Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->CCA1(2)                                                                      <------ZmHOX2a(2)                                                                     --------->ARR14(2)                                                                     --------->AGP1                                            --------->ZAT14          <---------ARR11(3)                                   ------>NtERF2                     <---------ARR14(2)                                  --------->ANAC46                   --------->ARR11(3)                                  <---------ETT(1)                 ----------->ARR10             <----------DOF2      --------->LBD16      --------->ANAC55(2)          <---------ATHB12       <---------HSFB2a(2)   <---------ANAC58   ----------->HVH21         --------->ARR14(2) ------>ZmHOX2a(1)          <---------ANAC58------>ZmHOX2a(2)  <----------DOF2      <----------DOF2      <---------ZAT14      ---------->DOF2 <---------DAG2       <---------DAG2 <---------bZIP60(1)      --------->ANAC58 --->ZmHOX2a(1)    ------>ZmHOX2a(1) --------->bZIP60(1)      --------->ANAC58   --------->REM1(2) ------ALFIN1------>ZmHOX2a(1)   --------->HSFB2a(2) <-----------GT1 <---------AGP1   ctccctttcccaatccttttcctccctttcctcttcccgacatcacttcacagttttacttgatacccaaagatctgtgactgtgaagaacagaagaaaa  2421800                                 --------->GLK1(1)                                 <---------GLK1(1)                                <---------ARR11(3)                       <---------GLK1(2)                       <---------ARR14(2)                       --------->ARR14(2)                                                       <----                  --------->MYB52(1)                                                        <--------                 ------->GAMYB  <---------GLK1(2)                                           <--------                --------->MYB46(3)       <---------ATHB12              <-----------GT1      ---------                <---------MYB52(2)  ----------------->AG <---------TOE2(3)                  ---------           --------->YAB1 --------->ANAC58   <---------ATHB12         ---------->DOF2     -----------           ----------->GT1--------->ANAC58 --------->WOX13(1)<------ZmHOX2a(2)        >>>>>>>>>TBF1   attattcagtgaatggtaacgaacagaaacgctagatttccaaatcaatcaattgaattgacgatcgaacaataaaccagatggagaagaagaagatact  2421900                                                                                     --------->LBD16                                                                                    <---------ANAC55(2)                                                                                    <---------ANAC58                                           <---------bZIP60(2)                      <---------ANAC46     --------->ATHB12                   *TSS                                   --------->WRKY38(1)    <---------YAB1                    --------->CCA1(2)                        --------->WRKY12 ------DOF2                           --------->GLK1(1)                        ----------->ARR10 -ARR11(3)                        <---------ANAC46                           <-------GAMYB -ARR14(2)                       <---------LBD16                            <---------ANAC46 >ARR11(3)                     ----------->HVH21                  ----------->TBP   <---------ANAC58 >ARR14(2)          <------ZmHOX2a(2)--------->ARR14(2)          <---------AHL20(1) <---------ANAC55(1) >ARR10           <------ZmHOX2a(1)  <---------ARR14(2)          --------->AHL20(1)------>ZmHOX2a(2)   tttaagatgatttggagagaggatcaattgaatttgacggatatgaagtggctaactaatgtcttaatatataaaactgcgttgatccgtgtgatttttc  2422000                                                             <---------ANAC46                                                             --------->O2                                                             <---------ANAC58                                                             <---------bZIP60(2)                                                             ===================================bZIP_DOF                                                             <---------TGA1a                                                             <---------O2                                                             <---------ANAC58                                                            ----------->STF1                                                           <---------TGA2(2)                                                --------->MYB52(1)                                               ----------->HVH21   <---------WOX13(1)    <---------ARR11(3)                                             <---------ANAC55(2)  <---------ANAC58       --------->ARR11(3)                                             --------->ANAC55(2)  <---------ANAC58   ---------->DOF2                        ----------->GT1 --------->ZAT6<------ZmHOX2a(2)           <---------WOX13(1)                        --------->YAB1<---------DOF5.7(2) ----------->HVH21    <---------AHL20(2)                   ------------>CBF--------->TOE2(3) --------->ARR14(2)        --------->AHL20(2)                   ------>ZmHOX2a(2)--------->DOF5.7(2)   ----------->TGA1    <---------AHL20(1)       <---------MYB52(1)          --------->TOE1(3) <---------ARR14(2)       --------->AHL20(2)    --------->MYB46(3) <---------ATHB12------------>CBF------>ZmHOX2a(2)      <---------AHL20(2) <---   atatcaaccgttgattactgatccaatggttatacatcgttaacaatacttgacggatcgatgacgtggattgctcccaatttaattgaaagatgttgtt  2422100                                               <-----------RAV1(1)                             ------                                               --------->ALFIN1                                <-----                                     --------->AHL20(2)                                       <------                                     <---------ICU4 <------MYB83                              <------                                     <---------AHL20(2)                                    ----------                                     <--------ATHB1<---------MYB46(3)                      <---------                                     --------->ATHB51                                     -----------                                    --------->ICU4 --------->MYB59                        -----------                                    <---------ATHB12<------MYB46(1)                       ----------- ------AHL20(2)                     <---------ATHB51<---------ANAC46 ---------->DOF2----------->RAV1(2)   ttattgaaaaacaaaacaaaaacagcattcgtcttccaataatttgcaagtgttgggtcttattaggccttaaaagagaaaatgaaacctggcccaataa  2422200  ------------>CBF --->YAB1 ---ATHB1 ---ATHB12                               <---------ANAC58 ---ATHB51--------->MYB52(1)             <---------ANAC58 ----->AGL15                          <-----------GT1       <---------YAB1 ------AGL15               <---------ZAT18               <---------MYB52(1) ------>AGL3               --------->ZAT18     --------->ANAC46--------->HSFB2a(2) ->CBF --------->YAB1 <------------CBF*TSS    <---------LBD16  <---------HSFB2a(2) ------>AGL2   --------->AGP1    ---------->DOF2--------->LBD16<---------LBD16                   <---   tagtatcaatactaacagagctagtattgggccctaaaagtttccgtctccgtaaacctgttattctcggagaaacgttgagagagggttttccattctc  2422300                 ----------->HVH21                --------->LBD16               <---------ANAC46              <------NtERF2             ------>NtERF2            <---------DEAR3(1)            --------->DEAR3(1)                                                                 ------           --------->ATERF1(1)                                                                <------ZmHOX2a(2)          <-----------HVH21                                                                  <-------          <---------ATERF1(1)                                                           --------->ZAT18         --------->DEAR3(1)                                                             <---------ZAT14     --------->ATERF1(1)                                                                <---------REM1(2)     <------NtERF2                                                                    --------->REM1(2)     ----------->HVH21                                                                --------->ZAT14    <---------RAP2.6(3)                                                               <---------ZAT14    <-----------HVH21                        <---------MYB52(1) =====================================HOX2a_HOX2a    <---------ATERF1(1)                      <-----------HVH21  ------>ZmHOX2a(1)     <---------ZAT18   --------->RAP2.6(2)                      --------->LBD16     <---------At4g35610 --------------->AtSPL8   --------->ANAC46            ------>ZmHOX2a(1)     <---------YAB1                <---------ANAC46 --------RAV1(1)--------->At5g28300       <---------LBD16 <---------AHL20(2)  <----------DOF2--------   tgtggccgtcaccgtcgccgtgaaatagctctcctctctctatctccggtgagttcttatttattcctctgcgagatgtgcttttctgtgtacacgatct  2422400                                     --------->TOE2(3)                                 <----------DOF2                            --------->SPL7                           <-----------GT1                        <---------------AtSPL8                        <---------------AtSPL3                                       <---------MYB46(3)      <---------LBD16   --------------->AtSPL8                                      <---------WOX13(1) >ZmHOX2a(2)         <---------AHL20(1)         <---------At5g28300              <---------YAB1 --ARR11(3)          --------->AHL20(1)        <-----------GT1               <----------DOF2  <------ ->ARR11(3)          --------->ARR11(3) <-----------GT1                <---------GLK1(1)<---------MYB46(3)   ctcacttcttcggaagcctgaaatattttgtacgactttcattaaccatttaccattttgttatccaatctcgatttctctttctgattgttgttgatga  2422500                                                                                    <------NtERF2                                                                                 <-------GAMYB                                                                                 <------NtERF2                                                                                 --------->ZAT2                                                                                 --------->ATERF1(1)                                                                                 <---------ZAT2                                                                                 --------->At4g35610                                                                                 <---------At4g35610                                                                                <---------ATERF1(1)                                                                                <---------MYB46(3)                                                                                <---------RAP2.3(1)                                                                                ------>NtERF2                                                                                <---------RRTF1(1)                                                                                <---------ERF1                                                                               <---------ANAC46                                                                               <---------DEAR3(1)                                                                               <---------DREB2C(2)                                                                               <---------RAP2.3(3)                                                                               <---------RAP2.3(2)                                                                               --------->ATERF1(2)                                                                               <---------ATERF1(2)                                                                        --------->GLK1(2)                                                              --------->ETT(1) <---------RAP2.6(2)                                                              <---------LBD16  <---------RRTF1(3)                                                    --------->ANAC58 ----------->ARR10          <----                                                    --------->ANAC46<------ZmHOX2a(1)        <------NtERF2                                  ---------->ID1<---------ANAC58    =================================                --------->At4g35610    <---------AHL20(2)     <---------ANAC46 <---------RRTF1(2)               --------->ANAC58  <-------GAMYB  <---------ANAC58<------NtERF2 --------->RAP2.6(3)----   --------->AHL20(2)           --------->MYB52(2)  --------->ANAC58================================= <---------GLK1(2)  ---------->DOF2----------->GT1  --------->ANAC55(2)<---------ARR14(2)   ------>NtERF2 ---YAB1       --------->ANAC58 <---------MYB46(3)  <---------ANAC55(2)<---------GLK1(2)<---------DEAR3(1)   tcagattatataactgcaagctcaaaggaattgtttgttgttaaaatgtttcttacgcgatttgtcgggaggagattcttggcggctgcatcggcgcgat  2422600                    ----------->RAV1(2)                    --------->At4g35610                 <---------At4g35610                 --------->At4g35610                ----------->RAV1(1)              --------->ZAT2             ----------->RAV1(1)             =================RAV           <---------At4g35610           --------->At4g35610                  --------->ARR14(2)        --------->ZAT14                         <---------ARR14(2)        <---------ZAT14         --------->ARR14(2)        ---------->DOF2         <---------ARR14(2)      --------->ANAC46 ------>NtERF2         --------->MYB46(3)   <---------ZAT18  --------->ZAT2         ----------->RAV1(1)   <---------ZAT14  <---------At4g35610    ------>NtERF2   --------->ZAT14  <---------ZAT2      ------>NtERF2                         <---------At4g35610   --------->ZAT18<-----------RAV1(2)  --------->ANAC46                       --------->At4g35610 --ZmHOX2a(2)===================RAV    --------->RAP2.6(2)                ----------->RAV1(1) ===HOX2a_HOX2a ================RAV    --------->ANAC58          <----------DOF2 -->ZmHOX2a(2)--------->At4g35610      --------->ANAC58       <---------ARR11(3)--------->ANAC58 ==HOX2a_HOX2a<---------At4g35610     --------->SPL7          --------->ARR11(3)--------->ANAC58<----   cggagtccactacagcagcagcagctgcctcgacgattcggacgccaacaaatccactcgaagagttctttgagttcgacagaagccaagacgaagataa  2422700  Previous    Next  AGI:  At1g07820.1    Description:  histone H4. Identical to Histone H4 [Arabidopsis Thaliana] (GB:P59259;GB:P02308); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59690.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59970.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT3G53730.1); similar to hypothetical protein OsJ_028319 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44836.1); similar to histone 4 [Elaeis guineensis] (GB:ABD62753.1); similar to histone H4 [Hyacinthus orientalis] (GB:AAT08725.1); contains InterPro domain Histone H4; (InterPro:IPR001951); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histon Range:  from: 2421215    to: 2421940    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07830.1    Description:  ribosomal protein L29 family protein. similar to unknown [Populus trichocarpa] (GB:ABK93723.1); contains InterPro domain Ribosomal protein L47, mitochondrial; (InterPro:IPR010729); contains InterPro domain Ribosomal protein L29; (InterPro:IPR001854) Range:  from: 2422238    to: 2423652    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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