Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------ZAT14                                              ------>MYB46(1)                       --------->ZAT18                                              ------>MYB83                       --------->ZAT14                                            --------->AtMYB61               --------->RAP2.6(2)                                                ------->GAMYB<-----       --------->At4g35610            --------->ANAC58                            <---------MYB59   --------->ANAC58 --------->At4g35610       <---------ANAC46                  --------->ANAC58   --------->ANAC58 <---------At4g35610       <---------ANAC58                --------->MYB46(3) -->HSFB2a(2)<---------At4g35610      --------->ANAC58                  ---------->DOF2        ------ -->LBD16 ---------->DOF2  --------->DEAR3(1) <---------ANAC58    --------->YAB1--------->ANAC58  <-- ---HSFB2a(2)--------->At4g35610      --------->ANAC46          --------->GLK1(2)--------->MYB46(3)   aagacaagccgatgaagcagccatctgcacagacgattacaagccatggcgtgaacaaaaaaaaacaatctgaacaaagaacaaccaaacaaaacgagac  1962600                                                       --------->ANAC58                                                       --------->ANAC58                                              <---------ICU4                     <--------P               <--------HAHB4                  --------->HSFB2a(2)         --------->ATHB12        --------->AtLEC2      --------->YAB1  --------->YAB1        --------->ANAC58     <---------YAB1  --------->ICU4        --------->ANAC58--------->ZAT6       <---------YAB1                                         < ----ARR11(3)     <---------HSFB2a(2)        <---------ATHB12                                       - --->ARR11(3)    <---------ANAC46            <------ZmHOX2a(2)       --------->ATHB12              <- --------DOF2  --------->GLK1(2) --------->YAB1        <---------ANAC46                            --   ctttaacaacatgcaagtttctggtaagactataatcaacataagcgatcattagcgacgcatatgaagaaagattggaacattttcatgctccaagata  1962700                                                                 <---------YAB1                                                               --------->ATHB12                                                               --------->ATHB51                                                               <---------ICU4                                                              <---------YAB1                                                              --------->ICU4                                                            --------------->AGL15                                                           ----------------->AGL2               <<<<<<<<<<<<<<<<<LFY                    <<<<<<<<<GATA-1       --------->HSFB2a(2)                             <<<<<<<<<GATA-3       <---------HSFB2a(2)                             <<<<<<<<<GATA-4 ---------AHL20(2)                                     <<<<<<<<<GATA-2 -------->AHL20(2)            --------->TOE2(3)       --------->ARR14(2) --------AHL20(2)          <-----------GT1            ------->TEIL          ------>ZmHOX2a(1) ------->AHL20(2)       --------->CCA1(2)      <---------ALFIN1<--------HAHB4---------->DOF2   aaaaaatttgtagaaattgccactggatataacattagtctatatttcaacacatgaatccaccattattagacattcctaaagtcaaattaagaagaaa  1962800                                                --------->AtLEC2                                                --------->ANAC58                                                --------->ANAC58                                              --------->YAB1                                            --------->GLK1(2)      --------->GLK1(1)           <-----                                           --------->YAB1         <---------ARR11(3)          -------                                     ----------->GT1   --------->ANAC58              --------->YAB1     <----------ID1              <---------TOE2(2)     --------->ANAC58             <---------YAB1   ---------->DOF2              <-----------RAV1(2)  --------->MYB46(3)       --------->ICU4  <------   acagataaagacaaatagacttgctgaacaaaacccaggtagtaagaatcatgcaacaagcagaccgagatttcatagaaatttttatcatcaaaagatt  1962900                                                                 ----------->RAV1(2)                                                                 --------->ZAT2                                                             --------->ANAC58           <---------MYB59                                   --------->ANAC58           --------->AtMYB61               <---------At4g35610   <---------ZAT2 ----GLK1(1)    ---------->DOF2            --------->At4g35610  ------->TEIL              ---------->DOF2 -->ARR11(3) ------>MYB46(1) <---------ANAC58   --------->At4g35610              <---------At4g35610 ---ARR11(3) ------>MYB83    <---------ANAC58   <---------At4g35610              --------->At4g35610   tcagaaattcagaccaaacaaagcagaaaatgcttgagattacacagatgagctaagagtgaaacgcacctgtggaatttggcagaagaagagaaagaga  1963000                                                                            <----------DOF2                                                                       <---------ANAC58                                                                  <---------ANAC58                                                                  <---------O2                                                                  =====================bZIP_DOF                                                                  --------->O2                                                                  --------->TGA1a                                                                  <---------ANAC55(2)                                                             <---------At4g35610                                                      <------NtERF2    <---------ANAC58                                                    <---------PCF2<---------bZIP60(2)                          <------MYB46(1)        --------->ALFIN1 <---------ANAC55(1)                          <------MYB83         --------->ALFIN1   --------->ANAC55(2)                         --------->MYB111(1)   <-----------RAV1(1)<---------TGA1a                         --------->MYB46(2)    <---------REM1(1)  <---------ANAC58            --------->ANAC58   =============================================bZIP_DOF            --------->ANAC58   <----------DOF2 <---------O2  --------->At4g35610          *TSS           --------->MYB59       <---------bZIP60(2)<---------ANAC46         <---------   ttgtttgtttggagaagcaaatgaagtttggtacttttgaagacaagagatgtggctccgaacagcttacgtggcttcctttcatgggctctcggttttt  1963100               <-----------GT1          <---------ANAC58                                                                   <-------          <---------ANAC58                 --------->LBD16                        --------->DOF5.7(2)       <---------CCA1(2)      <-----------GT1                                    --------->TOE1(3)     <---------ICU4           --------->YAB1           --------->WOX13(1)      <---------TOE2(3)    <---------ATHB12       --------->HSFB2a(2)       ------>MYB46(1)   <---------ANAC55(2)<---------ICU4 <-----------GT1     --------->AHL20(2)<-----------GT1--------->MYB46(3)      --------->MYB52(1) ---------------ANAC81     <---------HSFB2a(2)       ------>MYB83--------->AHL20(2)<-------TEIL   ---   atttcactcatttcttgtcacaattttttctataaccattttttccacaaaaaccatccatcaaaaattcaatacataaataacgttcacaatttttaca  1963200                                                                            --------->YAB1                                                                            --------->AHL20(2)      <---------AHL20(2)                                                  --------->AHL20(2)     ----      --------->AHL20(2)                                                  --------->AHL20(1)   <-----  --------->AHL20(2)                        <---------TOE2(3)            --------->YAB1 --------->AHL20(1)  <---------YAB1                      <---------TOE2(3)       --------->AHL20(2)        --------->AHL20(2)  <---------AHL20(2)                ---------->DOF2           <---------AHL20(2)        <---------AHL20(2) ----GT1      <---------YAB1    <---------ZAT6  ---------->DOF2        --------->AHL20(2)    <------- ------>AHL20(2)   <---------AHL20(2) <---------TOE1(3)      --------->AHL20(2)        --------->AHL20(2)   ttatataattaaacttataatttaaaccctggtagtgataaaggttaagaaaaagaattcaaattttattccaaaaaataatatttcaaaaaaattagga  1963300                                                                              --------->ANAC46                                                                              --------->AtLEC2                                                                              ------>MYB83                                                               --------->ANAC58         ---------->DOF2                                                               --------->ANAC58 --------->YAB1                                                             ---------->DOF2  --------->ANAC58                                                          --------->O2        --------->ANAC58                                                        ----------->RAV1(1)   ------>MYB46(1)                                                     --------->ANAC58       ------->GAMYB           -   ----------->GT1                                   --------->ANAC58      --------->MYB46(3)       < ---------->DOF2                                    --------->GLK1(1)     --------->ANAC58         <- ------->GT1                                       ---------->DOF2        --------->ANAC58  --------- -ZmHOX2a(1)            ---------->DOF2           <------ZmHOX2a(1)       -------->P--------->GLK1(2) --TOE2(3)    <----------ID1                    <---------TOE2(3) --------->WOX13(1)<---------ARR11(3)   tgtaaaagtaaaaaatagaacaagaacaaagatgagagttttagtagaataaggaaagccacatgaagcaattagcaaccaagcaaaatctaaagaaaga  1963400                                                               --------->ANAC46                                                             --------->ANAC46                                                             --------->ANAC58                                                             --------->ANAC58                                                            --------->ZAT18                                                            --------->ZAT14                                                            <---------ZAT18                                                            <---------ZAT14 --------->ARR14(2)                                                            <-------TEIL    --------->ZAT14   <------                                                        <---------------AtSPL8           <---------MYB46(3) -------->ANAC55(2)                  <---------ETT(2)   --------->DAG2     --------->DOF5.7(2)<------ ---------ANAC55(2)           <----------DOF2--------->ANAC55(2)   ---------->DOF2 ------>ZmHOX2a(1) ----------------------TaNAC69(2)    --------->ETT(2)  ---------->DOF2     <---------MYB52(1) <------ ->DOF2                   <-----------GT1    <---------ANAC55(2)----------->RAV1(1)==================   agacgtattgagtttggatactagtttctaacctttctgtcgacaatacataaccaaaaaagtacacaacaaagaccgtttactcctacattggtttcgt  1963500  Previous    Next  AGI:  At1g06430.1    Description:  FTSH8 (FtsH protease 8); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding. similar to VAR2 (VARIEGATED 2), ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G30950.1); similar to ATFTSH6/FTSH6 (FtsH protease 6), ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G15250.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69920.1); similar to FtsH-like protein Pftf precursor [Nicotiana tabacum] (GB:AAD17230.1); contains InterPro domain AAA AT Range:  from: 1960057    to: 1963010    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g06440.1    Description:  similar to RPD1 (ROOT PRIMORDIUM DEFECTIVE 1) [Arabidopsis thaliana] (TAIR:AT4G33495.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78615.1); contains InterPro domain Protein of unknown function DUF860, plant (InterPro:IPR008578) Range:  from: 1963379    to: 1965050    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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