Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                   --                                                                 ----------->GT1                   <-                                                               <---------TOE1(3)                   <-              <---------At4g35610     <---------TOE2(3)        <---------TOE2(3)                   <-              <---------ZAT2          <---------YAB1     --------->ATHB12                          --  --------->RAP2.6(2)           --------------->AGL15   <---------YAB1                             --  --------->ANAC46--------->REM1(1) --------->YAB1 --------->At4g35610                           ---- ---->TOE2(3) --------->At4g35610  <---------YAB1  <---------At4g35610                        ------- ----YAB1 <-----------HVH21     <---------------AGL15   --------->ICU4--------->YAB1  <---------MYB52(1)   atagccgaaaccagtcagctacacgagtacaagacttattatggtatgtagtcatctcatgatttaagggtataatgaagtatcaactgttagtccccca  1624600    <---------ICU4   <---------YAB1   ------>ZmHOX2a(1)  <---------MYB59 ------>ZmHOX2a(2) ------ZmHOX2a(2) ------->ARR14(2) --------ARR14(2)                                                                       ----------->HVH21 --------ARR14(3)                                             <---------ATHB12        --------->LBD16 --------ARR11(3)         --------->ZAT14       --------->GLK1(1)                     <---------At4g35610 ------->ARR14(3)    --------->GLK1(1)         <---------ARR14(2)            --------->ICU4 ------->ARR11(3)    <---------GLK1(1)         --------->ARR14(2)         <---------YAB1----------->TGA1 ------->ARR10   --------->YAB1               <------ZmHOX2a(1)    <-----------HVH21 <---------ANAC46 -->LBD16    <---------YAB1      <---------CCA1(2)   ---------->DOF2<---------YAB1  <---------LBD16   agatcctaattgcatatgatcagaactctggactcgtttcttaagtgaggatttgcaaagctcaatctttgtcattgcgattatgttccggtgacgatgt  1624700              <---------ARR14(2)           --------->LBD16          --------->LBD16          <---------LBD16         <---------LBD16                                                                  -----------         <---------ANAC46                                                              --------->GLK1(2)        <---------LBD16                                                               <---------ARR14(2)     <----------DOF2                                                         <---------ARR11(3)  --------->GLK1(2)                                                          --------->ARR11(3)  <-----------ARR10                                                          <-----------ARR10  --------->ARR11(3)                 <----------DOF2    <----------DOF2     <---------GLK1(2)  <---------ARR11(3)             <----------DOF2      ---------->ID1---------->DOF2   <---------GLK1(2)   tcaaaatctttccggggatttagttccatcactgtctttcttttctatttgtttttgtctttaacaatgtcaaagtcaaaatctcaccgattctgtaaat  1624800                        --------->ATHB12              <-----------HVH21           <---------ANAC46           --------->O2 -------->ATHB1           <---------ANAC58                                    <---------MYB46(3)           <---------ANAC55(2)                                 <---------DEAR3(2)           <---------TGA1a                                    <---------At1g77200                  --           <---------O2<---------YAB1                       <-----------HVH21                      <-           <---------bZIP60(2)                          <---------DEAR3(1)                        <--           <---------ANAC55(1)                       <---------RAP2.6(2)                          ---           =================================================bZIP_DOF                              ---           --------->ANAC55(2)                       <---------ANAC58                    --------->GLK1(2)           --------->TGA1a                           <---------ANAC46       <---------LBD16 ---------           <---------ANAC58                          <---------ANAC58--------->ZAT18   <---------AHL20(2)          ----------->STF1      <---------ANAC58 <----------DOF2<-------GAMYB       <---------AHL20(1)        ----------->HVH21       <---------ANAC58--------->TOE2(3)    <---------ZAT18--------->AHL20(1) >GT1   ----------->TGA1--------->ATHB51     <---------ALFIN1 <---------DEAR3(1)   --------->AHL20(2)   tccaagttatatgacgtgtcattgtattattggtgcgagcgatagcacaacctttgcgtctgcgtcggtagcgaactcttcggaaatatataatctgtaa  1624900                                                                                     <-----------GT1                                                                                 --------->AHL20(2)                                            <---------YAB1                       <---------AHL20(1) ------->AHL20(2)                         <---------AHL20(2)                    --------->AHL20(2) --------AHL20(2)                         --------->AHL20(2)               ----------->GT1 -------AHL20(2)                  <----------DOF2                   --------------->AGL15      <----- ------>AHL20(2)    <---------AHL20(2)   <---------AHL20(2)     --------->GLK1(1)--------->AHL20(1) ------>YAB1       --------->AHL20(2) <---------AHL20(2)------>ZmHOX2a(1)---------->DOF2     <------- -->GT1       ------------>CBF   --------->TOE2(3)    *TSS      <---------GLK1(1)<---------AHL20(2)   ttaaaatgagactaatcccaatttaaaatcaaaaacctttttatttatttttgttttcctatagagatttcttagaaaagaaataaattacttctctttt  1625000                                    --------->ALFIN1                            --------->ARR14(2)                            --------->GLK1(2)                            ------->TEIL <-------GAMYB                                   <---------AHL20(2)                            <---------ARR14(2)                                    --------->LBD16                           <---------GLK1(2)                                    <---------LBD16                      <---------ARR14(2)--------->MYB52(2)                    --------->ARR14(2)                      --------->ARR14(2)<---------MYB46(3)                    <---------ARR14(2)                  <-------PIF5    <---------ANAC58                         <---------------AGL15 ----AHL20(2)     ------->PIF5    <---------ANAC46                        ----------------->AG ---DOF2      <---------At4g35610 <---------ANAC58                      <-----------GT1 --------->AHL20(2)   atttttcattcggtttagctcgtggaactgaatctggtgtgtttgttgatcagagtaatacggacattgcaatttttctaaatccggcgattaaatatgg  1625100                                              --------->ATHB12                                              <---------ICU4                                           <---------ICU4                                           --------->YAB1                         <---------ZAT2                                          <---------ATHB12                        --------->HSFC1(2)                                          --------->ICU4                          <---------HSFC1(2)           <-------GAMYB                --------->WOX13(1)                        --------->ZAT2          <---------DEAR3(1)         --------->ANAC58                        <------ZmHOX2a(2)         <------NtERF2               --------->ANAC58                    <---------HSFB2a(2)        <---------ORA47(2)        <---------GLK1(2)                  --------->ARR14(2)       <---------RAP2.3(3)        --------->ARR14(2)                 <---------ARR14(2)       <---------DEAR3(1)         <---------ARR14(2) <----------DOF2 --------->GLK1(1) --------->YAB1            ------>ZmHOX2a(1) <---------YAB1          <---------GLK1(1)   gtttcatagtcggcgttgtaatcggactcctcgtcggaatcgcaatcatcatcggctttgtcaagttggagaattctcgatccaagcttcgctctgaact  1625200                                                                                                 <---                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                           <---------MYB46(3)                                                                                           ------>NtERF2                                                                                           --------->ABI4(2)                <---------DAG2                                                             --------->MYB55(2)                <----------DOF2                                                            <---------ATERF1(1)         <---------ALFIN1                                                                 <---------DEAR3(1)       <---------ALFIN1                                                                   --------->ALFIN1    --------->ANAC58      ----------->GT1              <---------LBD16              <---------ARR14(2)    --------->PCF2       <---------WOX13(1) <-----------GT1<---------ARR14(2)       --------->ARR14(2)    --------->ANAC58<---------LBD16     <---------AHL20(2) --------->ARR14(2) --------->DAG2<------NtERF2   tgtgagaccccactctccctttttcggattgaaaatttcgattttttttcttcttaatcgggattttgtttctgttttataaggcgaatacggtggctgc  1625300                        <---------HSFB2a(2)                    --------->ARR14(2)                    <---------ARR14(2)               <---------MYB46(3)         --------->MYB52(1)<------ZmHOX2a(1)                 <---------ANAC58        ----------->TGA1--------->HSFB2a(2)                  <-------GAMYB        ----------->HVH21--------->LBD16                  ------>ZmHOX2a(1)      <------ZmHOX2a(1) <---------LBD16                   --------->LBD16  <---------ANAC58 --------->HSFB2a(1)    --------->LBD16<---------LBD16  <---------ANAC58 <------ZmHOX2a(1)      ------>ZmHOX2a(1)  <---------ANAC58  <---------ANAC46 <---------HSFB2a(1)  ----------->RAV1(2)<---------TOE1(2)                 -------- -------DOF2  --------->ALFIN1  <----------DOF2         ----------->RAV1(2)                <--------- --RAP2.6(2) <---------------------WRI1------>NtERF2  ------>ZmHOX2a(1)                 ----------->GT1 -At4g35610<---------DEAR3(1) <---------HSFC1(2)  <-----------GT1              <-----------RAV1(2) >ATERF1(1)<---------DREB2C(2)--------->HSFC1(2) <-----------GT1             <-----------HVH21  <----   ttttgcgaggatgacggtggaggattccaggaagcttttgcctcctgagttttatccttcctgggttgtcttctccgagcgtcagaagttgagttacaac  1625400                                                                                                    <                                                    --------->ANAC58                               <-                                        <---------ARR14(2)                                         <-                                     <---------ANAC58                                              <-                                     <---------ANAC46                     <---------YAB1      <------     --------->ANAC55(2)             <---------ANAC58 ---------->DOF2     --------->ICU4      <------ ->REM1(1)                     <----------DOF2      --------->ANAC46 <------MYB83             <------ --GT1                 <---------At4g35610          --------->ANAC58 <------MYB46(1)   <---------YAB1 -----ICU4             <---------CCA1(2)--------->ARR14(2)          --------->MYB59   <---------GLK1(2)   attacttacatattgatgtgttttcatctctctctttctgcgtattggaagaacacgaaagttttagaatttggtcatacttgggactgattcttgttgt  1625500  Previous    Next  AGI:  At1g05500.1    Description:  ATSYTE/NTMC2T2.1/NTMC2TYPE2.1/SYTE. similar to ATSYTD/NTMC2T2.2/NTMC2TYPE2.2/SYTD [Arabidopsis thaliana] (TAIR:AT5G11100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69290.1); similar to unknown [Populus trichocarpa] (GB:ABK94033.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN84059.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 1624954    to: 1629223    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version