Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->LBD16           ------->MYC3           <-------MYC3     --------->TGA1a                                            --------->ANAC58          <---------ANAC58  --------->O2                                               --------->ANAC55(2)          <---------TGA1a<---------ZAT14                                               --------->ANAC58          <---------ANAC55(1)                                                          --------->ANAC55(1)     <---------YAB1<---------HSFB2a(2)                                                 <---------ANAC55(2)  --------->ICU4   --------->HSFB2a(2)                                                 --------->ANAC46 -->MYC4  --------->TGA1a--------->ZAT18                                      --------->ANAC58 -->MYC2  <---------ANAC58  <---------TGA1a      --------->ANAC46             --------->ANAC46     -- ---MYC2  <---------ANAC46  <---------O2         <---------ALFIN1             --------->ANAC58     <- -->MYC3  --------->O2   <---------ZAT18--------->YAB1                     <---------ATHB12        -- ---MYC3  <---------O2 --------->ZAT2  <---------AHL20(2)         --------->YAB1      <---------LBD16   tgcgattatgaaacgtgtgttcccgagcacacttgggctaaataataatccacactgcaaaaatacaatcacaacaaatcaagacacatacggaactaga  1668500                                             --------->At4g35610                                         ------>ZmHOX2a(2)                                         ========================HOX2a_HOX2a                                        =========================HOX2a_HOX2a                                        <------ZmHOX2a(2)                                        --------->At4g35610                                       --------->ARR14(2)                                       --------->ARR11(3)                                       <---------AGP1                                       <---------ARR11(3)                                       --------->GLK1(2)                                       <---------ARR14(2)                                       <-----------ARR10                                  <---------TOE1(1)                                 --------->SPL7                               <---------SPL7<---------ZAT2                               --------->TOE1(2)                          ----------->GT1                               --------->TOE2(2)               --------->CCA1(2)            <---------REM1(1) --------->ANAC55(2)--------->ANAC58       <---------ANAC46           <---------TOE2(3) --------------->AtSPL3           --------->ARR14(2)     --------->AHL20(2)   <---------ANAC58   --------->ZAT2   <---------ARR14(2)     <---------AHL20(2)   <---------ANAC58   <---------At4g35610<-------TEIL --------->GT1 ----------->GT1<---------ANAC55(2)--------->ANAC58      --------->ALFIN1      -------- --------At4g35610   <---------ICU4   <------ZmHOX2a(1)   <------ZmHOX2a(1) <--------P       -------- ------->At4g35610  --------->ICU4<---------TOE2(1)---------->DOF2    <-----------HVH21  <------ZmHOX2a(1)   gagctaaaaaattgatgtagcaaaaattgcatacgtacgaggatctgagctacgaaaggaggaagatacaagggtcgggttagatagtagaggacacgat  1668600             ---------->DOF2        --------->HSFB2a(2)       --------->ANAC58        <---------HSFB2a(2)       --------->ANAC58           <---------At4g35610      <-------TEIL    <---------ANAC46                       --------->At4g35610  ----------->ARR10   <---------ANAC58                 --------->SPL7  <---------TOE2(3)   --------->ANAC55(2)            <---------ZAT18  <---------TOE1(3)   <---------ANAC58               --------->ZAT18                       ---------- ->ANAC58 ----------->RAV1(1)   --------->MYB52(1)  <---------ANAC58                     <---------HSFB2a(2) ->ANAC58<----------ID1    <---------YAB1           <---------ANAC58      <----------DOF2--------->HSFB2a(2)   agctaaggttcgcgacaaagagttgcgttatgaagaacggaagggaagaggctagcgtacttccgctctcccatcccttttgttctctcttctcaaagag  1668700                                                                                   --------->SPL7                                                                                 --------->LBD16                                                                                <---------HSFB2a(2)                                                                                --------->HSFB2a(2)                                                                               <---------LBD16                                                                             <---------ARR14(2)                                                                             <---------DEAR3(1)                             ---------->DOF2  <---------YAB1  ---------->ID1 --------->ARR14(2)                          <---------HSFB2a(2)<---------ARR11(3)             <---------GLK1(1)                          --------->HSFB2a(2)--------->ARR11(3)             <---------ABI4(2)                     <---------ICU4 --------->ARR14(2)   <---------ARR14(2) --------->ATERF1(1)                   --------->GLK1(2)--------->GLK1(2)    --------->ARR14(2)<---------ATERF1(1)    <--               --------->ANAC58     <---------ARR14(2)  <------ZmHOX2a(1) <---------DEAR3(1)     ----               --------->ANAC46    <---------GLK1(2)  --------->MYB59     <---------RAP2.3(3)   ----- >DOF2         --------->ANAC58--------->ANAC46--------->YAB1<-----------HVH21 <------NtERF2  ------>ZmHOX2a(1)   aagactttggtcataacacacaatctttccaaaacgcgattcttcaatatcatagttaggatttgtcacattaaggggggctccggaagacatctcctcc  1668800                                                           <------MYB83                                                           <------MYB46(1)                                                          --------->MYB111(1)              <---------GLK1(1)                           --------->MYB59              --------->GLK1(1)                           --------->MYB46(2)              <---------ARR14(2)                          --------->MYB52(2)          --------->ETT(1)                               <---------MYB55(1)       <------MYB83                                    --------->TOE2(3)       <------MYB46(1)                              --------->MYB52(1)          <-------TEIL      <---------MYB46(3)                            ------>MYB46(1)     --------->ATHB12     <---------ANAC58                               ------>MYB83   --------->ANAC46     <---------ANAC58                             --------->MYB46(3)  <<<<<<<<<<<<<<<<<LFY     <---------ANAC46        --------->YAB1      --------->ANAC58  --------->ANAC58   <---------MYB46(3)   --------->AHL20(2)       --------->ANAC58  --------->ANAC58 -------TOE1(2)   --------->LBD16               ------->TEIL   <-----------RAV1(2)         <---------ZAT14 -->ZmHOX2a(1)--------->ARR14(2)           ----------->RAV1(2)<-------TEIL   <---------ANAC58 ---->TOE1(2)<---------GLK1(2)        --------->ARR14(2)<---------MYB52(1)   <---------ANAC58   -----   tacgatggctggtcggaatccccaaaaaaaatgacaatactatctgcctgaacccaacgttaggttcagacgaaacattgggttcatatagactgcaata  1668900                                                --------->AHL20(2)            <---------GLK1(1)                                                -------->HAHB4                --------->GLK1(1)                                                --------->YAB1        <------------CBF            <--                                               <---------YAB1        --------->ATHB12  --------->MYB46(3) *TSS                                    ----------->GT1            <---------YAB1--------->TOE2(3) ---->YAB1                    --------->ZAT14 <-----------TBP      <-----------HVH21 <-----------GT1   acaactaatttgcaacctcttccaagttttagttcagacgagatggctaattatagatgatgtattagttgtcattggggaattcattaaccactcgttt  1669000                                      <----------DOF2                                      <---------DAG2                                 <---------ANAC58                                 <------MYB83                                 <---------ANAC58                                 <------MYB46(1)                                --------->MYB111(2)                                --------->MYB111(1)                                --------->MYB46(2)                                --------->MYB52(2)            <---------ICU4                                --------->MYB59               --------->YAB1                               <---------MYB55(1)            --------->ICU4                              <---------MYB52(1)     <-------GAMYB                                 <-           --------->YAB1    <-------GAMYB          <------MYB83                                  <--      <---------ANAC58       <-----------HVH21      <---------MYB46(3)                      ---------      <---------ANAC58      <----------DOF2         ----------->GT1                    ---------->ID1 -------AHL20(2)  <---------TOE2(3) <-------TEIL    <------MYB46(1)           <---------ARR11(3)<----   taaaatgggcttatcagatttatgtttttgctgttaggtgcttttttaaacggctggttgaaaatgatcacttgtttcaacatatttttgtccgatttct  1669100                            --------->AHL20(2)                            <---------AHL20(2)                           <---------AHL20(2)                           --------->AHL20(2)              --------->ARR14(2)              --------->GLK1(2)              --------->ARR11(3)      --------->At5g28300  <---------AHL20(1)      <-------GAMYB     <---------AHL20(1)     ----------->GT1    --------->AHL20(1)  <<<<<<<<<SPL5         --------->AHL20(2)  <<<<<<<<<SPL4 --------->TOE2(2)  <<<<<<<<<SPL1 --------->TOE1(2)     --------->YAB1 --------------AtSPL3   <---------AHL20(2)                              <-----------GT1      <------- ----------------SPL14 --------->AHL20(2)                             --------->AHL20(2)  <----------DOF2 >GLK1(1)     <---------ARR11(3)     <---------ATHB12       --------->TOE2(3)         <----------DOF2 -----YAB1    <---------ARR14(2)   --------->WOX13(1)     <-----------GT1          <-----------GT1   aattgtacggttacaaaatctgcgaataaattattttcaatcaaacttatagatgttttttttcttaacaaattatacaagtttttttctttcttttttt  1669200                                                                                           <---------YAB1                                                                                          <---------AHL20(2)                                                                                         --------->YAB1                                                                                      --------->ATHB51                                                                                      <--------HAHB4                                                                                      <---------ICU4                                                         --------->TOE2(2)            <--------ATHB1                                                         --------->TOE1(2)            -------->HAHB4                                                 <---------YAB1                       --------->YAB1                                              <---------AHL20(2)                     <---------YAB1                                              <---------AHL20(1)                     <---------ATHB51                                              --------->AHL20(1)                     --------->ICU4                                           <---------AHL20(2)                        --------->AHL20(2)                       <---------TOE2(3)  <---------AHL20(2)                       <---------ICU4                       <---------YAB1     --------->AHL20(2)                    --------->YAB1                   --------->YAB1        <---------YAB1 --------->YAB1         <---------AHL20(2)                  <---------ATHB51     --------->YAB1  <---------TOE2(3)   <----------DOF2--------->AHL20(2)                --------->YAB1         <--------HAHB4  <---------YAB1  --------->GLK1(2) --------->AHL20(2)               --------->ZAT6         <---------YAB1<---------YAB1    <---------GLK1(2)  <---------AHL20(2)        <---------ARR14(2)    --------->ZAT14 --------->AHL20(2)   --------->YAB1  --------->YAB1 -----------------ANAC81 --------->ARR11(3)--------->AHL20(2) ------------>CBF--------->AHL20(2)   ttgtttggcagttcttaacaataataagatagtttagtctattattaatttattattaacataagacaataagattcctttttaataataattaaaatag  1669300                                                                                          --------->ANAC58                                                                                      --------->HSFB2a(2)                                                                                      <---------HSFB2a(2)                                                                                      --------->HSFC1(1)                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                --------->ARR14(2)                                                                                <---------GLK1(2)                                                                                <---------ARR11(3)                                                                                <---------ARR14(2)                                                                                <---------AGP1                                                                                --------->ARR11(3)                                                                                <-----------ARR10                                                                                --------->ARR14(3)                                                                                <---------ARR14(3)                                           <---------YAB1                      <---------CCA1(2)                                         <-----------GT1                  <---------ARR14(2)                                        <---------YAB1                    --------->GLK1(2)                                     <---------YAB1                       --------->ARR14(2) --------                                     <---------AHL20(2)                  <---------GLK1(2)--------->ANAC58                --------->YAB1    <---------AHL20(2)              --------->WOX13(1) <---------LBD16               --------->AHL20(2) --------->AHL20(2)            <---------ATHB12--------->AGP1           ------------>CBF    --------->GLK1(2) *TSS---------->DOF2   --------->LBD16<---------HSFC1(1)   acaagtagtagaatacaataaatatgcaacgagaatttttttattactataatgcaaaagtatcaaatcaatccagaatccagatcttctggaagcaaag  1669400  Previous    Next  AGI:  At1g05580.1    Description:  ATCHX23 (CATION/H+ EXCHANGER 23); monovalent cation:proton antiporter. similar to ATCHX21 (CATION/H+ EXCHANGER 21) [Arabidopsis thaliana] (TAIR:AT2G31910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42759.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 1665463    to: 1668901    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g05590.1    Description:  ATHEX3/HEXO2 (BETA-HEXOSAMINIDASE 2); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds. similar to ATHEX2/HEXO1 (BETA-HEXOSAMINIDASE 1), beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT3G55260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67165.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76146.1); similar to hypothetical protein OsJ_023880 [Oryza sativa (japonica cultivar-group)] (GB:EAZ40397.1); contains InterPro domain Glycoside hydrolase, family 20, catalytic core (InterPro:IPR015883); contains In Range:  from: 1669349    to: 1671875    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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