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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                 <--
                                                   <---------ABI4(2)                       <--------
                                                   --------->MYB46(3)                      <--------
                                                  --------->ANAC58                         <--------
                                       --------->At4g35610                               <------ZmHOX2a(2)
                                       <---------At4g35610                              <---------ARR14(2)
                                    --------->At4g35610                                 --------->ARR14(2)
                                   <---------MYB46(3)                                   --------->AGP1
                   <------ZmHOX2a(1)<---------At4g35610      <---------ALFIN1         ----------->ARR10
       <---------ANAC58            <---------RAP2.3(1)  --------->LBD16          ----------->ARR10
       <---------ANAC58   <----------DOF2         --------->ANAC58            <---------ANAC46<-----
-------->ANAC58   <---------YAB1 --------->At4g35610   <---------LBD16       ------>NtERF2<-------TEIL
-------->ANAC58  <---------TOE2(3) <---------ATERF1(1)<---------LBD16       <---------ANAC46--------
->ZmHOX2a(2)    --------->YAB1   <---------At4g35610 --------->MYB52(1)  ----------->HVH21------>ZmHOX2a(2)
 
gcaaggtatagcttgacaattaggataagctttaccagcggctgcttcagagtaagcaccgggaacaccttgataagcgacgcgtagattagatccgtgc  2589900
               <-------TEIL
              <------ZmHOX2a(2)
             --------->ARR11(3)
             <---------ARR11(3)
             --------->ARR14(2)
             <---------ARR14(2)
     <---------ATERF1(1)
     <---------DEAR4(2)
     ------>NtERF2<---------MYB52(1)
     --------->LBD16
    <---------DEAR3(1)
    <---------ATERF1(2)
    --------->DEAR3(1)
    --------->ATERF1(2)
   --------->DEAR3(2)
   --------->ATERF1(1)
   --------->RAP2.3(1)
   <------NtERF2 <-----------TGA1
  --------->ZAT2 <-----------HVH21
  <---------ZAT2<---------ANAC55(2)                                 <---------WOX13(1)
  <---------ATERF1(1)                                          ------>MYB83
  ------>NtERF2------>ZmHOX2a(2)                               ------>MYB46(1)
 <---------ARR14(2)                                           --------->MYB52(1)
 --------->ARR14(2)  <---------YAB1                          --------->AtMYB61
-------At4g35610--------->ANAC55(2)                         <---------MYB55(2)
-ANAC46      --------->AGP1                            --------->ALFIN1
-ANAC58     --------->GLK1(1)                        <---------ANAC46      --------->YAB1 XXXXXXXXXX
-ANAC58     <---------GLK1(1)               ----------->TGA1--------->DEAR3(2)          --------->YAB1
--TEIL<------NtERF2  --------->AtLEC2       <---------YAB1  --------->MYB46(3) <---------GLK1(1)
->LBD16    ----------->ARR10              <---------ICU4    <---------MYB52(2) --------->GLK1(1)   <
 
atcggagccggcgagagatccgtcatgctaaggggtttcagtggattatgacgatgctgtggaaccaacggattgctatcagatttctcaatcggaacaa  2590000
                            <---------MYB52(1)
                        ------>NtERF2
                      --------->RAP2.3(1)
                      <------NtERF2
                      --------->ATERF1(1)
                     <---------RRTF1(1)
                     <---------ATERF1(1)
                     <---------RAP2.6(1)
                     <---------DEAR4(2)
                     ------>NtERF2
                     <---------ERF1
                     <---------ORA47(2)
                    --------->ATERF1(2)
                    <---------RAP2.3(2)
                    --------->DEAR3(1)
                    <---------RAP2.3(3)
                    <---------DEAR3(1)
                    <---------RRTF1(3)
                    <---------RRTF1(2)
                   --------->ATERF1(1)
                   ------>NtERF2
                   <------NtERF2                           --------->ARR14(2)
                   <---------ABI4(1)                       <---------ARR14(2)
                  <---------ORA47(2)                      <------NtERF2
                  <---------RAP2.3(1)                    --------->LBD16
                  <---------ATERF1(1)                   --------->RAP2.6(2)
                 <---------DEAR3(1)                     --------->LBD16                --------->GLK1(2)
                 <---------RAP2.3(2) <---------MYB52(1) --------->RAP2.3(2)           <---------GLK1(2)
      --------->LBD16<---------RAP2.3(1)               <---------LBD16          --------->ARR14(2)
      ------>ZmHOX2a(1)<---------DEAR3(1)             --------->LBD16           <---------ARR14(2)
      --------->HSFB2a(2) <----------DOF2             ------>NtERF2            <------ZmHOX2a(1)
      <---------HSFB2a(2)<------NtERF2               --------->ANAC46         --------->ICU4
     <---------LBD16<---------ATERF1(2)  <---------At4g35610               <--------P --------->ARR14(2)
XXXXXXXXXX>MIR166A-G--------->ALFIN1<-------GAMYB   <---------LBD16 <------NtERF2     <---------ARR14(2)
-------TEIL     --------->SPL7     <---------MYB46(3)--------->DEAR3(1)<-----------RAV1(2)<---------YAB1
 
