Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ANAC46                             --------->TGA1a                             --------->O2                             <---------O2                            --------->LBD16                            ------>NtERF2                           --------->DEAR3(1)                         <---------ZAT2                         --------->At4g35610                         <---------At4g35610                         --------->ZAT2                   <---------At4g35610                   --------->MYB52(1)                     --------->At4g35610                    <---               --------->MYB52(1)                  <---------HSFB2a(2)                           ==== ------->ARR14(2) ----------->HVH21             --------->GLK1(2)                               ----- ------->GLK1(1)  ------->GAMYB                --------->ARR14(2)         <---------ATHB12  <-------- --------GLK1(1)  =====================MYC_MYB <---------ARR14(2)   --------->ZAT18    <---------ZAT2 --->YAB1  <---------ARR11(3)<---------TGA1a   <---------GLK1(2)  <---------At4g35610 ------->TEIL<--   gaattctcttcaacatctaactgactgagccgcgtgagtaattgagcccgattctcgataagctgttgagcgaacaatgaagaaaacgaagctcgttaga  1298600                              <-----------GT1                             <---------ATHB12                           <---------ICU4                          ------>ZmHOX2a(1)                      --------->ARR14(2)    --------->At4g35610 --------->YAB1 ---ZmHOX2a(2)     ------->GAMYB ================================HOX2a_HOX2a        --------->At4g35610 ---->AGP1       --------->At4g35610             <---------At4g35610              --------->ANAC58 -MYB52(1)       <---------At4g35610             --------->At4g35610  ----------->GT1 -----TEIL      --------->MYB52(1)        <-------TEIL     --------->TOE2(3)      --------->ANAC58  -   tccatgagctacagaactcaactgaatcctaatcactctatatatacattaagctgcagaaacttaatcggaagggaaattgataagaaacatcacaaaa  1298700                --------->HSFC1(2)                <---------HSFC1(2)                <---------HSFB2a(1)                               --------->AHL20(2)          --------->At4g35610                                 ----------->GT1        --------->YAB1                           --------->ICU4----------->GT1       <---------ATHB12                  <---------ANAC46--------->LBD16     --------->WOX13(1)               <---------ARR14(2)<---------HSFB2a(2)               -----------  --------->ANAC58                    --------->ARR14(2)--------->HSFB2a(2)      <---------ARR11(3)  --------->ANAC58   --------->HSFB2a(2)<-------TEIL   <---------LBD16           --------->ARR11(3) --------->DOF2 --------->HSFB2a(1)  <------ZmHOX2a(1)--------->MYB52(1) ----------->RAV1(1)    -----   cccaaagcaatcagaagaaatttctcgatttaacagagaggattcgtagaaatgactaccggaagcgataaaatccaccagaagattttagttggaaaaa  1298800                                                            --------->CCA1(2)                                                           --------->ARR11(3)                                                           --------->ARR14(2)                                                           <---------ARR11(3)                                     ---------->DOF2       <---------ARR14(2)                                 <---------GLK1(1)       ----------->ARR10                                 --------->GLK1(1)--------->REM1(1)                        ---------->DOF2      --------->At4g35610        <---------HSFB2a(2)         --------->TOE1(2)   --------->ALFIN1--------->HSFC1(2)         --------->HSFB2a(2) >GT1  ------------------------>ANAC81       <---------HSFC1(2)   ------>ZmHOX2a(2) ---->AHL20(2)        <---------ATHB12      --------->GLK1(2)   --------->ARR11(3)   atatacagaaacctagaaaatcaaatcaaaggtggaaatcaaagagaagcttacatcagaagatttgatctcttcgagtaacttcatcgcattcttctcc  1298900                                                                                              <------                                                                                              -------                                                     <-----------ARR10                       --------                                                     --------->GLK1(2)              <-----------GT1                            <XXXXXXXXXXXXXXXXXXXXMIR399B/C                      ---------------------                            <XXXXXXXXXXXXXXXXXXXXMIR399A                <---------ANAC58     <-------                       <---------ZAT14               <---------ARR14(2) <---------ANAC58     <-------                       --------->ZAT14              <---------GLK1(2)  --------->At4g35610   --------                    <---------------AGL15     <---------ZAT6           <---------At4g35610   <-------        <----------DOF2<---------REM1(2)      --------->ALFIN1     <----------DOF2<----------DOF2      <---------DAG2=================================================================================   atcactcactctttctctctctctctacagggaaattttgttttggcagtgtgagaatctctctctaggctttagcttcccgctctttacatttcgccta  1299000 *TSS ---------AGL15                                                                               <------ -------->AGL15                                                                 <---------RVE1(1) --------->AGL2                                                                --------->ARR11(3) >WRI1  <-----------GT1   ------------>CBF                                     <---------ARR11(3) ----------AGL1        <---------DAG2     --------->AHL20(2)                   <---------AHL20(1)   - ----------AG ------>NtERF2           --------->AHL20(2)           ----------->GT1       ------>NtERF2 --------->AGL1  <----------DOF2     <---------WOX13(1)       --------->AHL20(2)<---------CCA1(1)   < ----------AGL3 <---------DAG2<---------DAG2             <---------AHL20(2)    --------->AHL20(1) <-- =========MADS_MADS    <----------DOF2<---------AHL20(2) --------->AHL20(2)---------->DOF2   <-------GAMYB   tattggaaattttctctgcctttcgcttttcaatttttgatttattaaacaaaaacaaattaaaaaaaatggaatataaaagatattttgaggcccgttg  1299100                                                                                                  ---                                                                                                 <---                                                                                               <-----                                                                                               ------                                                                                              -------                                                              <---------YAB1                  <------                                                             --------->AHL20(2)               -------                                                       ----------->RAV1(1)                    -------          <----------DOF2                            <---------WRKY38(1)             ------>ZmHOX2a(1)          --------------------->WRI1                 <---------WRKY12               --------->TOE2(3) ---MYB52(1)                                         <---------ETT(2)               --------->TOE1(3) ----->ZmHOX2a(2)                                   --------->WRKY18(1)          <---------ARR14(2)-- ---------MYB59               <-----------GT1    --------->MYB59           <---------CCA1(2)  <------ -------AGP1        --------->At4g35610   <-----------GT1    <---------AHL20(2)  --------->ARR14(2)<-   gatctaattgggctttgtaagtagctcaattttcactcgatgattttcaattcggtccaccattaaaattgaaacccatatcaaatccttaacaaaatta  1299200                                                                                    <---------ICU4                           <---------ZAT14                                          -------->HAHB4   --------->AHL20(2)------>MYB83                                                   --------->ATHB12 ------>AHL20(2)     ------>MYB46(1)                                                --------->YAB1 ------YAB1          -------->P                                                    --------->ICU4 ----ICU4           --------->MYB55(1)                                             <---------YAB1 -->ATHB1          <---------MYB55(2)                                              <---------ATHB12 -->ICU4           <---------MYB111(2)                                            <---------TOE2(3) ---YAB1 <----------ID1    --------->ZAT14                                      <---------AHL20(2) -->AHL20(1)       <---------MYB46(2)                       <----------DOF2    <---------YAB1     <-- -->AHL20(2)       <---------MYB111(1)                      <---------DAG2 <---------AHL20(1)     --- ------->AHL20(2)  --------->MYB46(3)                      <---------ANAC58--------->AHL20(1)    <--- ---AHL20(2)       --------->AtMYB61<----------DOF2        <---------ANAC58<---------ARR11(3)  ------ --------AHL20(2)  --------->DEAR3(1)        <---------AHL20(2)   <-----------GT1--------->YAB1------   ttaaaaaaaataccacaaacaccaaccagttcagttttcttttctattttttttgggttttgctttttttactacaatatttttaatgattacaaaatta  1299300        --------->AHL20(2)        <---------AHL20(2)                                                                      <----       <---------WOX13(1)                                                                       <----    <---------YAB1                                                                              <----  ----------->GT1        --------->AHL20(1)                                               --------->AHL20(2) -------AHL20(2)         <---------AHL20(1)                                               <---------AHL20(1) ------>AHL20(2)   <---------STY1(2)                                                ----------->GT1 ------YAB1        --------->STY1(2)--------->AHL20(2)                           --------->ANAC46 --->YAB1<---------AHL20(2)         <---------AHL20(2)                    ------->TEIL    --------->AHL20(1) --->AHL20(2) <-----------GT1    ------->TEIL            --------->YAB1--------->ALFIN1   <---------AHL20(2)   taaattgtgattaattttactagctaatatatatgtatatatatacaaatgcaaacgaataaaaatttgaagggtgtatgtatacgtcgtaataaattgc  1299400                                                                                          --------->ARR14(2)                                                                                         ------>ZmHOX2a(1)                                                                                         <---------CCA1(2)                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                             <----------ID1         <---------GLK1(1)   ----------->GT1       <---------------------WRI1 <---------AtLEC2            --------->ANAC58  <-- -----AtLEC2             --------->At4g35610       <-------TEIL                 --------->AtLEC2  --- -----ANAC58        ----------->HVH21         <---------------------WRI1        --------->ANAC58<---- -----ANAC58  <---------TOE2(3)              <------ZmHOX2a(1)             ----------->HVH21    -----   atgagatgtaaatttagaggttgtgacagcgaaatagacaatagagaggacgatgcatgaaatgggacaacaagtgtttgacatgcaaatcctatcttct  1299500  Previous    Next  AGI:  At1g04650.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO71563.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72207.1) Range:  from: 1294892    to: 1299001    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version