Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ------>MYB83                                                      ------>MYB46(1)                                            ----------->RAV1(2)                                  ---------->DOF2    ----------->RAV1(1)<---------------AtSPL3                                <---------HSFB2a(2)--------->MYB46(3)  <---------ANAC58                           <----------TaMYB80  <-----------HVH21  --------->MYB52(1)         <-------                          --------->ARR11(3)=====================RAV   <---------ANAC58   --------->ARR14(2)     <---------ANAC46    --------->YAB1 <-----------GT1 ---------->DOF2<---------ANAC46   <---------ARR14(2)   cactgtctcttggacgatgcttcacagtgatattccaaaagtttacccctgtcaccaacaaagccaaataagggcttgtaccgattgaagagtatatgat  1899600                                               ------->GAMYB                                              --------->MYB46(3)                                            <-----------GT1                                         <---------ICU4                                         --------->YAB1                                    --------->TOE2(3)                                        <---------YAB1                                     >>>>>>>>>RAP2.2                                      <---------ICU4                              <---------ZAT2                                      <--------HAHB4                              --------->At4g35610       <---------ZAT14                --------->YAB1                              <---------At4g35610       <---------ZAT18               <---------ATHB12                             --------->ZAT2     --------->ANAC46                --------->ICU4              --------->ARR11(3)     --------->WOX13(1)   --------->ZAT6---------->DOF2     <---------YAB1              <---------ARR11(3) <----------DOF2 --YAB1--------->ZAT14          --------->ANAC55(2)      <---------YAB1          <---------TOE1(2)  -   acttcccactacacttgagtaaagaactgtcttcatgtaatcattataaccatcttgttatgcttactatcttcttcaaatcgcagctttcaatctaaaa  1899700                                                       <----------DOF2                                                    <---------ARR11(3)                          -----                                             --------->ANAC58                                   <----         ----------->HVH21                   --------->ANAC58                             --------->YAB1     ------>ZmHOX2a(1)                       --------->ANAC46   <----------DOF2   <---------ZAT14   < ------>TEIL --------->TOE1(2)    --------->MYB46(3)--------->ARR11(3)            --------->ZAT14 ---   tgaactcctaagtgacatacgactaattttgcttcatccatcgcaaaacgcaaacatcttttaaaacttttactgaattttttctgcagtaaacatagtg  1899800                                                                                  --------->ARR14(2)        <---------ANAC58                                           --------->DEAR3(2)        <---------ANAC58                                           --------->MYB46(3)    <----------DOF2                  --------------->AGL15 --------->ATHB12<---------ATHB12  --------->LBD16                    <---------------AGL15--------->AHL20(2)      <---------ARR14(2) ---->ZAT14                         <-----------------AGL1<---------AHL20(2)     <---------GLK1(1) -----ZAT18                         <-----------------AGL2<---------YAB1--------->MYB46(3) ---------LBD16                   <-----------GT1  ----------->HVH21<---------ETT(1)       ---------- ---->TEIL                     --------->AHL20(2) <---------WOX13(1)----------->HVH21 <---------ALFIN1   aacccggtttacgttctggtttagacgtttcaattttttctaaattgggccgattgacatataattggacccgacccatcaacatatcccacatcgttac  1899900                                     ------>MYB46(1)                                     ------>MYB83                                  --------->DEAR3(2)                             <---------AHL20(1)                             <---------ARR11(3)                         --------->YAB1                         <---------ICU4                     --------->AHL20(2)                                             --------->TOE2(3)                     <---------AHL20(2)                                       --------->TOE1(3)                    <---------AHL20(2)                         *TSS           --------->TOE2(3)                    --------->AHL20(2)                  <---------ANAC46      <---------MYB59                <---------YAB1  <-----------GT1      ----------->HVH21  --------->YAB1             <---------YAB1 ----------->TBP         --------->SPL7     <---------ATHB12 ->GT1------------>CBF  <---------ATHB12          <-----------HVH21  --------->WOX13(1)     <--------   aaatagatttcaattactataatttaatcaatatataccgactaaaactctctgtccgacgtagagtcttccaatcaaaacctaaatctaaatttttcat  