Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->ARR11(3)         <---------YAB1  --------->AHL20(1)                ----------->GT1           ---------->DOF2 <-----------GT1         <---------AHL20(1)         <---------ATHB12            <---------YAB1 ------>ANAC46           <---------ARR11(3)    --------->YAB1           <---------ICU4 ------>ANAC55(2)  ------>ZmHOX2a(1)         <---------ARR11(3)        <---------ATHB12 ------>YAB1     ----------->RAV1(2)        --------->RVE1(1)<----------ID1  <----------DOF2<--------   acataaccattcttatacctcctgcaatatatagattactagataaatatcgtaatcaagaatgtgacaaaaaatcattcttttgataaaagttatacct  1664000                                              --------->At4g35610                                         <---------ANAC58                                      ------->PIF5                                      <-------PIF5                                     --------->TGA1a                    <-----------RAV1(2)  <---------ANAC58                  <-----------HVH21  <---------TGA1a                <-------TEIL    --------->DEAR3(1)              <---------At4g35610                ==         --------->ANAC58      <------NtERF2  <---------At4g35610             --------->YAB1       -- ---GT1  --------->ANAC58      --------->ATERF1(1)              --------->At4g35610           <------   cttacaagaccaagaaaatgcatcaggcatggcatcgcctcgtgcgtctgctaaccatttcttcacatctgcgtttttaagcacaatttagacgagattg  1664100                                                                                         --------->ANAC55(1)                                                                                         <---------ANAC55(2)                                                                                         --------->ANAC46                                                                                         --------->ANAC58       ---------->DOF2                               --------->TOE1(1)                   --------->ANAC58 ---------->DOF2                                    <---------LBD16             --------->ICU4 ================================HOX2a_HOX2a       --------->TOE1(2)          <---------At4g35610   < ---->ZmHOX2a(2)             --------->ICU4        --------->TOE2(2)   <---------YAB1    --------->ANAC55(2) ---WOX13(1)              <------ZmHOX2a(1)     <-----------GT1        <---------ANAC55(2)      -----   atcgaaagaaaaagagaccaatagagaaggactaattaagaagagggaattaacctcggagaaagactccattacgagagagatgatgaacacgcaagag  1664200            <-----------HVH21           --------->O2           <---------O2           --------->ANAC46        <---------WRKY12                                                     <----------DOF2        <---------WRKY45                                                    <---------ANAC58        <---------WRKY38(1) <---------TOE2(3)                               <---------ANAC58       --------->WRKY18(1)  <---------TOE1(3)                            <---------MYB52(1)     <------MYB46(1) --------->SPL7--------->AHL20(2)                  <---------ICU4     <------MYB83    --------->RAP2.6(3)                            <---------ALFIN1  <------ZmHOX2a(1) --------->MYB52(1)                            ------>ZmHOX2a(1)          <------- ---------TOE2(3)   --------->ARR14(2)       <-----------GT1   ------>ZmHOX2a(1)   <---------CCA1(2) ---->CCA1(2)----------->HVH21<------ZmHOX2a(1)       <-----------GT1  --------->AtMYB61 <----------DOF2   atgaggatggtcaacgtgacccgaacggctaaggaaataaactaaattcactcttcttacttctcctcctccaccattactttccatctctctttctttt  1664300                                                   --------->ANAC58                                                   --------->ANAC58<---------ARR11(3)            ----                                         --------->ARR11(3)        <---------GLK1(2)             <---                                         <---------ARR11(3)      ----------->ARR10 ---------->DOF2  <---------AtMYB61           <----------DOF2      --------->ANAC46--------->ARR11(3)            *TSS ---DOF2      <---------AHL20(2)     ---------->DOF2   ---------->DOF2 <-----------GT1       <-------   tgttttggtcttcgattttattctctgtgtgtcttttacaaaagaacttatataagccaaagctacttagatttttcaaaactctcaaagagttttcact  1664400                                                                                         <---------ZAT14                                                                                         --------->ZAT14                                                                                         --------->ZAT18                                                                               <------------CBF                                                                             <---------AHL20(2)                                                                             --------->AHL20(1)                                                                            --------->AHL20(2)                  <---------ARR14(2)                                   ------------>CBF  <---------REM1(2)                  --------->ARR14(2)         <----------DOF2  <-----------GT1--------->AHL20(2)    <----------DOF2 ------>ZmHOX2a(2)    <----------DOF2    <-----------GT1 <---------AHL20(2)  ----- ----->ZAT14     <------ZmHOX2a(1)   <XXXXXXXXXXXXXXXXXXXXMIR157A-C<---------DAG2    <---------------AtSPL8 ------ZAT14 ---------->DOF2         <XXXXXXXXXXXXXXXXXXXMIR156H   <----------DOF2--------->ATHB12 ----GT1 <----------ID1              <----------DOF2      ----------->TBP--------->WOX13(1) ---------   tctctgcttttgagacaaaggatcggactaaaacaagggctttctttcttttgttaacttatatacaccctttttcaattaaattgatttgtacacagaa  1664500                     <---------ICU4                     --------->ATHB12                     <--------ATHB1                     -------->HAHB4             <---------AHL20(2)                     --------->ATHB51          --------->AHL20(1)                    --------->AHL20(2)         <---------AHL20(1)                    --------->ICU4             --------->AHL20(2)                    <---------AHL20(2)         --------->ARR11(3)                    <---------YAB1             <---------ARR11(3)                    <---------ATHB51           <---------AHL20(2)                  --------->YAB1          <---------AHL20(2)       <----------TaMYB80                 --------->AHL20(2) <----------ID1    <---------At4g35610                  --------->YAB1    ---------->DOF2 ----->DOF2     --------->AHL20(2)      <---------YAB1----------->GT1 >ANAC46--------->KAN4(2)      <---------YAB1 --------->AHL20(2)   ---------->DOF2           <-------   aagtttagcttattcccaaaaaataattgaattttgaatgttattaaaatatatttgagtaaaaagacaaaaagaaacaatgagacatgtttgtggagac  1664600                                                  <---------ARR14(2)                                               ------->GAMYB                                            --------->MYB52(1)                                            <---------DOF5.7(2)          --------->ANAC46               <-------GAMYB          --------->ANAC58             --------->LBD16          --------->ANAC58            <---------ANAC58             --------->SPL7       --------->TOE1(2)              <---------ANAC46          --------->TOE1(1)      --------->YAB1                  <---------ANAC58         <---------LBD16                      <     <---------ATHB12                <---------LBD16   <---------ALFIN1    ---------->DOF2         <-    ------>MYB46(1)               <----------DOF2 --------->ARR14(2) <---------ATERF1(1)           --    ------>MYB83             --------->DAG2<---------WRKY12    --------->HSFB2a(2)              ----- ---ID1--------->TOE2(2)    ---------->DOF2<---------WRKY38(1) <---------HSFB2a(2)              <----   aaaaccaaacatacgcatagatagagatgaaaaagtctttgcgggttaacggaaaccgcacatttctcggacgactccaaagaacaaatatagggtttcg  1664700                                    <---------ARR11(3)                                <---------AHL20(1)                                          ---------         <----------DOF2        --------->AHL20(1)                             >>>>>>>>>>GATA-3        <---------DAG2         --------->AHL20(2)  <----------DOF2             >>>>>>>>>>GATA-4 ------ZmHOX2a(2)     <---------ANAC58          <-----------GT1                >>>>>>>>>>GATA-2 --------ARR11(3)     <---------ANAC58       <---------GLK1(2)    <----------DOF2 --------->DAG2 ------->ARR11(3)   <---------AHL20(2) <----------DOF2        ---------->ID1   >>>>>>>>>>GATA-1 ---->HSFB2a(2)     <-----------GT1 --------->ARR11(3)       <-----------GT1  --------->YAB1<-------- -----HSFB2a(2) <---------AHL20(2) <---------CCA1(2)     <----------DOF2     <---------YAB1--------->RVE1(1)   agatcactcaccttttgtttattttcttgataaatatatatcttttggattttctttctcttttttctcttttaatgctatgataaggcataaaaatctg  1664800                                                <------ZmHOX2a(1)                                         ------>ZmHOX2a(2)                                         ==============HOX2a_HOX2a                                        ===============HOX2a_HOX2a             ----------->GT1            <------ZmHOX2a(2)      --------->TOE2(3)                <---------ARR14(3)    --------->ARR11(3)                 --------->ARR11(3)    <---------ARR11(3)                 --------->ARR14(2)   <---------CCA1(2)                   --------->ARR14(3)                  <------MYB46(1)  <---------AHL20(1)                   --------->AGP1                      <------MYB83  --------->AHL20(1)                   <---------ARR14(2)         ----------->GT1  --------->ARR11(3)                   <---------ARR11(3)        <---------TOE2(3)  <---------ARR11(3)<---------TOE2(3) <---------GLK1(1)          <---------YAB1 >GLK1(2)---------->DOF2              --------->GLK1(1)          <---------TOE1(3)              ----- -ARR11(3)   <----------ID1          ----------->ARR10<----------DOF2     --------->MYB59 ---------->DOF2   aaaatatatcttaaagagaaaaaaggtttagtaagaagagagatcttgtaggagagttttatgggttatggttaatttggtcttagtctatgtaaagcta  1664900  Previous    Next  AGI:  At1g05577.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46110.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G59790.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G46110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67167.1); contains InterPro domain Protein of unknown function DUF966 (InterPro:IPR010369) Range:  from: 1662369    to: 1664397    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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