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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
TOE2(3)
<xxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
------>
NtERF2
----------->
RAV1(1)
<---------
ETT(1)
--------->
ANAC46
--------->
ZAT2
--------->
O2
--------->
At4g35610
<---------
O2
<---------
ZAT2
<-------
TEIL
--------->
HSFC1(2)
<---------
GLK1(2)
<------
ZmHOX2a(1)
----------->
HVH21
<-----------
GT1
<------
ZmHOX2a(1)
<---------
At4g35610
--------->
CCA1(2)
<---------
ANAC58
<---------
HSFC1(2)
<---------
ARR14(2)
<---------
ANAC46
------->
TEIL
---------->
DOF2
-------
<---------------
AGL15
<-----------
RAV1(2)
----------->
ARR10
--------->
ARR14(2)
<---------
ZAT2
<---------
ARR11(3)
<---------
ANAC58
--------->
MYB52(1)
<---------
DOF5.7(2)
<---------
At4g35610
--------->
ARR11(3)
<-----------------------
TaNAC69(2)
--------->
DOF5.7(2)
--------->
At4g35610
taaacaagttctccaaactgagtaatac
cgtgatcaggaggaacaacgaagcttagctccgacattaacgcagattcacgttgcatcggaag
ctgttaaa
2183700
--------->
YAB1
<---------
ATHB12
--------->
ANAC58
--------->
ANAC58
--------->
WOX13(1)
--------->
ANAC58
--------->
ANAC58
<---------
WOX13(1)
--------->
ANAC46
--------->
AHL20(2)
--------->
ARR14(2)
------->
TEIL
----------->
GT1
<---------
AHL20(2)
<---------
ARR14(2)
--------->
LBD16
----------->
GT1
--->
DOF2
--------->
MYB52(1)
<---------
HSFB2a(2)
---------->
DOF2
<---
gaagaattaattgacaacaagacgacggagaaacgcaatcaaaattcccgatgaatgaatcggaaggaaagacgaagaagataaaacaaaaatcaaacag
2183800
--------->
MYB46(3)
--------->
DEAR3(2)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
LBD16
--------->
ANAC46
<---------
TOE1(2)
------>
ZmHOX2a(2)
=========================
HOX2a_HOX2a
=============
HOX2a_HOX2a
<------
ZmHOX2a(2)
==========================
HOX2a_HOX2a
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
<------
ZmHOX2a(1)
--------->
HSFB2a(1)
--------->
HSFC1(2)
<---------
HSFC1(2)
------>
ZmHOX2a(1)
--------------------->
WRI1
<---------
At4g35610
<-----------
<----------
DOF2
<------
ZmHOX2a(1)
--------->
At4g35610
------------
--------->
ZAT2
<---------
LBD16
<---------
ZAT18
-------------
<---------
ZAT2
--------->
TOE1(2)
--------->
ZAT18
--------->
TOE1(3)
<----
------
GLK1(2)
<---------
HSFB2a(1)
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
--------->
TOE2(3)
<------
atgctcac
agctttggaaggatcccaggaaccgatgagaggaagagagccatagacatgaggagtgagctctccttcaaccttagagttttccattttga
2183900
------>
NtERF2
--------->
DEAR3(1)
--------->
ANAC46
--------->
ANAC58
--------->
ANAC58
<---------
ALFIN1
--------->
DEAR3(1)
--------->
AtMYB61
------>
ZmHOX2a(1)
--------->
ZAT2
--------->
TOE2(3)
--------->
AtMYB61
<---------
At4g35610
<---------
ALFIN1
--------->
At4g35610
--------->
MYB55(1)
--------->
ZAT2
--------------------->
WRI1
<---------
ALFIN1
--------->
At4g35610
--------->
YAB1
<---------
MYB55(2)
<---------
At4g35610
<---------
HSFC1(2)
----------->
HVH21
----
AGL15
----------->
HVH21
--------->
MYB46(3)
<---------
MYB111(1)
<--
--->
AGL15
--------->
WRKY12
--------->
HSFB2a(1)
<---------
At4g35610
--------->
DEAR3(1)
---->
AGL1
--------->
WRKY38(1)
<---------
HSFB2a(1)
----------->
RAV1(2)
------>
MYB83
<--
-----
ANAC46
--------->
MYB46(3)
--------->
HSFC1(2)
--------->
At4g35610
------>
MYB46(1)
---
YAB1
<---------
AGP1
--------->
LBD16
<-----------
TGA1
------->
TEIL
--------->
MYB46(3)
gtgaaacgtagagctgaccacctccgccattggaaccatcgtcatcttcctcagtattcttcgatgcacctgaccccat
cgaaacccaccgtctcaattc
2184000
<----------
DOF2
<---------
DAG2
--------->
LBD16
--------->
ANAC55(2)
--------->
HSFB2a(2)
--------->
YAB1
--------------->
AtSPL8
<---------
AHL20(2)
--------------->
AtSPL3
--------->
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
----------->
GT1
-------
DAG2
<---------
AtLEC2
----------->
RAV1(1)
--------->
CCA1(2)
--------
DOF2
<---------
YAB1
<----------
ID1
--------->
MYB52(1)
---------->
DOF2
ctttttcccgtacttttctgttttgaatgaattaataagaagaagagattgcgacacagaaaaaatcaaacggataagagatttgagagaaagagagaag
2184100
<-----
<-----
<-----------
RAV1(1)
<-----
--------->
KAN4(2)
------
--------->
ARR14(2)
<-------
<----------
DOF2
<---------
ARR14(2)
<--------
<---------
DAG2
<---------
MYB52(1)
<---------
