Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ------>ZmHOX2a(2)                                                =================================HOX2a_HOX2a                                               ==================================HOX2a_HOX2a                                               <------ZmHOX2a(2)          <------ZmHOX2a(1)                      ---------->DOF2         <---------ARR14(2)        <---------TOE2(3)       <------ZmHOX2a(1)                      --------->ARR14(2)     <---------ARR14(2) --->AGL15  --------->ANAC58                <---------DEAR3(2)<---------ANAC58           --------->DAG2 ---->AGL3  --------->ANAC58             <-----------HVH21    <---------ANAC58          ---------->DOF2   gaaaccataggagaacgaaatacagaaagtctaattcgaaaaccgtcggatccttggggtctaggcttgcagataaggaaacgagagacaaaaagagaag  1969300                                  <---------ARR14(2)                                  --------->ARR14(2)           <------NtERF2                              --------->ATERF1(1)   <------NtERF2                              <---------LBD16      --------->LBD16                              <------NtERF2       <---------ANAC46                            <---------DEAR3(1)    <---------LBD16                           --------->ATERF1(1)    --------->LBD16                          <---------MYB46(3)      --------->ETT(1)           ----------->RAV1(2)                         --------->ALFIN1        <---------LBD16        <---------At4g35610   <------                       <---------ANAC46 <---------ARR14(2)   <---------DEAR3(1)           --------->At5g28300                      <---------DEAR3(1)--------->ARR14(2)  --------->At4g35610   <-----------HVH21                     <-------TEIL<------NtERF2   <---------ANAC46       --------->At4g35610----------                  --------->CCA1(2)  --------->YAB1------>NtERF2        <------NtERF2   <---------DEAR3(1)          <----------ID1 <---------AtMYB61    <--------P    <---------At4g35610  <---------ANAC46  <-   gggaataccaaggggacgagagatgcggtggaggcggaatcgtaactggttgccgggaagtgagcggcgaaggcagcgagcctgcgtcgagcggtgatag  1969400                          ============================HOX2a_HOX2a         <------ZmHOX2a(1)                          ------>ZmHOX2a(2)                            <-----------RAV1(2)                  --------->ATHB12                            --------->ZAT14<------ZmHOX2a(1)      -       <---------ALFIN1   <---------MYB46(3)   <------ZmHOX2a(1)  ----------->HVH21    ------>ZmHOX2a(2) ---WOX13(1)    <---------WOX13(1)            <----------ID1  <---------ZAT14=================HOX2a_HOX2a ->HVH21      --------->ATHB12             ---------->DOF2  <---------WOX13(1)      <------ZmHOX2a(1) ------TEIL  <---------YAB1           ----------->GT1     --------->ATHB12====================HOX2a_HOX2a   attcatgctccatctctgattgattcgatcggtgaagaaatagagaaaaggacgagcgagtgattgcagtgacacaggaggaagtaggatcgatgaaaca  1969500                                                                      --------->MYB52(1)                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                   --------->LBD16                                                                  --------->HSFB2a(2)                                         <----------DOF2         ----------------->AGL1                                   <---------ARR11(3)            <-----------------AGL1                                   <---------ARR14(2)       *TSS <---------LBD16                                   --------->ARR11(3)   <---------CCA1(1)                  --------->ZAT18  --------->ARR14(2)   <---------RVE1(1)       <----------DOF2            --------->RVE1(1)    --------->AHL20(1)                           -      <---------ANAC58      ----------->GT1            <---------ARR11(3)     --------->ANAC58     <-      <---------ANAC46   --------->ARR14(2)            --------->ARR11(3)     --------->ANAC58     <-      <---------ANAC58   <---------ARR14(2)            <---------AHL20(1)<----------ID1           <-- -------->ATHB12  <---------ZAT18 --------->CCA1(1)---------->DOF2<---------HSFB2a(2)    --------->MYB46(3)   aatgagtggctttaacttcgcgcgctggattcgaaaatatctgcttgaagattaaaagatattttcttccggaaacggacaagaaatgacaacgactcgt  1969600                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)                                                                         -------->ATHB1                                                                         <---------ICU4                                                                        <---------YAB1                                                                        --------->AHL20(2)                                                                        --------->ICU4                                                                        <---------AHL20(2)      ----- <------------CBF               --------->AHL20(1)                 --------->YAB1               ----- -------->ATHB12           ------------>CBF                       ----------->GT1<---------ANAC58  -- --------YAB1   ---------->ID1  <---------AHL20(1)           --------->YAB1<---------YAB1       <---- --------AHL20(2) <----------DOF2  <---------AHL20(2)       --------->AHL20(2)   <---------ANAC58<--- ---------TBP  <-----------GT1  <---------ARR11(3)   --------->GLK1(1)  --------->AHL20(1)     ------   ttttattggaaaacatttttcttttttggttcaatattttttttgtcaaaacgcgaactccattaaaaatgaaaattattaattcttgtgaaaacaaata  1969700                                                     <---------ANAC46          ----------->RAV1(2)                                                     <---------ANAC55(2)     ------->GAMYB                                                     <---------ANAC58       --------->MYB46(3)         <---------TOE1(3)                           <---------ANAC58       <---------MYB111(2)       ---------->DOF2                               ----------->GT1        <---------MYB55(2)     --------->REM1(2)                          --------->ATHB12    ------>MYB83--------->TOE2(2) ---->AHL20(1)                                  <---------ICU4      ------>MYB46(1)      <---------ANAC58 ---->AHL20(2)                                 <---------ATHB12   <---------MYB46(2)<---------MYB46(3) ------->GLK1(2)             --------->ZAT14   --------->ICU4     <---------MYB111(2)<-------GAMYB -----AHL20(1)              *TSS               <---------YAB1    --------->ANAC46 <---------LBD16 ------AHL20(2)          <---------AtLEC2  --------->At5g28300 <-----------GT1-------->P <---------ANAC58 --->YAB1<---------TOE2(3)<------------CBF----------->GT1 --------->ICU4    <---------MYB111(1)   taatctgtgtaaaggtaaatgcaagttgcattgcagactccgagcggtaatgatttcgtaaaaattcaccaaactccaacaacctgcggttgcgactcca  1969800                                                                 ----------------------->TaNAC69(2)                                                 <------ZmHOX2a(2)                                     --------->ZAT2    ------->GAMYB                                     --------->At4g35610     <---------ARR14(2)                                     <---------ZAT2   --------->MYB46(3)                                     <---------At4g35610     <---------GLK1(2)                                 ------>ZmHOX2a(1) --------->TOE1(2)                                 =======================HOX2a_HOX2a                                 ==================HOX2a_HOX2a--------->ARR14(2)                             --------->ARR11(3) <---------ARR14(2)            <------MYB46(1)                         ---------->DOF2        --------->ARR14(2)            <------MYB83                      --------->ANAC58          --------->AGP1<-----------ARR10                      --------->ANAC58         --------->At4g35610      <----------DOF2  --------->WOX13(1)  --------->ANAC46      <------ZmHOX2a(2)--------->ARR14(2)     <----------DOF2   aaatcaatctatcttcaaacacacacacaaagttcctgcagcttcgatcagatccaacgagccgattcttctctctttgtaggtctctttcttccattct  1969900                                                         <----------DOF2                                                    --------->DOF5.7(2)                            <-                                                    <---------MYB52(1)                   ============                                                   <-------GAMYB                         <------ZmHOX2a(2)                                                  <---------MYB46(3)                    --------->ARR14(2)                  --------->ARR14(2)              --------->MYB52(2)                    <---------ARR14(2)                  <---------ARR14(2)         --------->LBD16                   --------->ZAT18    <--                 <---------CCA1(2)         <---------ZAT18                     <---------ZAT18 <-----             <-----------GT1   <---------YAB1<------NtERF2                   --------->At4g35610  <--            <-----------GT1  <---------At4g35610 <-------TEIL         ------->TEIL    --------->LBD16       <---------YAB1       <---------YAB1 <---------LBD16    ------->TEIL   <---------At4g35610 ----   ggcgaaattttgattttccctatctgtattatgctgatttcatagtccgcgttcgttagctttgaatctatgaattttgagctcactcccgatccagatt  1970000        <---------GLK1(1)                                      <---------------AGL15        --------->GLK1(1)                                     <-----------------AGL2      <------ZmHOX2a(1)     <---------MYB52(1)                <-----------------AG  <---------ANAC46        <---------ANAC55(2)             <----------DOF2  <---------ANAC58        --------->ANAC55(2)             <---------DAG2  <---------ANAC58        <---------ANAC58        -------->ATHB1                                    < --------WOX13(1)         <---------ANAC58        <---------ICU4------>ZmHOX2a(1)     <---------ANAC58 ============HOX2a_HOX2a  <---------ANAC46        --------->ATHB12            <---------At4g35610 <-- -------ANAC58       <-----------RAV1(1) <---------At4g35610  ----------------->AGL1  <---------ANAC55(2) ----WOX13(1)        <---------MYB46(3)  --------->At4g35610  <-----------------AGL1  <---------ANAC58 -------ANAC58     <-------GAMYB<----------DOF2  <---------YAB1--------------->AGL15  ----------->GT1 ----->ATHB12 <----------DOF2   <---------DAG2  --------->GLK1(2)--------->ATHB12     <---------ANAC46   gattgcgaggagttctcttttcgttgttgcgttactttttttgagctcagaatcattgagcttttcctgatttggattacatctgatttcgtgaaactca  1970100                                    <---------DAG2                           <---------ANAC55(1)            <---------ANAC55(1)                           --------->ANAC55(2)            <---------ANAC46                           <---------ANAC46               --------->ANAC55(2)                           <---------ANAC58               <---------ANAC58               ---------->DOF2                           <---------ANAC58               <---------ANAC58       ------>NtERF2                           <---------ANAC55(2)            <---------ANAC55(2)   --------->RAP2.6(2)                         <-----------GT1   <---------TOE1(2)                  <---------At4g35610              ----------------------->TaNAC69(2)         ----------->STF1     --------->At4g35610             --------->GLK1(1)     <---------ANAC58    ----------->TGA1    ---------->DOF2 -------TEIL <---------GLK1(1)     <---------ANAC58  --------->YAB1      <---------HSFB2a(2) -------GLK1(2)      <----------DOF2<----------DOF2 <---------ATHB12     --------->HSFB2a(2)   gattcattcgaatagatttccttctttttacgtgtttgctttttctaggttccaatagtgacgtattaatctcttcttgaagcggccctgttaaagaatg  1970200  Previous    Next  AGI:  At1g06460.1    Description:  ACD32.1 (ALPHA-CRYSTALLIN DOMAIN 31.2). similar to AT-HSP17.6A (Arabidopsis thaliana heat shock protein 17.6A) [Arabidopsis thaliana] (TAIR:AT5G12030.1); similar to peroxisomal small heat shock protein ACD31.2 [Brassica rapa] (GB:ABV89635.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain Heat shock protein Hsp20 (InterPro:IPR002068) Range:  from: 1967086    to: 1969560    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g06470.1    Description:  phosphate translocator-related. similar to phosphate translocator-related [Arabidopsis thaliana] (TAIR:AT5G25400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69936.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 1969728    to: 1973766    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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