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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
-------->
ATHB1
<---------
ICU4
--------->
ATHB12
--------->
ATHB51
<--------
ATHB1
<---------
YAB1
<---------
ATHB12
<-------
TEIL
-
<---------
ANAC55(2)
--------->
ICU4
<--
----------->
GT1
<---------
DEAR3(2)
--------------->
AtSPL8
--------->
YAB1
-------
--
ARR11(3)
--------->
ATHB12
--------->
ANAC55(2)
<---------
ATHB51
<-----------
GT1
tagccagttaaatcgaagcattggggtcgattcaaaaaacgtattccaatactaggtacaattcaattattgactctcataagttgtttttttgcaatat
1864400
--------->
ALFIN1
<------
MYB46(1)
--------->
ARR11(3)
--------->
ANAC58
<------
MYB83
--------->
MYB46(3)
<------
ZmHOX2a(1)
--------->
ANAC55(2)
--------->
At4g35610
<---------
ARR14(2)
<---------
TOE2(3)
--------->
ANAC46
<---------
At4g35610
--------->
MYB52(1)
--------->
ANAC58
<---------
ANAC55(2)
<---------
DEAR3(1)
--------->
ZAT6
--------->
ARR14(2)
--------->
ANAC58
--------->
ANAC58
--------->
ARR14(2)
--------->
ANAC58
--------->
LBD16
--------->
At4g35610
<----
---------->
TGA1
<---------
ARR14(2)
--------->
ANAC58
<---------
LBD16
--------->
ANAC58
<----
-------
ICU4
<---------
ARR14(2)
----------->
HVH21
---------->
DOF2
--------->
ANAC58
<------
-->
ICU4
--------->
ARR14(2)
<------
ZmHOX2a(1)
---------->
DOF2
--------->
YAB1
--------
ttatgacgcaattcatattcgaatttgggaggtgaggatgacacgataacaccaaaaaaccggaaccactaagcataagctaaggaacttggaaatggtc
1864500
--------->
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ATHB51
--------->
DAG2
<---------------
AGL15
--------------->
AGL15
<-----------------
AGL1
-----
WRKY38(1)
--------->
ICU4
-----
WRKY12
----------->
GT1
<------------
CBF
------->
GAMYB
-----
HVH21
----------->
GT1
------------>
CBF
---------->
DOF2
--->
GT1
---------->
DOF2
--------->
AHL20(2)
<----------
DOF2
--------->
ANAC46
<<
aaatgtctcaaaaagggaaataatttttaaaaaaaatcaattggcaagtttgattcagtctttaactcttaaaagtctcaacgaaatagaaactgaagac
1864600
<------
MYB46(1)
<------
MYB83
<-------
MYC2
--------->
MYB111(2)
--------->
MYB46(2)
--------->
MYB59
<-
--------->
MYB111(1)
---
<---------
MYB46(3)
<-------
TEIL
<--
<---------
MYB55(1)
<-----------
GT1
<--
<--------
P
<-------
MYC3
--------->
ZAT6
<------------
CBF
---
<---------
MYB46(3)
<---------
ANAC46
<-----------
GT1
<---------
ANAC58
---------->
DOF2
--------->
ZAT6
------->
MYC3
<---------
YAB1
<---------
ANAC58
--------->
AHL20(2)
<<<<<<<<<<<<<<<
LFY
------->
MYC2
--------->
ICU4
--------->
GLK1(2)
<----------
ID1
-------
ataacactggttggtacttgagcatgtgtgtatatacattattaacactaaaacttcacagaaattcttgctaaactcattgtgacaaataaagacataa
1864700
<---------
ANAC58
--------->
ALFIN1
<---------
ANAC46
<-----------
RAV1(1)
<---------
ANAC58
<---------
ANAC58
<------------
CBF
--------->
ATHB12
------>
NtERF2
<---------
AHL20(2)
<---
<---------
AHL20(2)
----------->
GT1
<------
--------->
AHL20(1)
--------->
LBD16
<------
<---------
AHL20(1)
<------
NtERF2
--------
--------->
AHL20(2)
<---------
ANAC46
<-------
--------->
ANAC58
--------->
AHL20(2)
<---------
LBD16
<------
NtERF2
--------->
ANAC58
<---------
AHL20(2)
<---------
ANAC58
<------------
--------
AHL20(2)
<---------
AHL20(1)
<---------
ANAC58
<---------
RAP2.6(3)
------>
AHL20(2)
<---------
AHL20(2)
<---------
DEAR3(1)
<---------
DAG2
<-------
-------
AHL20(2)
--------->
AHL20(2)
--------->
ALFIN1
<----------
DOF2
--------
-------
AHL20(1)
<---------
ANAC58
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC46
------>
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
ANAC46
<-----------
GT1
------>
NtERF2
-->
ICU4
--------->
ANAC46
<---------
ANAC58
<---------
ANAC46
--------->
TOE2(3)
<-----------
GT1
--
tttaatatttcaagccatttttttttttgcttaaattaaatttattgacttgtgtggcgcgggtaacataaatttgactttttttttgccgtcg
atgctt
1864800