1900000                                                      --------->ANAC58        --------->DEAR3(1)   --                 ------->GAMYB <---------MYB52(2)     --------->ANAC58        --------->ANAC58     --        --------->LBD16       <------NtERF2        -------->P                 <---------ALFIN1    ---        ------>NtERF2        ------>NtERF2   ------>NtERF2                    --------->ANAC58    <--      <---------LBD16       <----------ID1  <---------ANAC58        --------->STY1(2)            ---- ---GT1<---------ANAC46     <---------ETT(2)<---------ANAC58    ------>ZmHOX2a(1)                <---   tcccttgttccggcgataacagtctcagtggcgacaaaccctattgccgagccaactcgcattttcctctagctatcgcaacgcctctcgctctctctcc  1900100           --------->At4g35610           <---------At4g35610     <-------TEIL    --------->ARR14(2)    <---------ARR14(2)   <---------MYB52(1) ---->NtERF2                     <---------At4g35610 ------->MYB52(1)                <---------ZAT2                  --------->ANAC46 ------>ANAC46           <----------DOF2           <---------TOE2(2) -------ALFIN1      ------>ZmHOX2a(1)              <---------TOE1(2) ----->MYB46(3)    --------->TOE2(3)              <---------STY1(1) ------MYB55(2)    --------->TOE1(3)              --------->STY1(1)                            ------   ccaccggttcgtcttctcactccttaactttgttcagcttgttgattctaccctaggttattgctctactccaacgcttctgctcgactctcgccttgtt  1900200                                                                                  <--------P                                             <---------TOE1(2)              --------->GLK1(2)     <--                                            ------>ZmHOX2a(1)        --------->TOE1(3)       <-------    <----------DOF2                         --------->STY1(1)        --------->TOE2(3)       <------- ---->ID1          --------->YAB1  <---------GLK1(2)              <-----------GT1 <---------WOX13(1)   gtttttctttagtccaacttagcataagcttctgctcgattctctcctagggttttgctctagtctaattaccttaagtttctggttgattctagctttt  1900300                                                                          <---------GLK1(2)                                                                  <-----------RAV1(1)                                                     ----------->GT1      --------->ARR14(2)                                             <<<<<<<<<<<<<<<<<LFY--------->ARR11(3)                                            --------->ANAC58--------->AHL20(1)          <---------MYB52(2) -------AtLEC2                              --------->ANAC58--------->AHL20(2)     ----------->GT1 --DAG2                                     --------->ANAC46<---------AHL20(2)     --------->YAB1 ---DOF2                           <------ZmHOX2a(1)----------->GT1       <---------ARR14(2)   tcatggtgttctcttggacttggtgttgagcattagaggagattactcgccaatgggttaaataaaatatgttgcagaattgctatagtaaataacccag  1900400                                                                                 <---------WOX13(1)         ---------->DOF2                                                       --------->ATHB12       --------->YAB1                                                         <---------YAB1    --------->WOX13(1)                     <----------DOF2                    ------>ZmHOX2a(1)   ------>ZmHOX2a(2)                       <---------DAG2                 <---------ARR14(2)  <------ZmHOX2a(2)                     <-----------GT1        <---------At4g35610 <---------ARR11(3)               <---------ATHB12   <---------MYB52(1)   --------->ARR14(2) --------->ARR11(3)           --------->ZAT18       <---------RAP2.6(3)   <---------ARR11(3)    <---- --------->AGP1               <---------ZAT18       <-------GAMYB         --------->ARR11(3) -------- <---------AGP1               --------->ZAT14     ---------->ID1  --------->At4g35610       <--------   atagatctatcaaaagcttgattttgtggtaatgcactcatttgacttttttgccgttattgtttatctgctacaaaatcctgattgctcatgggattct  1900500  Previous    Next  AGI:  At1g06220.1    Description:  MEE5 (maternal effect embryo arrest 5); translation elongation factor/ translation factor, nucleic acid binding. similar to elongation factor Tu family protein [Arabidopsis thaliana] (TAIR:AT5G25230.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ58134.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ65473.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81413.1); contains InterPro domain Translation elongation factor EFG/EF2, C-terminal; (InterPro:IPR000640); contains InterPro domain Translation elongation factor EFG/EF2, domain IV; (InterPro:IPR005517); contains InterPro Range:  from: 1899963    to: 1904872    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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