gattcattcctggaactcgtgcggcggcgctgttatggccgttgagatgatcaactccgccggaaactggaggcacaggtaaggattcagattcttcttg  2590100
                                                                                       <---------ANAC58
                                                                                       <---------ANAC58
                                                                                  --------->ZAT2
                                                                                  <---------At4g35610
                                                                                  --------->ATERF1(1)
                                                                                  <---------ZAT2
                                                                                  --------->At4g35610
                                                                                  <------NtERF2
                                                                                <---------ATERF1(2)
                                                                                --------->DEAR3(1)
                                                                                <---------DEAR3(1)
                                                                                --------->ATERF1(2)
                                                                               --------->DEAR4(2)
                                                                               <---------LBD16
                                                                               <------NtERF2
                                                                               --------->RAP2.3(1)
                                                                               --------->ATERF1(1)
                                                                              <---------ATERF1(1)
                                                                              ------>NtERF2
                                                                              <---------RAP2.3(1)
                                                                             --------->DEAR3(1)
                                                                             <---------DEAR3(1)
                                                                            <------NtERF2
                                                                           <-----------HVH21
                                                                           ------>NtERF2
                                                                           <---------ATERF1(1)  ----
                                                                     <---------ATERF1(1)        ----
                                                                    --------->DEAR3(1)<---------STY1(2)
                                                                  --------->ZAT18<---------ATERF1(1)
                                                                  --------->ZAT14------>NtERF2<-----
                                                             ---------->DOF2--------->ATERF1(1)<----
                                        --------->YAB1   --------->LBD16  <---------DEAR3(1)  ======
                                      --------->AtLEC2 <---------LBD16    --------->DEAR3(1)  <-----
                                  ------>NtERF2        --------->TOE1(2) --------->ATERF1(1)  <-----
                             <---------GLK1(1)        ------>ZmHOX2a(2)  --------->RAP2.3(1)  <-----
                             --------->GLK1(1)       <------ZmHOX2a(2)   <------NtERF2--------->STY1(2)
                             --------->At4g35610    <---------ARR14(2)  <---------RAP2.3(1)  -------
         <---------ANAC58  <------ZmHOX2a(1)        --------->ARR14(2)--------->ATERF1(1)--------->ANAC58
         <---------ANAC58  ==================================HOX2a_HOX2a<---------ATERF1(1)  -------
         <---------ANAC46  =================================HOX2a_HOX2a<---------DEAR3(1)--------->ANAC58
  <-----------GT1       <-----------RAV1(2)  --------->MYB46(3)   <---------ZAT18<---------DEAR3(2)
 
agaaataaccttgcttgttagaatagcgcaggagctctgccattcagaacgaccagatcgcgcgataagcgcagtcgccgtcgccggctggctagcacct  2590200
-->MYB83
-->MYB46(1)
----MYB59
-----------AGL15                           <------NtERF2
==========================================MADS_MADS  ----------->GT1
------------AGL3                         <---------ANAC58
----MYB46(2)                             <---------ANAC58
----MYB111(1)             --------------->AGL15 <---------YAB1                ---------->DOF2
-->ANAC58             <----------DOF2    <---------RAP2.6(2)          --------->AHL20(2)         *TSS
-->ANAC58    <---------YAB1              <---------ANAC46            <---------ATHB12       --------
 
aatattggagaagaagatgatagagctttcatgttttagcaatggcgtcttaaaattggttattcaagctcaatgaaatagcaaagtcgagaatgtagaa  2590300
                                                    ------->GAMYB
                                                    <---------ALFIN1
                                                   --------->MYB46(3)
                                                   <---------MYB55(2)
                                                --------->MYB46(3)
                                            -------->P
                                            ------>MYB83
                                            ------>MYB46(1)
                     <---------MYB52(1)    --------->MYB55(1)
                    ----------------------->TaNAC69(2)
               --------->MYB111(1)        <---------MYB55(2)
               <---------MYB46(3)         <---------MYB111(1)
              <--------P <---------ANAC58 --------->MYB46(3)
            <---------ANAC46              <---------MYB111(2)--------->ANAC46         <---------MYB52(1)
         ------>ZmHOX2a(1)             <---------ALFIN1<---------DAG2              --------->RAP2.6(3)
         --------->LBD16 <---------ANAC58 <---------MYB46(2) --------->ANAC58     --------->MYB52(1)
        <---------LBD16  <---------ANAC46 --------->AtMYB61  --------->ANAC58  --------->AtMYB61
--->GT1----------->RAV1(2)   <-----------HVH21--------->AtMYB61        <---------SPL7--------->LBD16
 
