --------->O2  <---------ANAC58
       --------->LBD16                                         <---------ANAC58   <---------MYB46(3)
   <---------ARR14(2)                                          <---------ANAC58  <---------AtMYB61
   --------->ARR14(2)                                          --------->ANAC55(2)--------->MYB55(2)
  --------->GLK1(1)  <---------AHL20(2)                        <---------O2<---------ARR14(2)
  <---------GLK1(1)<---------YAB1                 --------->ANAC58   --------->ATHB12--------->MYB111(1)
--------DOF2  <---------WRKY18(1)                 --------->ANAC58--------->REM1(2)<-------GAMYB
 
ctttgatatccgaggcttgactattattttccatgagcttgtttagaagaggcaagcattgaatagacgtgttgagtggttcttgtggttggtacaagaa  2613000
                               <---------MYB46(3)
                   ----------->RAV1(2)
   <---------HSFB2a(1)        --------->ALFIN1
   ------>ZmHOX2a(2) ----------->HVH21
   --------->HSFB2a(1)     <-----------RAV1(1)                       --------->ANAC58
  <------ZmHOX2a(2)====================RAV------>ZmHOX2a(2)          --------->ANAC58
 <---------ARR11(3)<---------At4g35610  --------->ARR11(3)           --------->ANAC46
 --------->ARR11(3)--------->At4g35610  <---------ARR11(3)          <---------TOE1(2)
-AtSPL8         <-------TEIL  <---------AtMYB61       <---------CCA1(2)
 
tagagatcgttccaacatgttcatctgactctggtggtgatttgatcttgatatagcatctcttgtcttcccacgatataacacagatttagaagaagta  2613100
                             <---------ANAC58
                             <---------ANAC58
                    <---------ATHB12
              --------->ANAC46
              --------->ANAC58      <---------ARR14(2)                          <----------DOF2
              --------->ANAC58      --------->ARR14(2)      --------->YAB1      <---------DAG2
       <---------TOE1(3) ---------->DOF2               <---------ANAC58 <---------At4g35610  <------
       <---------TOE2(3)<---------ATHB12               <---------ANAC58 <---------CCA1(2)------>ZmHOX2a(1)
 
gtagaagattgaggtttaagccattcaataaagcttggggattcgaaacttaagcctttcgtctcataagaattcatctctcgctttctctcctctcttt  2613200
                                                                                    ----------->RAV1(2)
                                                                                   -------->P
                                                                                   ------>MYB46(1)
                                                                                   --------->MYB52(1)
                                                                                   ------>MYB83
                                                                                 <---------MYB59
                                                                                 <---------MYB111(1)
                                       ----------->GT1                --------->AHL20(2) <---------ANAC58
                                      *TSS                         <---------AHL20(1)    <---------ANAC58
                               --------->ANAC46                    --------->AHL20(1)---------------
                               --------->ANAC58                 --------->AHL20(2)--------->MYB55(1)
                               --------->ANAC58                 <-----------TBP  <---------MYB46(2)
                             --------->ANAC46               ----------->GT1      --------->AtMYB61
                           <---------ALFIN1            <---------YAB1 <---------AHL20(2) <---------ANAC46
----DOF2                --------->AtMYB61   --------->ZAT6---------->DOF2      ------->TEIL  <------
 
cactctccctctctctctctctctctacctccacacgaagaagggtaagactagtagtatgaaaagtttatatattaatatcaacctacctggtgtgtat  2613300
                                                           <---------TOE1(3)         --------->ANAC46
                                                           <---------TOE2(3)       <---------ALFIN1
                                                          ---------->DOF2         ==================
                                              --------->ARR14(2)                  ------>MYB83
                                              <---------ARR14(3)                  -------->P
     --------->SPL7                           <-----------ARR10                   ------>MYB46(1)
    <---------MYB52(1)                        --------->ARR11(3)                 ------>ZmHOX2a(1)
   <---------SPL7                             <---------ARR11(3)                <---------MYB111(2)
 --------------->AtSPL3                       --------->ARR14(3)                <---------MYB111(1)
------>WRI1              <----------DOF2      --------->GLK1(2)               ------>ZmHOX2a(1)
---CCA1(2)       <---------GLK1(2)  ------------>CBF   <----------DOF2  <----------DOF2--------->LBD16
 
