Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <----------DOF2                                                   --                        <---------ALFIN1                                                        -----               --------->ANAC46 <---------ANAC58                                          <----------DOF2        <----------DOF2--------->ZAT18                    <------NtERF2                  <---------ANAC58       <---------DAG2  <---------ZAT18           --------->ZAT14           --------->HSFB2a(2)<------ <-----------RAV1(1)  <-----------------AGL1--------->LBD16                <---------HSFB2a(2)<------ --------AtLEC2<---------ALFIN1 <---------ANAC58 <---------ZAT14    <----------DOF2      <---------ANAC58   tgcatgttgccttttccacacattgcccactctggctttagtcttccccagttctctggccccttctctcctttcttctcgtagttaaactgcgtttcgt  2513100       <---------AHL20(2)     <---------AHL20(2)                                           ---------->DOF2 ---->ZmHOX2a(1)                                        --------->YAB1             --------->YAB1 ----->ID1                                              <---------ICU4       --------->HSFB2a(2) ---ANAC58                      --------->AHL20(2)     <---------YAB1    <---------ANAC58 ---ANAC58              ----------->GT1                --------->ICU4    <---------ANAC58     -------   cctctatattttttttggttatacacgagttaaaaaaaatgtgtttcattaagtctaattataacttataaagaggcttatggaatcatatcaattgaaa  2513200                                                 ------>MYB46(1)                                                 ------>MYB83                                         <---------At4g35610                                         --------->ZAT2                                      ------->GAMYB                     --------->ANAC46                                   <-----------GT1                 --------->ZAT14                            --------->HSFB2a(2)<---------MYB59     <---------ZAT18                  <                        <---------ANAC58 --------->At4g35610  ------>ZmHOX2a(2)              XXXXXXXX  ----------->GT1       <---------ANAC58<-----------ARR10   --------->ARR11(3)     <---------YAB1 --- --->DOF2        ---------->DOF2   --------->MYB52(1)       <---------ARR11(3)   --------->YAB1  ----   gaagttgttaaaaaaaaaaaaaagaggcttatggaattaacggagcttaccaacttctccatgatctggtgaactcgaaacaattgtaatagagatgaag  2513300     ---------->DOF2  <------ZmHOX2a(1)                   <---------ANAC58 <----------ID1                       <---------ANAC58 ---------TOE2(3)          <---------ARR11(3)          <---------LBD16                             -- XXXXXXXXXXXX>MIR854A-E    <---------ARR14(2)     <---------ARR11(3)                           <----- ------>CCA1(2)            --------->ARR14(2)     --------->ARR11(3)       --------->AHL20(2) <------ ----->ARR11(3)            --------->ARR11(3)    <---------CCA1(2)--------->CCA1(2)         xxxxxxxxx   ataaggaaaaagacatagccaattgatggtatcttcattttcttgtgctatatatcttggggagagagatagaagaaaaaaattcaaattttggttttat  2513400                                                     ------------>CBF                                                     <---------ATHB12                                                   *TSS <----------DOF2                                   --------->WOX13(1)       <-----------TBP ---->ZmHOX2a(1)                               --------->YAB1              <----------DOF2 ------GT1                                    <---------YAB1             ------>ZmHOX2a(1) -----GT1      <---------YAB1          --------->ARR11(3)            <-----------GT1 xxxxxxx>smallRNA(i) <---------YAB1    <---------ARR11(3)           <-----------GT1   cctcttttatagctcttattcttatgaaacaacttcaaggagatgttgatcataaatcaattctcttgttttatcctcttttatagctcttattcaagtt  2513500                                                                                                    <                                                                                                <----                                                                                                -----                                                                                                -----                                                                                            ---------                                                                                            <--------                                                                                           --------->AHL20(2)           ------->TEIL                                                                 <---------AHL20(2)        <---------ANAC58                                                               --------->AHL20(2)        <---------ANAC58                                               ----------->GT1 <---------AHL20(1)        <---------ANAC55(1)                                  <----------DOF2           --------->ARR11(3)        --------->ANAC55(2)    --------->TOE2(3)       <---------YAB1 <---------TOE1(3)--------->AHL20(1)        <---------ANAC55(2)    --------->TOE1(3)   <----------DOF2    --------->MYB59  <---------ARR11(3)      <-----------GT1       <-----------GT1     <-----------GT1       <---------TOE2(3)<---------AHL20(2)   aacaaattttacgtgccttagctatagttttcaccttaattttctctaattttctttatgtttctttgtttttaggtaaattgtatcaatatatttaatt  2513600                                                            --------->AHL20(2)       ---------->DOF2                                      <---------AHL20(2)  ---------->DOF2       <---------PCF2                    --------->TOE2(3) ---------AHL20(2) <-----------RAV1(1)                   <--------HAHB4 -----AHL20(2)   <----------DOF2                        <------ZmHOX2a(2) ---->AHL20(2)<---------ARR11(3)             <---------ANAC46--------->AHL20(2) ---->YAB1    --------->ARR11(3)            <------ZmHOX2a(1)<---------AHL20(2) >AHL20(2)   <---------GLK1(1)              ===================HOX2a_HOX2a -AHL20(2)   --------->GLK1(1)  ----------->GT1 <---------ZAT14        --------->ATHB12            <-   atataaaagaaaaggaaatctttgtgggactcaccagttaaatggaggagtgtattggatcattaatttagagtgatttgagtttttatgagttttgata  2513700                                                                                    <---------AHL20(2)                                                                              ------>ZmHOX2a(2)                                      <---------YAB1                        <---------ARR14(2)                                     --------->AHL20(2)                     --------->ARR14(2)                                    --------->YAB1                          <---------AGP1                                   <---------YAB1                           --------->ARR11(3)                                <---------YAB1                              <---------ARR11(3)    <--                              ----------->GT1     <-----------ARR10   <---------ARR14(2)          ---                        <------ZmHOX2a(1)        <---------CCA1(2)    --------->ARR14(2)          --- --------AHL20(2)     --------->MYB59<---------AHL20(2) --------->At4g35610<---------CCA1(2)      <--   tttttttggtgaattttgttgaattaggaaatttgttattaaaattctctcaaatctcatctaaaactatgggatttggatcttatatttttaactaaga  2513800          --------->YAB1    --------->LBD16   <---------HSFB2a(2)                                        --------->ZAT6   --------->HSFC1(1)                   <-----------GT1     --------->YAB1   <---------HSFC1(1)            --------->AHL20(2)  --------->DAG2           <---------ICU4   --------->HSFB2a(2)      <---------TOE1(2)        <---------TOE2(3)        <--------ATHB1 -------HSFC1(2)         ------>ZmHOX2a(2)          ---------->DOF2        --------->YAB1 ------>HSFC1(2)        --------------->AtSPL8     <---------ATHB12      --------->LBD16 ------>HSFB2a(1)       <---------------AtSPL8<-----------------AG      <---------HSFB2a(2)      <--- -------HSFB2a(1)       --------------->AtSPL3<-----------------AGL1    --------->HSFB2a(2)      ----   aatttccagaaataacaatggatttgatcgtacattttaaaattactaatccaataaggcaataacacttgattccagaataattccacttcaaaatttc  2513900                --------->AHL20(2)                --------->ATHB51                <---------AHL20(2)               --------->ICU4            <---------AHL20(2)            --------->AHL20(2)                         <---------AHL20(2)                        <---           <---------WOX13(1)                         --------->AHL20(2)                      <------         --------->ATHB12      <---------AHL20(2)--------->AHL20(2)                         <--------HAHB4        --------->ICU4     <---------YAB1   <---------AHL20(1)                              <--------        <---------YAB1    <---------AHL20(2)<---------AHL20(2)                              ---------      --------->YAB1      --------->AHL20(2)--------->AHL20(1)                             --------->ICU4      <---------ICU4      <---------AHL20(1)--------->AHL20(2)                             <---------ATHB12     <---------ATHB51    --------->YAB1    --------->AHL20(2)                           <---------AHL20(2)     --------->ICU4     <---------YAB1 <---------AHL20(2)                               --------->AHL20(2) ------HSFB2a(2)<---------ICU4 --------->AHL20(2)<---------AHL20(2)                    --------->AHL20(2) ----->HSFB2a(2)--------->ATHB12      --------->AHL20(2)     ------->TEIL    --------->YAB1<---------YAB1   caaaacaattatgattaattatttgtattataattttttataaaattttatttatataaaatgaacgcttcacattcgataagaacacatttaatcatta  2514000  Previous    Next  AGI:  At1g08065.1    Description:  carbonate dehydratase/ zinc ion binding. similar to carbonic anhydrase family protein [Arabidopsis thaliana] (TAIR:AT1G08080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21870.1); contains InterPro domain Carbonic anhydrase, eukaryotic; (InterPro:IPR001148) Range:  from: 2511644    to: 2513451    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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