MYB46(3)
<---------
ZAT2
<---------
MYB52(1)
--------->
ATHB12
<---------
At4g35610
--------->
LBD16
<---------
YAB1
<---------
At4g35610
<---------
ANAC46
--------->
MYB52(1)
--------->
ALFIN1
--------->
LBD16
<---------
LBD16
<---------
ARR14(2)
<---------
ANAC55(2)
--------->
ANAC46
--------->
GLK1(2)
<---------
GLK1(1)
<---------
ANAC58
<---------
LBD16
<---------
ARR14(2)
<------------
CBF
<---------
ANAC58
--------->
ZAT2
<---------
HSFB2a(1)
--------->
ZAT18
--------->
ARR14(2)
--------->
At4g35610
--------->
HSFB2a(1)
<-------
TEIL
--------->
LBD16
--------->
ANAC55(2)
<---------
ZAT2
<----------
TaMYB80
<-----------
RAV1(1)
<---------
ARR14(2)
<---------
At4g35610
----------->
GT1
*
TSS
--------->
ALFIN1
<---------
LBD16
<-------
TEIL
cgaagtcgctagctccgcagcttttttttgtctgggaaattccggtt
attctctgtggtgcattgggataaccggataagagcaaatacgtggtgattgg
2184200
----
<------------
CBF
------>
MYB46(1)
------>
ZmHOX2a(2)
--------->
ATHB51
------>
MYB83
<------
-
MYB83
--------->
ATHB12
--------->
MYB46(3)
-------
----
MYB46(3)
<---------
YAB1
--------->
DEAR3(1)
---------
-
MYB46(1)
<---------
YAB1
--------->
DREB2C(2)
<--------
----->
GT1
<---------
AHL20(2)
--------->
DEAR3(2)
<------
MYB83
--
WOX13(1)
<---------
ANAC58
<-----------
GT1
<------
MYB46(1)
----
CBF
<-------
TEIL
<---------
ANAC58
<-----------
HVH21
--------->
MYB59
ttaacttggtttagcttcattttgggctgggcttgttttttattattgggcctatgtcaccgactggtgagaagctctgagagtttatttggtcgatctt
2184300
------>
ZmHOX2a(1)
--------->
TOE1(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
AGP1
<---------
GLK1(2)
<---------
At4g35610
<---------
ANAC58
=====================
HOX2a_HOX2a
<---------
ANAC58
------>
ZmHOX2a(1)
*
TSS
<---------
AHL20(2)
----->
AHL20(2)
<---------
ZAT14
<---------
ARR14(2)
-----------
AGL3
--------->
ZAT14
<---------
At4g35610
---------->
AGL3
<---------
ZAT18
----------->
ARR10
<---------
MYB52(1)
>
ARR11(3)
--------->
ZAT18
<-----------
HVH21
<---------
YAB1
--------->
AHL20(2)
-------
-
ARR11(3)
------------>
CBF
====================
HOX2a_HOX2a
----------->
RAV1(1)
<----------
DOF2
aaaatagagccttgtcaatagttcactctccttcagcgttcagat
cctgagagttttattgagcgccattaatttcttctctcttttgggttttaagcgc
2184400
<---------
AHL20(2)
--------->
YAB1
----------->
GT1
--------->
TOE2(3)
<---------
YAB1
--------->
YAB1
<
------->
TEIL
--------->
MYB52(1)
--------->
AHL20(2)
--------->
GLK1(2)
<---------
MYB52(1)
<
-->
ANAC46
--------->
TOE1(3)
--------->
ICU4
<---------
ARR14(2)
<-----------
HVH21
catgaatttcgaaaacctcaaatcacaaaaccgatggtgatgataaaaaattcgactgccgaagagaaactggaatcagagtcgtttgtcactcgtatta
2184500
<----------
DOF2
<---------
ANAC58
<----------
DOF2
----------->
HVH21
<---------
ANAC58
<---------
TOE1(2)
----------->
RAV1(2)
--------->
ATHB12
<---------
TOE2(2)
---------->
ID1
<---------
MYB52(1)
<---------
YAB1
--------->
LBD16
<------------------------
ANAC81
<-----------
HVH21
--------->
AHL20(2)
<-
---------
TOE1(1)
<------------------------
ANAC81
<---------
ANAC58
<---------
ZAT6
---------
---------
TOE2(1)
<----------
DOF2
<-----------
GT1
<---------
ANAC58
----------->
GT1
<---------
ZAT6
atccgag
gtttgctctttcgcttctctgtttttgtttttcgttttcgcctgaagttttccgtcggattgagacttggtgttaaaattgattgtgttattg
2184600
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AGI:
At1g07110.1
Description:
F2KP (FRUCTOSE-2,6-BISPHOSPHATASE); fructose-2,6-bisphosphate 2-phosphatase. similar to fructose-6-phosphate 2-kinase-related / fructose-2,6-bisphosphatase-related [Arabidopsis thaliana] (TAIR:AT3G30200.1); similar to fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase [Bruguiera gymnorrhiza] (GB:BAB55655.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21422.1); similar to unknown [Populus trichocarpa] (GB:ABK94943.1); contains InterPro domain Phosphoglycerate mutase (InterPro:IPR013078); contains InterPro domain Carbohydrate-binding-like fold; (InterPro:IPR013784); contains InterPro domain Glycoside hydrolase, carbohydra
Range:
from: 2178103
to: 2184147
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g07119.1
Description:
other RNA
Range:
from: 2184346
to: 2186538
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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