--------->
ZAT14
<---------
ZAT14
------
LBD16
---
ANAC58
---
ANAC58
XXXXXXXXXXXXXXXXXXXX>
MIR2939
->
HSFC1(2)
--------->
ANAC58
--
HSFB2a(1)
------>
ZmHOX2a(1)
--------->
ICU4
---------
WRI1
----------->
RAV1(2)
--------->
ANAC46
<---------
ARR11(3)
--
HSFC1(2)
--------->
MYB46(3)
--------->
ZAT6
--------->
ANAC58
->
HSFB2a(1)
<-----------
GT1
--------->
ANAC46
--------->
ANAC46
---------
------->
LBD16
<----------
DOF2
--------->
ANAC58
--------->
ANAC58
<--------
ccggtgaacagagccagagctcttttaacaatcctgagccaagccaaaacactaaaccatactcagcaagttcacgccaaggtcataatccatggattcg
1864900
--------->
MYB52(1)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ARR14(2)
<---------
HSFB2a(2)
<-----------
GT1
--------->
ARR14(2)
>
ARR14(2)
--------->
HSFB2a(2)
<---------
CCA1(2)
<---------
ARR14(2)
-
ARR14(2)
<---------
LBD16
<---------
MYB52(2)
<---------
ARR14(2)
<----------
DOF2
<
aagatgaagttgttctcggatccagtctcactaacgcttatatccaatcgaatcgtctcgatttcgctacttcttctttcaatcgaatcccttgttggaa
1865000
<----------
DOF2
--------->
ANAC55(2)
<---------
ANAC46
<---------
ANAC58
======================
bZIP_DOF
<---------
bZIP60(1)
--------->
TGA2(1)
<---------
TGA2(1)
--------->
bZIP60(1)
<---------
TGA1a
--------->
TGA1a
<---------
ANAC58
--------->
O2
<---------
LBD16
<---------
O2
<---------
ANAC46
<---------
bZIP60(2)
<---------
ANAC58
----------->
STF1
<---------
ANAC58
<---------
YAB1
<---------
ANAC58
<---------
ARR14(2)
--------->
GLK1(2)
---------->
ID1
<---------
ANAC58
--------->
ARR14(2)
<---------
GLK1(2)
<---------
ARR14(2)
<---------
TGA2(2)
------
ZmHOX2a(1)
--------->
ARR14(2)
--------->
ARR14(2)
----------->
TGA1
gaggaatcgccattcgtggaacacgattctctctggttactccaaatccaagacttgttgttatagtgacgtcttgcttctttacaatcgcatgagaagg
1865100
<---------
ANAC58
<------
MYB83
<---------
ANAC46
<---------
MYB46(3)
<---------
YAB1
<------
MYB46(1)
<---------
GLK1(1)
<---------
AtMYB61
--------->
ARR14(2)
<-------
GAMYB
<-----------
RAV1(1)
<---------
ARR14(2)
<---------
ANAC46
<------
ZmHOX2a(2)
<---------
GLK1(2)
<---------
ANAC58
<------
MYB83
---------->
DOF2
--------->
HSFB2a(2)
<---------
ANAC58
<---------
ANAC58
<------
MYB46(1)
<---------
ANAC58
<---------
HSFB2a(2)
<-------
TEIL
<---------
YAB1
--------->
MYB59
<---------
ANAC58
<----------
DOF2
--------->
GLK1(2)
cattgtgatggcgttgatagtttcaatttggtatttgcgatcaaagcttgtgttggtttagggcttttagaaaatgggattctgattcatggcttggcta
1865200
<-------
GAMYB
--------->
MYB52(2)
<---------
MYB46(3)
<------
MYB83
--------->
MYB55(2)
<------
MYB46(1)
<---------
TOE2(2)
--------->
ATHB12
<---------
AtMYB61
<---------
ICU4
<---------
TOE1(2)
--------->
DAG2
--------->
ICU4
<---------
MYB52(1)
--------->
At4g35610
<------
ZmHOX2a(1)
<-------
GAMYB
--------->
ZAT14
--------->
YAB1
<---------
MYB46(3)
<------
MYB83
<---------
ZAT14
<---------
TOE2(3)
--------->
LBD16
<------
MYB46(1)
<---------
ZAT18
<------
MYB83
<---------
ANAC55(2)
--------->
MYB111(1)
---------->
DOF2
<------
MYB46(1)
<---------
ANAC58
<---------
ANAC58
--------->
MYB46(2)
--------->
ZAT18
<--------
P
<---------
YAB1
<-----------
HVH21
------->
TEIL
---------->
DOF2
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
--------->
MYB59
--------->
ZAT18
-------
tgaagaatgggttggataaggatgattacgttgctccgtcgttggttgagatgtatgcacaattaggtactatggaaagtgcgcagaaagtgttcgacga
1865300
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AGI:
At1g06140.1
Description:
pentatricopeptide (PPR) repeat-containing protein. similar to EMB2758 (EMBRYO DEFECTIVE 2758) [Arabidopsis thaliana] (TAIR:AT4G33990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43513.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885)
Range:
from: 1864795
to: 1866471
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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