Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------AHL20(2)                  <---------ANAC58        --------->AHL20(2)                                <--------                  <---------ANAC46     --------->YAB1                                --------->YAB1 -                  <---------ANAC58  --------->YAB1    <---------AHL20(2)            <---------YAB1 <-       <-----------GT1      ---------->DOF2  <---------ATHB12                     --------->YAB1   --    <---------ANAC55(2)<---------------------WRI1  ------->TEIL                  <---------ZAT6   ---    --------->ANAC55(2)<---------PCF2--------->AHL20(2)        <----------DOF2 ----------->GT1-------   gtcaatatgtaacccatttatcgtgggccataaacccaaaataataaatcatgtatataaacgggctattgggccataaactagtgataataagctttgg  2203900                    --------->ANAC58                    --------->ANAC58                <-----------HVH21               --------->bZIP60(2)               --------->ANAC46               <---------ANAC55(2)               --------->ANAC55(2)                                                     ==============               --------->O2                                                            --------->O2               --------->ANAC55(1)                                                   ----------->RAV1(1)               --------->ANAC58                                                      <---------ALFIN1               --------->ANAC58                                                   --------->PCF2            <---------ARR14(2)                                                    ------>NtERF2      ------>ZmHOX2a(2)                                   <---------ARR14(2)     <---------RAP2.3(1)     <---------GLK1(1)                                    --------->ARR14(2)     <-----------TCP11(1)     <------ZmHOX2a(2)                                <---------At4g35610       <---------ANAC58    --------->ARR11(3)                                --------->At4g35610   <---------ANAC58    <---------ARR11(3)                                <------NtERF2         <---------ANAC58 <------NtERF2<-----------STF1                      <---------WRKY38(1) =========================bZIP_DOF --DOF2 <---------LBD16                             <---------WRKY12    <----------DOF2--------->TGA1a ----->NtERF2 <-------TEIL                   <------ZmHOX2a(2)   ------>NtERF2  <---------ANAC58 --------DEAR3(1)----------->HVH21           ==================================HOX2a_HOX2a --------->HVH21<-----------TGA1             <---------ATHB12   --------->ANAC46<---------RAP2.3(2) ------>ATERF1(1)--------->TGA2(2)       --------->MYB46(3)     <---------ETT(1)<---------RAP2.6(2) -->ALFIN1  --------->ARR14(2)      --------->YAB1<-----------HVH21     ------>ZmHOX2a(1)      <-----   ggcgacgatctctggatacgtcacccctcgcgatacaattacaaccgatcaaggtcagcgaatactccgacatccttttcttgcggcccacatcggtctt  2204000                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------ANAC46                                          <---------ARR14(2)                                 <---------ANAC58 <---------TOE1(3)                             <---------ANAC46 --------->At4g35610                             <---------ANAC58 <---------At4g35610                             <---------ANAC58 --------->ZAT2                            --------->MYB52(2)<---------ZAT2                    <-----------GT1                          <---------MYB52(1)  ----------->RAV1(2)--------->AHL20(2)                        <---------ANAC58  <---------ARR11(3)     <---------AHL20(1) =====bZIP_DOF          <---------ANAC58  --------->ARR14(2)     <---------AHL20(2)      <----------DOF2 -----DOF2     <-----------GT1   <---------ANAC58 <---------TOE2(3) <---------YAB1   <---------ALFIN1   tagtgaatcacatgttttttctattgtcgtttcttgcgcatcaagttctgctgaggtttcttgttattttatttttgaaatttttcaacacctttaactt  2204100                                  --------->MYB52(1)                                <---------ATHB12                                <---------MYB55(2)                                --------->MYB46(3)                               --------->ANAC58                               ------>MYB46(1)                               ------>MYB83                               --------->ANAC58                               -------->P                         --------->ANAC58                                   <-----------RAV1(1)     -                         --------->ANAC58                          <---------AHL20(2)          <-----           <-----------GT1 --------->ANAC46                       --------->AHL20(2)    ---------->DOF2   atctcgattttgtttaccacttaaaaaacgcccaaccaatggcatacactgaaaatgttttctaaacatttaatatttctgtggctaccaaaaagaaatc  2204200                                                       <---------MYB59                                                       --------------->AGL15                                                       <---------------AGL15                                                      ----------------->AG                                                      ----------------->AGL1                                                      ----------------->AGL2                                                      <-----------------AGL1                                                      ===============================================                                                      <-----------------AGL3                                                      <-----------------AGL2                                               <-----------HVH21                                            <---------ZAT2                                            --------->At4g35610       <------MYB46(1)                                            <---------At4g35610       <------MYB83                                            --------->TGA1a          <---------TOE1(2)            ---                                            <---------O2             <---------TOE2(2)      ---------                                            ----------->RAV1(2)   --------->TGA1a          ----------                         =============================bZIP_DOF    --------->ANAC58       <---------At5g28300                         ---------->DOF2    --------->ZAT2        --------->ANAC58 <---------ANAC55(1)       <-----------GT1 ----------->HVH21    --------->O2          <---------TGA1a  <---------ANAC55(2) ---------->GT1   <---------LBD16          ------>NtERF2------>ZmHOX2a(1)          --------->ANAC55(2) ----ATHB12  --------->AHL20(2)           <---------ALFIN1--------->GLK1(2)        --------->ANAC55(1)   aagagttattttccatttattctgggtgaaagagaaacagagtgccacctgtcatttcctaatctggcacgtaggtttttctcatacgtattacagtgaa  2204300                   <---------ANAC46                   *TSS                  <---------ZAT2                  <------NtERF2                  --------->ATERF1(1)                 ------>NtERF2                 <---------ATERF1(1)                 <---------ERF1                 <---------DEAR4(2)                 <---------DEAR3(2)                 <---------RAP2.3(1)                <---------RAP2.3(3)                <---------RAP2.3(2)                      <------MYB83                <---------RAP2.6(2)               <---------------AGL15                <---------DEAR3(1)                --------------->AGL15               --------->RAP2.6(3)                ------->GAMYB             --------->DAG2                      <-----------------AG      <---------ZAT14    <---------At4g35610     --------->MYB46(3) ==================================================================MADS_MADS ------>YAB1---------->DOF2            <---------GLK1(2) <------MYB46(1)   <---------ANAC58 >At5g28300---------->DOF2       <---------MYB46(3)     --------->MYB59    <---------ANAC58  <------- ->GT1--------->ZAT14    --------->At4g35610   <-----------GT1      <---------YAB1 --------->ATHB12<-   taatacagtataccaaaggcggctcgtagcagagtttgttcgattctcttaaccacattaggtttggagtattatttgcttctctcgattgaagaagagt  2204400                                                                                            <--------                                                                     ------->MYC3     --------->GLK1(2)                                   <---------GLK1(2)                 <-------MYC3     --------->ARR14(2)             <---------ANAC46    --------->ANAC58                   --------->ANAC55(2)    --------->ZAT14          <-----------RAV1(1)    --------->ANAC58                   <---------ANAC55(1)   ------>ZmHOX2a(1)        --------->YAB1        --------->STY1(2)                  <---------ARR14(2)   <---------ARR11(1)      --------->GLK1(2)      ------>MYB83  --------->DEAR3(1) --------->ETT(1)        <---------ARR14(2) ---------->DOF2             ------>MYB46(1)   <---------ALFIN1  --------->ARR14(2)--------->LBD16 --------AtSPL8            --------->TOE1(2)  <---------ZAT18 <---------ANAC46<---------GLK1(1) --------MYB59     <------ZmHOX2a(2)--------->GLK1(2)      <-----------RAV1(1)--------->GLK1(1)   acctaaagaatcatgttgtggatcaaaaacctagcaagaatctcgcagaccacttcttcgtctgtcggaaacgtgttcagaaaccccgaatcctacactc  2204500                                          <---------REM1(2)                                        ----------->HVH21                                        --------->ANAC46                                        ------->GAMYB                                       --------->DEAR3(2)                                       <------------AtMYB77                                       --------->MYB46(3)                                     --------->MYB52(1)                                   <---------MYB52(2)                                  --------->ANAC46                                  --------->ANAC58  --------->AtLEC2                 <---------ZAT14  --------->ANAC58  --------->ANAC58                 --------->ZAT14  --------->ANAC55(1)                <---------ALFIN1  --------->ANAC55(2)                --------->DEAR3(1)<---------ANAC55(2)  ---------->DOF2             <---------ALFIN1 ----------->RAV1(1)   --------->ANAC58            <---------ZAT14  <----------ID1         --------->ANAC46          --------->ALFIN1            --------->ZAT14--------->ANAC46  --------->ANAC58              <---------ANAC58        --------->ARR14(2) --------->ANAC58  --------->ANAC58              <---------ANAC58         <       <---------MYB52(1)---------->DOF2--------->At1g77200     <---------REM1(1)                 <-- -ALFIN1<---------ARR14(2) --------->ANAC58<---------ALFIN1   <------ZmHOX2a(1)                   <--   tctcgtcccgtttctgcaccgctctgcaaaagcaacaagtaaccgacacggttcaagcaaaggaggatgtagttaatgcgttggagccacaacgttacga  2204600                                                               <--------P                                                              <-------GAMYB                                                             <------NtERF2                                                            <---------MYB46(3)                                                           <---------ANAC46                                                           <---------ANAC58             ---------->DOF2                              <---------LBD16           --------->ANAC58                              <---------ANAC46           --------->ANAC58                             <------MYB46(1)         ------>NtERF2                                  <------MYB83 ----------->GT1        ----------->HVH21                               <---------MYB46(3)        --------->DEAR3(1)                             <---------AtMYB61       --------->ATERF1(1)                             --------->ALFIN1       --------->DEAR3(2)                             --------->ALFIN1      ---------->DOF2       <------NtERF2                                  <--------P<---------MYB46(3) ---------MYB52(1)                                <---------ANAC46 <---------ANAC46                -- -------DEAR3(2)                                <-----------HVH21  --------->ETT(1) ------>ZmHOX2a(2) -------MYB46(3)          --------->GLK1(2) <---------LBD16<---------ANAC58<---------AHL20(2)    <---   cggtttggctccgacgaaagagggagagaagccgagagttttggttctcgggtcgggttgggcgggttgtcgggtattaaaagggatcgatactagtatt  2204700                                                                      --------->ANAC58                                     --------->ZAT14                  --------->ANAC58                                 <---------ARR11(3)                <---------SPL7                              <-------MYC3                        <------MYB46(1)                  --                              ------->MYC3                        <------MYB83                     --                           <---------ALFIN1                       <---------DEAR3(2)      <---------At4g35610                          --------->MYB46(3)                      <---------MYB46(3)      --------->At4g35610       <---------MYB52(1)XXXXXXXXXXXXXXXXXXXXX>MIR2935           <---------AtMYB61     <-------GAMYB  <---------bZIP60(1)   --------->ARR14(2)                     <-------GAMYB           <---------At4g35610  <---------O2         <------ZmHOX2a(1)                      <---------ANAC58        --------->MYB52(2)  --------->O2      --------->HSFB2a(2)             <---------ANAC58 <---------ZAT18  <-----------RAV1(1)  --------->bZIP60(1)<---------TOE1(2)      ------>ZmHOX2a(1) <---------ANAC46        <---------DEAR3(2) ------->ANAC46     <---------HSFB2a(2) --------->ANAC46      <---------ANAC58   --------->MYB59----- --------GT1        ------>ZmHOX2a(1)<---------ZAT14<---------ANAC58 --------->SPL7   <---------MYB46(3)   tacgacgtcgtttgtgtctctcctaggaaccacatggtcttcactcctctcttggcttctacttgcgttggtacgcttgagtttaggtctgttgctgaac  2204800  Previous    Next  AGI:  At1g07180.1    Description:  ATNDI1/NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1); NADH dehydrogenase. similar to NDA2 (ALTERNATIVE NAD(P)H DEHYDROGENASE 2), NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G29990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21440.1); similar to putative internal rotenone-insensitive NADH dehydrogenase [Solanum tuberosum] (GB:CAB52796.1); similar to unknown [Populus trichocarpa] (GB:ABK95883.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327) Range:  from: 2204319    to: 2206933    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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