cgtagccgttcgtcaaaataggttctctctttatttttctccaatacaaaatcttcttctttaaagttttgttttcttttcctcctaccccccaaaacgt  2613400
                ------->MYC4
                ------->PIF5
                <-------PIF5
                <-------MYC4
                <-------MYC3
                <-------PIF4
               <---------TGA1a
               --------->O2
               --------->ANAC55(2)
               <---------ANAC55(2)
               <---------O2
               --------->TGA1a
               ==========================================bZIP_DOF
              <---------TOE1(2)
              ------------>OsbHLH66
             <---------ALFIN1
             <------------OsbHLH66                                                     <------------
            <---------SPL7                                                     <------MYB83
         <-----------HVH21<---------REM1(2)                                    <------MYB46(1)
        <-----------RAV1(1)                                                   <---------MYB46(3)
     <---------ARR14(2) <---------ETT(2)          ----------->GT1             --------->MYB55(2)
 --------->ZAT18------->MYC2                  ---------->DOF2                --------->ALFIN1
 --------->ZAT14------->PIF4                <------ZmHOX2a(1)                <---------ANAC46      -
 <---------ZAT18<-------MYC2               <----------ID1                  <---------ANAC46     <---
 <---------ZAT14------->MYC3        ================================================================
=========================MYC_MYB    <---------------AGL15  <-----------GT1--------->ALFIN1    ------
 
atagtgcagaaatgtcgcacgtgtctgtctacgcgtttacatcaagaggaaaagagtgaaattttcttcacaaaaatgtggtgggtcttacttcacatag  2613500
                                                                                                   <
       --------->ANAC58                    ------>ZmHOX2a(1)                                       -
       --------->ANAC58                   --------->TOE2(2)                                       --
    <---------ARR14(2)                    --------->TOE1(2)                                      <--
    --------->ARR14(2)                    --------->TOE2(3)                                    -----
---AGL15                        ---------->DOF2   --------->YAB1                               <----
--------->DOF2         <----------DOF2 --------->GLK1(2)                                       <----
------ZAT6         --------->ANAC58    <---------ARR14(2)                 <-----------GT1     <-----
===MADS_MADS       --------->ANAC58    --------->ARR14(2)<----------DOF2<----------DOF2       ------
----->GT1  ---------->DOF2    <---------ATHB12 --------->YAB1     <-----------GT1      <----------DOF2
 
tgaaaaggaaacgcacaagcgcaaggcttttcaatgaaagagaatcctaagaatcatagtctttttttttttcttctttaccctcatttcctttcccatt  2613600
      ----------->GT1      --------->ARR14(2)
---------AHL20(2)          <---------ARR14(2)
-------->AHL20(2)      ------>MYB83              --------->YAB1     <---------AHL20(2)
------->YAB1           ------>MYB46(1)          <---------YAB1 <---------YAB1
-------YAB1           ----------->RAV1(1)--------->YAB1     <---------WOX13(1)
---->ATHB51         --------->MYB46(3)------>ZmHOX2a(1)   --------->ATHB12
-----ICU4          >>>>>>>>>>MYB80<---------ARR11(3)     --------->ICU4
----HAHB4   <---------ARR11(3)   <---------GLK1(1)       <---------YAB1
----YAB1    --------->ARR11(3)   --------->GLK1(1)     --------->YAB1                              -
--->ICU4 <-----------GT1--------->MYB46(3)  --------->YAB1<---------ICU4 <-------TEIL             <-
 
attaaaattttgtaacatcttaaaccaacaaatacgatatcctttcatcatattatagtcatgattgtcatttaagtgcatatagaccggcgaagacaaa  2613700
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AGI:  At1g08290.1   
Description:  zinc finger (C2H2 type) protein (WIP3). similar to NTT (NO TRANSMITTING TRACT), nucleic acid binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G57670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64917.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087)
Range:  from: 2609993    to: 2613239    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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