Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------ALFIN1                                                                 <---------At4g35610                          ------->TEIL                        <<<<<<<<<<WRKY43                         <---------CCA1(2)                    <<<<<<<<<<WRKY38                         <---------GLK1(2)                    <<<<<<<<<<WRKY26                     <---------ANAC46                    <---------ANAC58                       <---- ---------ARR11(3)   <---------ANAC58    ------->TEIL    <---------ANAC46          ---------->DOF2 -------->ARR11(3)   <---------ANAC58 --------->AtLEC2   <---------ANAC58  <----------DOF2      -----   aagacctctgttcttaatcgattccttgaatctctcttccatgcacttcttgtaatgttccttggtcatcttctccactttgtccaaaagctcgagtgaa  1432500                                                                          --------->DAG2           <-                                        <---------GLK1(2)                ---------->DOF2    ---------                                        --------->ARR11(3)          ---------->DOF2      ---------->DOF2                           --------->MYB52(1)                <---------HSFB2a(2)      --------->TOE2(3)            <---------ALFIN1      --------->ATHB12           --------->HSFB2a(2)<---------------AtSPL3 -----GLK1(1)   --------->At5g28300   ----------->ARR10   <---------AHL20(2)    <---------------AtSPL8 ---->GLK1(1)  ----------->GT1   <---------YAB1          --------->AHL20(2)     --------------->AtSPL8   atcccatggttcacacactgtaatatcacaaacagatgattagattttgagttacacaattttatagaagaaaagaaaagtgagagtacctcaaagaagc  1432600                                                                             --------->HSFB2a(2)                                                                             <---------HSFB2a(2)                                                                            ------>ZmHOX2a(2)                                                                         --------->ATHB12                                    <---------WOX13(1)                  <---------YAB1                                  --------->ATHB12                    --------->YAB1                    <---------ARR11(3)                              <---------WOX13(1)      <-----------GT1 ------>ZmHOX2a(2)                       --------->HSFB2a(2) --------ALFIN1     --------->ARR11(3)                        <---------HSFB2a(2)         <---------CCA1(2) ->DOF2         <----------DOF2  <---------YAB1           <---------GLK1(2) <---------LBD16         <   cccagttttcacaagcgtctttgatcttctccatagtgattgctctctcttctccattaagcttctcgagattgatgatcgggaaactctccatctctct  1432700                                  <---------YAB1                         <---------MYB59                   <---------ANAC58     ---------->ID1        --------->AHL20(2)    <---------DAG2<----------DOF2            <---------YAB1        <---------AHL20(2)    <----------DOF2                       <---------YAB1                 -- ----------DOF2    <---------ANAC58   ----------->HVH21    <---------AHL20(2)                   -----   ctctttttttttaaatgggtttcttggcctaactttatgtttgacgcttttgaagtttgatataaatctgatgatcaaagacttggttttatagagagaa  1432800                                                                                      --------->ARR11(3)                                                                                   --------->YAB1                                                                                --------->TOE2(3)                                                                                --------->YAB1                                                                               <-------TEIL                                                                          --------->ANAC58          -                                                                          <---------ALFIN1          <                                                                          --------->ANAC58         <-                                                          <------MYB46(1) --------->ANAC46         <-    --------->ZAT18                          --------->ZAT14            <---------ALFIN1           -- -------->DOF2  <----------DOF2        --------->YAB1     <------MYB83<---------ALFIN1<---------ARR11(3) ----->DOF2 <------ZmHOX2a(1)         <---------YAB1     *TSS         --------->AtMYB61<---------YAB1   aagaagcgcagagaggagctttgagttacttctacgagttatcattctacagtcaatatttggttttttggaccacacacatccataatatcatttgtgt  1432900                                               <---------ANAC46                                               <---------ANAC58                                            --------->DAG2                                           ---------->DOF2                                    -------        <-----------GT1        <---------At5g28300--------->REM1(2)                           <------ -------->ATHB12              <-----------GT1  <---------ANAC58                              -------- ---------ICU4        --------->DAG2    --------->AtMYB61                      <---------TOE2(3) --------ATHB12      ---------->DOF2--------->ETT(2)            <------------------------ANAC81 --------YAB1   --------->AHL20(2)  <---------ETT(2)    <----------DOF2   <----------DOF2    <------- ------->ICU4   ------------>CBF    --------->WRKY38(1) <---------DAG2 ---------->ID1      --------->YAB1   aatgattttttaacaaaattcaataaagtatgttacggtcgaccaaaaagcgtgaacacttttttttgtttttgttcttttaatgttttggactaataat  1433000                                                                        -------->HAHB4                                                                        <---------ICU4                                                                        --------->YAB1                                                                        -------->ATHB1                                                                        <--------HAHB4                                                                        --------->ATHB51                                                               --------->YAB1                                                            --------->WOX13(1)                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         <---------ARR11(3)                                                         --------->ARR14(2)                                                         <---------AGP1 <---------AHL20(2)                                                         --------->AGP1<---------ATHB51                                                         --------->ARR11(3)    --------->ANAC58                                     <---------ARR14(2)    --------->ANAC58   --------------->AGL15            <---------CCA1(2) <---------YAB1  ---------->DOF2      <---------------AGL15          --------->YAB1   <---------ATHB12 -->YAB1             --------->At4g35610       <------ZmHOX2a(1)       --------->ICU4               - ---ICU4        --------->YAB1    ---------->DOF2   <-----------HVH21  <---------YAB1            ---- ->ICU4 --------->MYB52(1)    <----------ID1   ===================HOX2a_HOX2a                  <----- --ATHB12  ----------->GT1  ---------->DOF2    ==================HOX2a_HOX2a                  <------   caacaaaagcaaacagtataatcaactcaaaaaagaaaaagaaaacagaggaactatcagatctatcaaactaattattattcagcctctgatgtttaac  1433100                                   <---------AHL20(2)                                   --------->AHL20(2)                                   --------->AHL20(1)                                               -                                   <---------AHL20(1)                                            ---- -------->REM1(2)                 --------->AHL20(2)                        <------MYB83         <--- --->GAMYB           ----------->GT1                                       <---------MYB46(3)    <--- ----At5g28300   --------->YAB1   <---------AHL20(2)         <-----------GT1<------MYB46(1)      ---- -----GT1  --------->ANAC46 --------->YAB1        --------->AtMYB61        --------->MYB59<---------LBD16   cgtgtataaatccacataatcagaagtaaattagaattaaatttagaatagaccacaaggttttatccaaactgagttgggtcgtccaagtcttcggaaa  1433200                         --------->YAB1                        <---------YAB1                   ----------->GT1                   <------MYB83--------->TOE2(3)                   <------MYB46(1)                  --------->MYB111(1)            ---------->DOF2    <---------DAG2         --------->ANAC46<---------ICU4        --------->DAG2   <---------ICU4 ------>ZmHOX2a(1)--------->MYB111(2)   ----------->HVH21  <---------YAB1 -------->TOE2(3) --------->MYB46(2)<---------ANAC46  <---------ICU4              <-----------GT1 ----->ARR14(2)   --------->MYB59   <---------ANAC58  --------->ATHB12   <---------AHL20(2) ------ARR14(2)  <---------MYB55(1) <---------ANAC58 <---------YAB1      --------->AHL20(2) ------ARR11(3)  <--------P <-----------GT1   ---------->DOF2   --------->YAB1 ----------->GT1 ----->GLK1(2)<---------TOE2(3)--------->TOE1(3)     --------->ICU4    <----------DOF2   atcctaaatatactcaaaggtaggtgataataaccttatcgtgtgacataaagtcatgattactattcatcacctttaatttagtaactagctatagaaa  1433300                ----------->GT1       ----------->GT1               --------->ETT(1)      <---------TOE2(3)                   <-----------GT1               ----------->GT1       <---------YAB1                  <---------AHL20(2)      --------->AHL20(1)             <---------TOE1(3)            ------->TEIL                    <--      --------->AHL20(2)          <---------AHL20(2)           <---------ANAC46                   <--      <---------AHL20(2)      --------->AHL20(2)            --------->DEAR3(1) <-----------HVH21 ----     --------->AHL20(2)       <---------AHL20(1)      ----------->HVH21 <---------YAB1    --------->ATHB12     <---------AHL20(2)       <---------AHL20(2)   --------->AHL20(1)--------->AHL20(2)  <-------TEIL   --------->YAB1     --------->AHL20(2)          --------->AHL20(2) <---------YAB1<---------At4g35610   actaaaaataatttgggtcggaaaaaatataaaaaatttatggttatacaaaatatatgacagcgacgtatattattactcagtcagacgattcattgtt  1433400  Previous    Next  AGI:  At1g05010.1    Description:  EFE (ETHYLENE FORMING ENZYME). Identical to 1-aminocyclopropane-1-carboxylate oxidase (ACO) [Arabidopsis Thaliana] (GB:Q06588;GB:Q94K94;GB:Q9S9K8); similar to ACO2 (ACC OXIDASE 2) [Arabidopsis thaliana] (TAIR:AT1G62380.1); similar to putative 1-aminocyclopropane-1-carboxylate oxidase [Brassica oleracea] (GB:AAO13735.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 1431189    to: 1432857    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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