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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<--
<---------
ABI4(2)
<--------
--------->
MYB46(3)
<--------
--------->
ANAC58
<--------
--------->
At4g35610
<------
ZmHOX2a(2)
<---------
At4g35610
<---------
ARR14(2)
--------->
At4g35610
--------->
ARR14(2)
<---------
MYB46(3)
--------->
AGP1
<------
ZmHOX2a(1)
<---------
At4g35610
<---------
ALFIN1
----------->
ARR10
<---------
ANAC58
<---------
RAP2.3(1)
--------->
LBD16
----------->
ARR10
<---------
ANAC58
<----------
DOF2
--------->
ANAC58
<---------
ANAC46
<-----
-------->
ANAC58
<---------
YAB1
--------->
At4g35610
<---------
LBD16
------>
NtERF2
<-------
TEIL
-------->
ANAC58
<---------
TOE2(3)
<---------
ATERF1(1)
<---------
LBD16
<---------
ANAC46
--------
->
ZmHOX2a(2)
--------->
YAB1
<---------
At4g35610
--------->
MYB52(1)
----------->
HVH21
------>
ZmHOX2a(2)
gcaaggtatagcttgacaattaggataagctttaccagcggctgcttcagagtaagcaccgggaacaccttgataagcgacgcgtagattagatccgtgc
2589900
<-------
TEIL
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ATERF1(1)
<---------
DEAR4(2)
------>
NtERF2
<---------
MYB52(1)
--------->
LBD16
<---------
DEAR3(1)
<---------
ATERF1(2)
--------->
DEAR3(1)
--------->
ATERF1(2)
--------->
DEAR3(2)
--------->
ATERF1(1)
--------->
RAP2.3(1)
<------
NtERF2
<-----------
TGA1
--------->
ZAT2
<-----------
HVH21
<---------
ZAT2
<---------
ANAC55(2)
<---------
WOX13(1)
<---------
ATERF1(1)
------>
MYB83
------>
NtERF2
------>
ZmHOX2a(2)
------>
MYB46(1)
<---------
ARR14(2)
--------->
MYB52(1)
--------->
ARR14(2)
<---------
YAB1
--------->
AtMYB61
-------
At4g35610
--------->
ANAC55(2)
<---------
MYB55(2)
-
ANAC46
--------->
AGP1
--------->
ALFIN1
-
ANAC58
--------->
GLK1(1)
<---------
ANAC46
--------->
YAB1
XXXXXXXXXX
-
ANAC58
<---------
GLK1(1)
----------->
TGA1
--------->
DEAR3(2)
--------->
YAB1
--
TEIL
<------
NtERF2
--------->
AtLEC2
<---------
YAB1
--------->
MYB46(3)
<---------
GLK1(1)
->
LBD16
----------->
ARR10
<---------
ICU4
<---------
MYB52(2)
--------->
GLK1(1)
<
atcggagccggcgagagatccgtcatgctaaggggtttcagtggattatgacgatgctgtggaaccaacggattgctatcagatttctcaatcggaacaa
2590000
<---------
MYB52(1)
------>
NtERF2
--------->
RAP2.3(1)
<------
NtERF2
--------->
ATERF1(1)
<---------
RRTF1(1)
<---------
ATERF1(1)
<---------
RAP2.6(1)
<---------
DEAR4(2)
------>
NtERF2
<---------
ERF1
<---------
ORA47(2)
--------->
ATERF1(2)
<---------
RAP2.3(2)
--------->
DEAR3(1)
<---------
RAP2.3(3)
<---------
DEAR3(1)
<---------
RRTF1(3)
<---------
RRTF1(2)
--------->
ATERF1(1)
------>
NtERF2
<------
NtERF2
--------->
ARR14(2)
<---------
ABI4(1)
<---------
ARR14(2)
<---------
ORA47(2)
<------
NtERF2
<---------
RAP2.3(1)
--------->
LBD16
<---------
ATERF1(1)
--------->
RAP2.6(2)
<---------
DEAR3(1)
--------->
LBD16
--------->
GLK1(2)
<---------
RAP2.3(2)
<---------
MYB52(1)
--------->
RAP2.3(2)
<---------
GLK1(2)
--------->
LBD16
<---------
RAP2.3(1)
<---------
LBD16
--------->
ARR14(2)
------>
ZmHOX2a(1)
<---------
DEAR3(1)
--------->
LBD16
<---------
ARR14(2)
--------->
HSFB2a(2)
<----------
DOF2
------>
NtERF2
<------
ZmHOX2a(1)
<---------
HSFB2a(2)
<------
NtERF2
--------->
ANAC46
