Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------WRKY45                                                                                     <---------WRKY12                                                                                  <---------MYB46(3)                                                                             <---------At5g28300                                 ----------->RAV1(1)                        --------->YAB1                                --------->REM1(1)                        ------>MYB83<---------WRKY38(1)              --------->YAB1  <---------HSFB2a(2)        --------->At4g35610<<<<<<<<<<<<<<<<<LFY   <-             <---------YAB1   --------->HSFB2a(2)      --------->YAB1    ------>MYB46(1)    <--------        >>>>>>>>>>WRKY63  <----------DOF2     <------ZmHOX2a(2)        <---------MYB59---------->DOF2  ------>ZmHOX2a(2)    <-----------GT1       <---------ARR11(3)        --------->TOE2(3)   <-------TEIL ---------ARR11(3)   <-----------GT1         --------->ARR11(3)     <-----------GT1 --------->WRKY18(1)   gtgatctatttgactatcatatttttcactttctacaacaaaaatcagatcatagaatcagcatcacaataaacctaatcacagtggtcaaagtgcatga  2405500      --------->DAG2                 <------ZmHOX2a(2)     ---------->DOF2         ---------->DOF2  --------->TOE2(3)         <---------ATHB12  --------->YAB1            --------->ICU4           <---------ARR11(3)  --------->TOE1(3)    --------->ANAC58              --------->ARR11(3) <---------YAB1        --------->ANAC58          ---------->DOF2 ----------GT1       ---------->DOF2<---------ARR11(3)             ---------->DOF2 -AtLEC2         <----------DOF2    --------->ARR11(3)<------ZmHOX2a(2)     --------->At4g35610------   attaccataaagttgacaacttttaaagcaataaagaagatcagaacatagaaaagatcaaaaaccctcaaaagaagaagcagagtgatgaaatcgaaca  2405600                             ---------->DOF2                 --------->TOE2(3)                            <---------ATHB12                 --------->TOE1(3)                       --------->ANAC58               --------->MYB52(1)                       --------->ANAC58    <---------YAB1  ------->TEIL                       ------>ZmHOX2a(2) <----------DOF2<---------MYB52(2)             <------ZmHOX2a(1)              --------->ANAC58 ----------->GT1<---------HSFB2a(2)               --------->TOE2(3)---- --->MYB46(3) --------->ANAC58--------->DAG2  --------->HSFB2a(2)         --------->ANAC46 --------->YAB1   aacccattatacaaaaacgcatggatcgcaataaagtagaaaacttttatagaaaaaaacgaaccttgaagaacataagcgaccttagaggaatcagagt  2405700                                                                                                    <                                                                                                    =                                           ------>NtERF2                                            -                                         --------->At4g35610                            --------->AtLEC2                                        <---------ATERF1(1)                           <-----------RAV1(2)                                        <---------RAP2.3(1)                         ----------->RAV1(1)                                        <<<<<<<<<AtERF-4                          <---------ZAT18  <-                                       <---------RAP2.6(2)                   ----------->RAV1(2)   --            --------->ANAC58           <---------RAP2.3(2)                   ------>ZmHOX2a(1)     <-            --------->ANAC58          <---------At4g35610                    ========================        <---------At4g35610         ---------->CDC5                          ===================RAV--        --------->At4g35610      <---------ZAT2                          <---------ALFIN1        ----   ----------->HVH21            --------->ANAC58    <---------At5g28300 <---------At4g35610 <------NtERF2 ----->MYB52(1)                 --------->ANAC58   <-----------GT1--------->At4g35610<------NtERF2 --   aacgagggacagcgaagccattcttctcaagagcaagcttagcggctccaatgttaccctgtttgagcatcggcaactcctctgggcaccaggcagagta  2405800            ------>ZmHOX2a(1)     <---------ALFIN1     --------->AtMYB61                                                                           <--- --------->MYB46(3)                                                                              <--- ------ZmHOX2a(2)                                                                             ------- ==================HOX2a_HOX2a                --------->CCA1(2)                               ------- -------->CCA1(2)                             <------ZmHOX2a(2)                              <------- --------ARR14(2)                            <---------ARR11(3)                              -------- ------->AGP1                                --------->AGP1                      ---------->DOF2----- --------ARR11(3)                            --------->ARR11(3)           ---------->DOF2    -------- ======HOX2a_HOX2a                           --------->ARR14(2)      ------------------------>ANAC81- ------->ARR14(2)                            <---------ARR14(2)--------->HSFB2a(2)         ---------- ------->ARR10 --------->LBD16         <---------REM1(1)       <---------HSFB2a(2)       ---------->DOF2 ------->ARR11(3)                    <---------ANAC46       <-----------GT1   ----------->GT1--------   agatccaccatctcctccgtaaaccttcttgggcaacttaggtgtaagatccaactccattttttctcgacgatgaaaaagagtaaagaagaaaagattt  2405900                                                                <-----------TBP  <---------TOE2(3)                                             --------->AHL20(2) ---MYB46(1)                                                    <---------AHL20(2) ---MYB83                                                     <-----------TBP -->ARR14(1)                                              --------->ANAC58 -->CCA1(2)                                               <---------ANAC55(2) --ARR14(2)                                               --------->ANAC55(1)               <<<<<<<<<MYB98 ->ARR14(2)                                               --------->ANAC55(2)          ------------>MYB.PH3(1) ---->MYB59                                               --------->ANAC58             --------->ARR14(2) ->ARR11(1)   >>>>>>>>>TBF1                             <---------ALFIN1               --------->GLK1(2) --------->DOF2                                      ----------->HVH21                 <---------ARR14(2) ->ARR10>>>>>>>>>TBF1                            --------->CCA1(2)     <------ZmHOX2a(1)    <-------- ->ARR11(3)>>>>>>>>>TBF1                *TSS---------->DOF2  ------->TEIL         ----------->GT1   ggtaaaggaagaagaagaagaagtagtaagttttgatgtgaaatgtgaaagagatgcgacacgtatttatataggagaggcttagggtgaatccgttact  2406000                           <---------ANAC55(2)                        <---------WOX13(1)                       <---------ANAC58                       <---------ANAC58                       <------------CBF<---------ANAC58                      --------->ATHB12 <---------ANAC58                     <---------YAB1  <---------AHL20(2)     <---------TOE2(3)               ---------->ID1        <-----------GT1        <---------TOE1(3)            <----------DOF2             <---------DEAR3(1) <---------YAB1             <-----------GT1      <-----------GT1    --         --------->ATHB12  <---------ANAC58       <---------YAB1             --------->AHL20(2)    -- -MYB52(1)<---------GLK1(2)<---------ANAC58<---------ANAC46<---------DOF5.7(2)<---------AHL20(2)   --   aatagagagactgattcggcgttttgattgcgttacgatttacttgtggataattcttgtttaacgtttttaatccaaattttatccatttctttatgcc  2406100                         ------>MYB46(1)                         ------>MYB83                       --------------->AGL15                       <---------MYB59                       <---------------AGL15                      ----------------->AGL3                     ------>MYB46(1)                     ------>MYB83         --------->AHL20(2)         <---------AHL20(2) ---------->DOF2        <---------AHL20(2) --------->AHL20(2)   <---------ARR11(3)    <---------AHL20(2)----------------->AGL2  ----------->GT1   --------->AHL20(2)-------->P  --------->GLK1(2) ------->ANAC58   <---------ANAC58           <------ZmHOX2a(1)                <---------MYB52(1) ------->ANAC46   <---------ANAC58   <----------DOF2            --------->WOX13(1)     --------->YAB1 ------->ANAC58 <-----------GT1 <---------GLK1(2)   <---------YAB1         ---------->ID1           <   cacgatataatttatattttgcctaccaaataaagattcctttgtgaggagataatttttgttaatccatcacgttcttcgtttttttttcataaacaaa  2406200                                                                                                <----                                                                                             <-------                                                                                             --------                                                                                           <---------ICU4                                               <<<<<<<<<<WRKY43                            --------->YAB1                                               <<<<<<<<<<WRKY38                 <---------AHL20(1)                             --------->DAG2    <<<<<<<<<<WRKY26                 <---------ARR11(3)                            ---------->DOF2  ----------->GT1    <---------GLK1(2)         <---------ATHB51                  <---------AHL20(2)         <------MYB46(1) --------->YAB1     --------->AHL20(1)                 <---------AHL20(2)          <------MYB83 --------->YAB1        --------->ARR11(3)             <---------AHL20(2)             --------->MYB59 --------->At4g35610<---------AHL20(2)             --------->AHL20(2)  --------->ZAT18<---------WRKY38(1)           --------->ICU4 -------- ---------YAB1   --------->AHL20(2)<---------ANAC46      <---------ATHB12----------->GT1  <---------ATHB12   tactaattgagacatttaaataaatctactaaaagtgctgtattatttggtcaaatcgaatcatcagaatatttgttgtaaatattttctcaattatgtc  2406300                                                                    ---------->DOF2          ----------------->AGL1                     --------------->AGL15          ----------------->AG          =============================MADS_MADS       <----------DOF2                  --------------->AGL15  <---------AHL20(2)      <---------ANAC58     <---------YAB1<----------DOF2---------->DOF2      <---------ANAC58     <---------TOE1(3)         --------->TOE2(3)  <------ZmHOX2a(1)    <-----------GT1        <---------TOE2(3)         --------->TOE1(3)<---------TOE2(3) -------GT1      <------MYB46(1)        <---------------AGL15 --------->AHL20(2) --bZIP60(1)     ----------->GT1 <---------YAB1     ----------------->AGL1 ->bZIP60(1)     <------MYB83--------->ARR11(3)   <-----------GT1  --------->AHL20(2)     <---------TOE2(2) ->TGA2(1)==============================================MADS_MADS  <---------AHL20(2)     <---------TOE1(2)   accatatttctttccaatttggtgattttaagattatgttttcctttttttgttaccttaaagataaaattaaaggatgaattcaaaaatcgtatgtttt  2406400  Previous    Next  AGI:  At1g07750.1    Description:  cupin family protein. similar to cupin family protein [Arabidopsis thaliana] (TAIR:AT2G28680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24149.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain 11-S plant seed storage protein; (InterPro:IPR006044) Range:  from: 2404034    to: 2405940    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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