Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ANAC58                           --------->ANAC58                <---------ANAC55(2)                <---------ANAC58                <---------ANAC58                                           <--------P                --------->ANAC55(2)                                       <---------MYB52(1)     --------->ARR11(3)    --------->ANAC46                          --------->ARR14(2)     ---------     <---------ARR11(3)   --------->SPL7            <----------ID1   <---------ARR14(2)    <---------YAB1 --------ANAC55(2)      <---------SPL7    --------->ARR14(2)     --------->At5g28300     --------->YAB1 ------->ANAC55(2)   --------->At4g35610  <---------GLK1(2)   <---------At5g28300        <------ZmHOX2a(1) ------YAB1     <---------ANAC46          <---------ARR14(2)----------->HVH21          <---------TOE1(3) -->GT1    --------->YAB1<---------MYB52(1)       ---------->DOF2--------->LBD16       <---------TOE2(3)   tacttgatatctacaataacgtgagccgtaagcaactcaactcagatacttataaagacgaactcaccgtgaatcgggtaagtcttgttaaggatgataa  1749300                                                                                                    <                                                      --------->AtMYB61                            --                                                     --------->ANAC46 <----------DOF2             <--    ------>NtERF2                                  <-----------GT1    ------>ZmHOX2a(1)       <------ ------>NtERF2                                <---------YAB1  --------->YAB1             --------->At5g28300 >YAB1     ---------->DOF2             <---------ALFIN1 --------->ANAC46  <---------AHL20(2)  <------   ctctgcctccaaacaaagctctggtttctcttgttgttcttccacttgatgatataccacaccaaaataatccttttttatttctcacaactgtaacttt  1749400                                                                          <---------AHL20(2)                                                                 <------MYB83                                                                 <------MYB46(1)                                                                --------->MYB59        <---------YAB1                                                            --------->AHL20(2)         <---------AHL20(2)   <---------AHL20(2)                                       <---------AHL20(2)         <-------------   --------->AHL20(2)                                      <---------AHL20(1)         <-------------- ---------AHL20(2)                                         <---------AHL20(2)        --------->YAB1 ------->AHL20(2)                                          --------->AHL20(2)     <----------DOF2 -------YAB1                                          --------->At5g28300--------->AHL20(2) ---DAG2             <----------DOF2         <-------TEIL  --------->AHL20(1) <-----------GT1      <- ----DOF2    ---------->ID1          ---------->DOF2 ----------->GT1   --------->TOE2(3)   <---------ICU4   attatataaatttttgtttttttctttgactcatggaagaaaagaaattcatgaactgtaatttatttggtcacattaattttccttttataattttggc  1749500                                                                   <---------MYB46(3)                                                                   <------MYB83                                                                   <------MYB46(1)            =================================HOX2a_HOX2a          <---------AtMYB61            ------>ZmHOX2a(2)                                    <--------P           ==================================HOX2a_HOX2a        <---------ANAC58           <------ZmHOX2a(2)                                    <---------ANAC58          <---------ARR11(3)                                   <------MYB83          --------->AGP1                                       <---------MYB46(3)      <---------ICU4          --------->ARR11(3)                                   --------->ATHB12        --------->ATHB51          <-----------ARR10                                    <------MYB46(1)         --------->ATHB12      ---------->DOF2                       ---------->DOF2    --------->MYB55(2)     <---------YAB1    --------->YAB1                        <---------AHL20(2) <---------WOX13(1)       --------->ICU4 --AGL15  <---------AGP1              ------>ZmHOX2a(1)    --------->ATHB12        ---------->ID1 ---AGL1 --------->RVE1(1)         <-----------GT1        <---------AHL20(2)       <---------YAB1---- --------ATHB12                   <-----------GT1         <---------YAB1     <---------YAB1     -----   aaacattcaaaagatctattcattctacttgggttatttcctattttaaagaaactaaatttgattggttggttttgtgatttttgtcattatttgggaa  1749600                --------------->AGL15                <---------------AGL15               <-----------------AG               ----------------->AGL1                                                             <--               ----------------->AG                                                          --------               ----------------->AGL2            <---------At5g28300                         <-------          --------->AHL20(2)                <----------DOF2                    ------->TEIL <--------    ----------->GT1              ---------->DOF2<-----------GT1              ------->GAMYB --------->YAB1   ----------->GT1         ----------->GT1 <---------ANAC58                 --------->MYB46(3) ------ ----->DAG2    <-----------------AGL2      <---------ANAC58                 <---------MYB52(2)------- ----->DOF2    ----------------->AGL3 --------->CCA1(2)          <----------DOF2 *TSS------->TEIL<---   aagcgagggaaaataaatccaaataggggaagaaaaaaagagatggcttttcaccgagttttctctgcttttgtaacaacgaacatgaaccaagaataat  1749700                                                                                                  <--                                                                                                 <---   <----------DOF2                                                                              -----  <------------------------ANAC81                                                               <---- --------DOF2                                                                             <---------ANAC58 ->KAN4(1)                                                                    <-----------GT1  ------ --KAN4(1)           --------->PCF2                                         <----------DOF2    ------ -KAN4(2)<----------DOF2                                            <------NtERF2         <---------ANAC58 --->GLK1(2)         ---------->ID1                                ------>NtERF2 --------->TOE2(2)<-- -->YAB1 <---------DAG2                                           <---------DEAR3(1)  <---------MYB52(1) ------ICU4       --------------->AtSPL8<-----------GT1           --------->ALFIN1    --------->DOF5.7(2)   cttttctttccctttttttgtttgtcccacaattcttcaaattttcttctctctatctaattctcacggtggcgatgtctttacctccgtttacttgccg  1749800                --------->ATERF1(1)                <------NtERF2                <---------At4g35610                --------->At4g35610               <---------RAP2.3(1)               <---------DEAR3(2)               <---------ERF1               ------>NtERF2               <---------ATERF1(1)              <---------RAP2.3(2)              --------->DEAR3(1)              <---------RAP2.6(2)              <---------DEAR3(1)             --------->DEAR4(2)             --------->DREB2C(1)             <------NtERF2             --------->RAP2.3(1)             <---------At4g35610            <---------ERF1            <---------RRTF1(1)            <---------DEAR4(2)            <---------RAP2.3(1)            <---------ORA47(2)            ------>NtERF2            <---------RAP2.6(1)           --------->ATERF1(2)           <---------RAP2.3(2)           <---------DEAR3(1)           --------->DEAR3(1)           <---------RAP2.6(2)           <---------ATERF1(2)           <---------RAP2.3(3)           --------->ALFIN1           <---------RRTF1(2)           <---------RRTF1(3)           <---------ANAC46          --------->RAP2.3(1)          <---------ABI4(1)          <---------At4g35610          --------->ATERF1(1)          <------NtERF2          --------->At4g35610          --------->DEAR4(2)         <---------ORA47(2)         <---------RAP2.3(1)         <---------RRTF1(1)         <---------DEAR4(2)         <---------ERF1         <---------ATERF1(1)         <---------RAP2.6(1)        <---------RAP2.3(2)        <---------RRTF1(2)        --------->ALFIN1        <---------RRTF1(3)        <---------RAP2.6(2)        --------->ATERF1(2)        <---------ANAC46        <---------DEAR3(1)        --------->DEAR3(1)        <---------ATERF1(2)        <---------RAP2.3(3)       <---------ABI4(1)       --------->RAP2.3(1)                       --------->ZAT2       ------>NtERF2                             <---------ZAT2       --------->ATERF1(1)                       --------->At4g35610       <------NtERF2                      <---------ANAC58      <---------RAP2.3(1)                 <---------ANAC58      <---------ATERF1(1)               --------->ALFIN1           <---------At5g28300     <---------DEAR3(1)             --------->At4g35610   ---------->DOF2    <---------LBD16         <---------MYB52(1)   <---------At4g35610  --------->At4g35610 --------DOF2<---------DREB2C(1)    --------->ZAT2      --------->ANAC58 ---NtERF2--------->DREB2C(1)  <------MYB46(1) <------NtERF2  <---------ARR11(3) ->NtERF2------>NtERF2    ----------->HVH21  <---------DEAR3(1)   <-----------GT1 -----RAP2.6(3)<---------RRTF1(1)   <---------At4g35610 --------->ANAC58 --->RAP2.6(2)<---------RAP2.3(3)   <---------ZAT14     --------->ANAC46               <--------P  -- --->DEAR3(1)--------->ATERF1(1)    <---------ZAT2 ----------->HVH21  <---------At4g35610       <---- -------DAG2<---------ATERF1(1)<------MYB83<-----------HVH21  --------->ARR11(3)    ------>ZmHOX2a(1)   ccttctcgcggcggcggcggctctctatctgataggtctgctgtgcgtcggagctgacacgaaagatgttaccgctcccaaaattcctggttgctccaat  1749900                                                <---------AHL20(2)                                               <---------AHL20(2)                    <------MYB83                                               --------->AHL20(2)                 --------->ARR14(1)                                            <---------AHL20(2)                    --------->CCA1(2)                                           <---------AHL20(2)                    --------->ARR14(2)                                           --------->AHL20(2)                    <---------ARR11(3)                                         --------->TOE2(3)                       --------->ARR11(1)                                        <--------HAHB4                   --------->TOE1(2)      <----                                        --------->ATHB12                <---------ANAC46        -----                                        --------->YAB1                  <---------ANAC58      -------                                        <---------ICU4                  <---------ANAC58    <--------                                       --------->ICU4             --------->AHL20(2) ----------->GT1        ----------->GT1                <---------YAB1             <---------AHL20(2) <------MYB46(1)        --------->YAB1--------->LBD16  <---------ATHB12       <----------DOF2    --------->ARR11(3) ----->TEIL      --------->GLK1(1)  ------>ZmHOX2a(1)         <---------DAG2     <---------ARR14(2) -----ATHB12     <---------GLK1(1) <---------MYB59         <-----------GT1     ----------->ARR10<----   gaatttcaaatggtaacaggtttccccaattcgagttcctaatcattaattttatggaatttcactttttaatttcgtgcgaagatttggttaaaccgga  1750000                                              --------->ATHB12                               <---------CCA1(2)         <---------YAB1                  <----------DOF2     <-----------GT1          ------->TEIL--------->ATHB12                             <---------At4g35610 -----GLK1(2)        ------->TEIL <---------ARR11(3)   --------->YAB1                 ------->TEIL ---->ARR14(2)     ------->GAMYB <---------CCA1(2)   ------->TEIL            ------->GAMYB  --------- -->LBD16         --------->MYB46(3)    <---------WOX13(1)--------->ATHB12   ----------->RAV1(1) -LBD16  <----------DOF2   <---------ANAC46 <---------WOX13(1)               --------->TOE2(3) -----ARR14(2)  --------->MYB52(1)--------->ARR11(3)<---------CCA1(2)       --------->MYB46(3)  <----   atcgtttttgcctttgtctaacggaccctacgtatatatctcattgattgatttgaatcttcattggaattgcattcaaccacaaatgcagcttttgtta  1750100                                                  --------->ALFIN1                                         --------->ICU4                        <---------MYB52(1)      <------ZmHOX2a(1)                   ------------>MYB.PH3(1)    <---------TOE2(3)             ----------->GT1             <---------YAB1            <---------TOE1(3)           <---------TOE2(3)       --------->ATHB12                  ---            --------->MYB59            --------->YAB1   --------->MYB111(1)           <---------WOX13(1) -->GT1     <---------TOE2(3)        <---------WOX13(1)<--------P <---------WOX13(1)--------->ATHB12 -----AHL20(2)   ----------->ARR10 --------->ATHB12  <---------ANAC46    <---------YAB1     <--------   aatttcaataggtttaggttaaatccgttattgaaatcgattgatgatgaggatggggtagtttgttcattgattttgataaaaattgattgatatgata  1750200  Previous    Next  AGI:  At1g05810.1    Description:  ARA/Ara-1/AtRABA5e/AtRab11D (Arabidopsis Rab GTPase homolog A5e); GTP binding. Identical to Ras-related protein ARA-1 (ARA-1) [Arabidopsis Thaliana] (GB:P19892); similar to AtRABA5d (Arabidopsis Rab GTPase homolog A5d), GTP binding [Arabidopsis thaliana] (TAIR:AT2G31680.1); similar to small GTP-binding protein (GB:AAA68983.1); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579) Range:  from: 1748313    to: 1749459    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g05820.1    Description:  peptidase. similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G43070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45292.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Peptidase A22, presenilin signal peptide; (InterPro:IPR006639); contains InterPro domain Peptidase A22B, signal peptide peptidase; (InterPro:IPR007369) Range:  from: 1749681    to: 1753766    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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