--------->
ICU4
<---------
LBD16
<---------
ATERF1(2)
<---------
At4g35610
<--------
P
--------->
ARR14(2)
XXXXXXXXXX>
MIR166A-G
--------->
ALFIN1
<-------
GAMYB
<---------
LBD16
<------
NtERF2
<---------
ARR14(2)
-------
TEIL
--------->
SPL7
<---------
MYB46(3)
--------->
DEAR3(1)
<-----------
RAV1(2)
<---------
YAB1
gattcattcctggaactcgtgcggcggcgctgttatggccgttgagatgatcaactccgccggaaactggaggcacaggtaaggattcagattcttcttg
2590100
<---------
ANAC58
<---------
ANAC58
--------->
ZAT2
<---------
At4g35610
--------->
ATERF1(1)
<---------
ZAT2
--------->
At4g35610
<------
NtERF2
<---------
ATERF1(2)
--------->
DEAR3(1)
<---------
DEAR3(1)
--------->
ATERF1(2)
--------->
DEAR4(2)
<---------
LBD16
<------
NtERF2
--------->
RAP2.3(1)
--------->
ATERF1(1)
<---------
ATERF1(1)
------>
NtERF2
<---------
RAP2.3(1)
--------->
DEAR3(1)
<---------
DEAR3(1)
<------
NtERF2
<-----------
HVH21
------>
NtERF2
<---------
ATERF1(1)
----
<---------
ATERF1(1)
----
--------->
DEAR3(1)
<---------
STY1(2)
--------->
ZAT18
<---------
ATERF1(1)
--------->
ZAT14
------>
NtERF2
<-----
---------->
DOF2
--------->
ATERF1(1)
<----
--------->
YAB1
--------->
LBD16
<---------
DEAR3(1)
======
--------->
AtLEC2
<---------
LBD16
--------->
DEAR3(1)
<-----
------>
NtERF2
--------->
TOE1(2)
--------->
ATERF1(1)
<-----
<---------
GLK1(1)
------>
ZmHOX2a(2)
--------->
RAP2.3(1)
<-----
--------->
GLK1(1)
<------
ZmHOX2a(2)
<------
NtERF2
--------->
STY1(2)
--------->
At4g35610
<---------
ARR14(2)
<---------
RAP2.3(1)
-------
<---------
ANAC58
<------
ZmHOX2a(1)
--------->
ARR14(2)
--------->
ATERF1(1)
--------->
ANAC58
<---------
ANAC58
==================================
HOX2a_HOX2a
<---------
ATERF1(1)
-------
<---------
ANAC46
=================================
HOX2a_HOX2a
<---------
DEAR3(1)
--------->
ANAC58
<-----------
GT1
<-----------
RAV1(2)
--------->
MYB46(3)
<---------
ZAT18
<---------
DEAR3(2)
agaaataaccttgcttgttagaatagcgcaggagctctgccattcagaacgaccagatcgcgcgataagcgcagtcgccgtcgccggctggctagcacct
2590200
-->
MYB83
-->
MYB46(1)
----
MYB59
-----------
AGL15
<------
NtERF2
==========================================
MADS_MADS
----------->
GT1
------------
AGL3
<---------
ANAC58
----
MYB46(2)
<---------
ANAC58
----
MYB111(1)
--------------->
AGL15
<---------
YAB1
---------->
DOF2
-->
ANAC58
<----------
DOF2
<---------
RAP2.6(2)
--------->
AHL20(2)
*
TSS
-->
ANAC58
<---------
YAB1
<---------
ANAC46
<---------
ATHB12
--------
aatattggagaagaagatgatagagctttcat
gttttagcaatggcgtcttaaaattggttattcaagctcaatgaaatagcaaagtcgagaatgtag
aa
2590300
------->
GAMYB
<---------
ALFIN1
--------->
MYB46(3)
<---------
MYB55(2)
--------->
MYB46(3)
-------->
P
------>
MYB83
------>
MYB46(1)
<---------
MYB52(1)
--------->
MYB55(1)
----------------------->
TaNAC69(2)
--------->
MYB111(1)
<---------
MYB55(2)
<---------
MYB46(3)
<---------
MYB111(1)
<--------
P
<---------
ANAC58
--------->
MYB46(3)
<---------
ANAC46
<---------
MYB111(2)
--------->
ANAC46
<---------
MYB52(1)
------>
ZmHOX2a(1)
<---------
ALFIN1
<---------
DAG2
--------->
RAP2.6(3)
--------->
LBD16
<---------
ANAC58
<---------
MYB46(2)
--------->
ANAC58
--------->
MYB52(1)
<---------
LBD16
<---------
ANAC46
--------->