aaacatgttttcctggggtagttcgtttgtgtggtcacttctccacctaccacaaccaccttacaagtcacagtcgtatggaccataccggcatttaact  2590400
                  --------->LBD16
                ------>ZmHOX2a(2)                                     --------->CCA1(2)
               <------ZmHOX2a(2)                                     <---------ARR11(3)
              --------->ARR14(2)                          --------->ANAC46
              <---------ARR14(2)                         --------->SPL7                         <---
  --------->AHL20(2)            <------MYB83  <---------GLK1(2)      --------->ARR11(3)       ------
  <---------AHL20(2)            <------MYB46(1)         <---------ALFIN1<---------YAB1      <-------
 --------->AHL20(2) <----------DOF2  --------->YAB1<-----------GT1 <---------TOE2(3)    <----------DOF2
 
gaaaattaattcgacccgatccggtttaagttatttggtttcataaaccgattttctccataccccaattgagatatgagagtgtttaagactttaccgg  2590500
                                                <---------ANAC58
                                  <---------ANAC58
                                  <---------ANAC46
                                  <---------ANAC58
                         <---------ALFIN1       <---------ANAC58
                        <---------ZAT14        <---------ZAT2   <---------At4g35610
------DEAR3(1)          <---------REM1(2)    <------NtERF2      --------->At4g35610
--->LBD16             --------->ZAT14      <---------DEAR3(1)------>MYB83
--LBD16     xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->ZAT2------>MYB46(1)
 
aggtgattcgagttcaaggagacagtctacacttgtgacttgtgagtcggagcttgagaacacctacagctacaagaaggaagtttgttttcgcctcgag  2590600
                 <---------ICU4
                <---------YAB1
                --------->ICU4
              --------->YAB1
      ------>ZmHOX2a(1)           --------->DAG2      ---------->DOF2
 --------->GLK1(1)      --------->HSFB2a(2)    <---------GLK1(1)    ---------->DOF2       ----------
 <---------GLK1(1)      <---------HSFB2a(2)    --------->GLK1(1)<----------ID1<----------DOF2  -----
 
ctagaaatcctaatttgtcatcatcgtctcgaatggaaaggctgtgttcgaaatccaaaatgcaaatgcgataaagatgggcttttagataggcccaatt  2590700
                                                         <---------YAB1
                                                         ----------->GT1
                                                   <<<<<<<<<<E2Fa
                                                   <<<<<<<<<<E2Fb
                                                   <<<<<<<<<<E2Ff
                                                   <<<<<<<<<<E2Fe
                                                   <<<<<<<<<<E2Fd
                                                   <<<<<<<<<<E2Fc
                                                  ----------->GT1
                              <-------GAMYB      <---------LBD16
                              <---------ANAC58<<<<<<<<<<<<<<<E2Fa
                              <---------ANAC58<<<<<<<<<<<<<<<E2Ff             ------>ZmHOX2a(1)
                             <------MYB83     <<<<<<<<<<<<<<<E2Fe    <---------AHL20(2)
                             <------MYB46(1)  <<<<<<<<<<<<<<<E2Fc  <---------CCA1(1)
                             <---------MYB46(3) <---------LBD16    <---------RVE1(1)
                        --------->ATHB12      <<<<<<<<<<<<<<<E2Fb <---------GLK1(2)
                   <---------YAB1           --------->DAG2  <---------YAB1 <-----------GT1
               <---------ANAC58            ---------->DOF2--------->YAB1  <-----------GT1        <--
-->CBF         <---------ANAC58   ------------>CBF--------->LBD16 <---------ARR11(3)             <--
---->YAB1 --------->ALFIN1  <---------AtMYB61 <<<<<<<<<<<<<<<E2Fd --------->ARR11(3)   <----------DOF2
 
agagtccaaaaatgaggggcttatcagtgatttggttgccaataccaaaagcgcgggaaaatgataaaagatttttttttcctctctactctttcactca  2590800
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AGI:  At1g08250.1   
Description:  ADT6 (AROGENATE DEHYDRATASE 6); arogenate dehydratase/ prephenate dehydratase. similar to PD1 (PREPHENATE DEHYDRATASE 1), arogenate dehydratase/ prephenate dehydratase [Arabidopsis thaliana] (TAIR:AT2G27820.1); similar to unknown [Populus trichocarpa] (GB:ABK95815.1); contains InterPro domain Prephenate dehydratase; (InterPro:IPR001086)
Range:  from: 2588854    to: 2590298    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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