AtMYB61
--------->
ANAC58
--------->
AtMYB61
--->
GT1
----------->
RAV1(2)
<-----------
HVH21
--------->
AtMYB61
<---------
SPL7
--------->
LBD16
aaacatgttttcctggggtagttcgtttgtgtggtcacttctccacctaccacaaccaccttacaagtcacagtcgtatggaccataccggcatttaact
2590400
--------->
LBD16
------>
ZmHOX2a(2)
--------->
CCA1(2)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ANAC46
<---------
ARR14(2)
--------->
SPL7
<---
--------->
AHL20(2)
<------
MYB83
<---------
GLK1(2)
--------->
ARR11(3)
------
<---------
AHL20(2)
<------
MYB46(1)
<---------
ALFIN1
<---------
YAB1
<-------
--------->
AHL20(2)
<----------
DOF2
--------->
YAB1
<-----------
GT1
<---------
TOE2(3)
<----------
DOF2
gaaaattaattcgacccgatccggtttaagttatttggtttcataaaccgattttctccataccccaattgagatatgagagtgtttaagactttaccgg
2590500
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
ALFIN1
<---------
ANAC58
<---------
ZAT14
<---------
ZAT2
<---------
At4g35610
------
DEAR3(1)
<---------
REM1(2)
<------
NtERF2
--------->
At4g35610
--->
LBD16
--------->
ZAT14
<---------
DEAR3(1)
------>
MYB83
--
LBD16
xxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
ZAT2
------>
MYB46(1)
aggtgattcgagttcaaggagacagtctacacttgtgacttgtgagtcggagcttgagaacacctacagctacaagaaggaagtttgttttcgcctcgag
2590600
<---------
ICU4
<---------
YAB1
--------->
ICU4
--------->
YAB1
------>
ZmHOX2a(1)
--------->
DAG2
---------->
DOF2
--------->
GLK1(1)
--------->
HSFB2a(2)
<---------
GLK1(1)
---------->
DOF2
----------
<---------
GLK1(1)
<---------
HSFB2a(2)
--------->
GLK1(1)
<----------
ID1
<----------
DOF2
-----
ctagaaatcctaatttgtcatcatcgtctcgaatggaaaggctgtgttcgaaatccaaaatgcaaatgcgataaagatgggcttttagataggcccaatt
2590700
<---------
YAB1
----------->
GT1
<<<<<<<<<<
E2Fa
<<<<<<<<<<
E2Fb
<<<<<<<<<<
E2Ff
<<<<<<<<<<
E2Fe
<<<<<<<<<<
E2Fd
<<<<<<<<<<
E2Fc
----------->
GT1
<-------
GAMYB
<---------
LBD16
<---------
ANAC58
<<<<<<<<<<<<<<<
E2Fa
<---------
ANAC58
<<<<<<<<<<<<<<<
E2Ff
------>
ZmHOX2a(1)
<------
MYB83
<<<<<<<<<<<<<<<
E2Fe
<---------
AHL20(2)
<------
MYB46(1)
<<<<<<<<<<<<<<<
E2Fc
<---------
CCA1(1)
<---------
MYB46(3)
<---------
LBD16
<---------
RVE1(1)
--------->
ATHB12
<<<<<<<<<<<<<<<
E2Fb
<---------
GLK1(2)
<---------
YAB1
--------->
DAG2
<---------
YAB1
<-----------
GT1
<---------
ANAC58
---------->
DOF2
--------->
YAB1
<-----------
GT1
<--
-->
CBF
<---------
ANAC58
------------>
CBF
--------->
LBD16
<---------
ARR11(3)
<--
---->
YAB1
--------->
ALFIN1
<---------
AtMYB61
<<<<<<<<<<<<<<<
E2Fd
--------->
ARR11(3)
<----------
DOF2
agagtccaaaaatgaggggcttatcagtgatttggttgccaataccaaaagcgcgggaaaatgataaaagatttttttttcctctctactctttcactca
2590800
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AGI:
At1g08250.1
Description:
ADT6 (AROGENATE DEHYDRATASE 6); arogenate dehydratase/ prephenate dehydratase. similar to PD1 (PREPHENATE DEHYDRATASE 1), arogenate dehydratase/ prephenate dehydratase [Arabidopsis thaliana] (TAIR:AT2G27820.1); similar to unknown [Populus trichocarpa] (GB:ABK95815.1); contains InterPro domain Prephenate dehydratase; (InterPro:IPR001086)
Range:
from: 2588854
to: 2590298
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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