Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ARR11(3)                      <---------ZAT14                                       --------->ARR11(3)                      --------->REM1(2)     --------->YAB1                 <---------MYB52(1)                      <---------ANAC46    <---------ATHB12             <---------LBD16                            <---------ANAC58  --------->WOX13(1)      <---------ARR14(2)                                <---------ANAC58 ----MYB46(3)         --------->At4g35610------>ZmHOX2a(2)            <---------At4g35610 -MYB46(1)        --------->ANAC58 --------->LBD16              <-------GAMYB --------->ALFIN1 -MYB83           --------->ANAC58 <---------At4g35610         <---------MYB46(3) -->MYB59       ---------->DOF2<-----------HVH21            ------------>AtMYB77                   --   ttagcaatcacattggtcaaaagcatcggaaactgtccggtgatcttaaacttgctcgatattagcggttgcatcagagcgtgtagagacacagccttga  1291700                              ---------->DOF2                        <---------ZAT14                        --------->ZAT14                       --------->ALFIN1                   --------->At4g35610          --------->ATHB12 ----------->HVH21 <---------At4g35610         <------ZmHOX2a(1)                 <------ZmHOX2a(2) <----------ID1    <---------ZAT14<---------ANAC58        <---------At4g35610   --------->ARR11(3) ------->ALFIN1    --------->ZAT14<---------ANAC58   --------->MYB59            <---------ARR11(3)   agtgcgacaaggagaagtttgagcagtgtagcaaaagcttgtctgaagaggagattaggcagatgaatacttctcttgagaagatcaaactattggaaaa  1291800               <----------DOF2            <---------ARR11(3)         --------->HSFC1(1)         --------->HSFB2a(2)                         <-----------GT1   --------->TOE2(3)         <---------HSFB2a(2)                       ----------->GT1  <<<<<<<<<<GT-3b             -----         <---------HSFC1(1)                       <---------------AtSPL8                        -----    <----------DOF2<-----------GT1                --------------->AtSPL8               ---------->DOF2   ctgaaacttttctagaccttttttccttcgaatttgacccctaagttttgaaattgtacaatctttgtatttttcttaattctgaaatacaaagggataa  1291900                         <---------ANAC58                                                         >>>                   --------->ICU4                                                                 ---                 ---------->DOF2                                            --------->ALFIN1      ---              --------->LBD16                                   --------->AHL20(2)        --------->ARR11(3)       <---------ICU4    <---------ANAC58                       <---------AHL20(2)        <---------ARR11(3)      <---------YAB1 <---------GLK1(2)                         --------->YAB1           ----------->ARR10 ---->ANAC58 --------->LBD16                          <-----------RAV1(1)   ----------->GT1--------->CCA1(2) ---->ANAC58<---------LBD16            --------->ATHB12        --------->AHL20(2)<------------CBF <--   gaaacagcatcattccctgaaaagattgtttgcgatttgaatcactgggtttttatatgttggaattaaaataagagggtgtgaattgttgagatatgtt  1292000               <---------ANAC46       <---------ANAC58       <---------ANAC58       ----------->GT1                                                         *TSS    --------->DAG2                             ---------->DOF2             <---------ICU4 >>>>ZML2      ----------->GT1               --------->ZAT18               <---------AHL20(2) ------>HSFC1(1)                  <---------TOE1(3)                     --------->YAB1 ------>HSFB2a(2)                --------->MYB52(1)                 <----------DOF2 -------HSFB2a(2)     <------------CBF <-------TEIL <---------MYB46(3)--------->AHL20(2)     <-------   ctagataaggcgtaattctgtgaaaattgaaaacttaagggtacaagtgcaaagtcgttgaattttgaagcttttaataaatccaaaatttctaatctgg  1292100                                         <---------ARR14(2)                                   <------ZmHOX2a(1)      ------>MYB83               <---------ANAC46                                        <---------ANAC58      ------>MYB46(1)          <---------MYB46(3)                               <-----------GT1    <---------MYB59           --------->ALFIN1              <---------ARR11(3)<----------DOF2  --------->GLK1(2)         <---------ANAC46       --------->At5g28300        <---------DAG2 --LBD16                   <---------DEAR3(1)     ----------->GT1 ---------->DOF2        <---------ANAC58   agagaacctatctctgaggtccaaactcttcggtggaggagaagaactgaaacggtaatctagctcttcaaagcctcttactttaccgattacttgctct  1292200                                                   --------->LBD16                                                  <---------ANAC58                                                  <---------ANAC58                                                  <---------ANAC46                                         --------->At5g28300                                       <---------TOE1(3)                                       <---------TOE2(3)                                        -----                                    --------->ARR14(2)                         --------->ANAC55(2)                                  <---------MYB46(3)                           <---------ANAC55(2)                                <-----------------AGL1                         <---------ANAC55(1) --                  --------->AHL20(2)<---------MYB52(1)        <----------DOF2  <---------ANAC46 -----                  <---------AHL20(2)<---------ARR14(2)  <----------DOF2  ------->TEIL        --------             <------ZmHOX2a(2)<-----------GT1   ------>ZmHOX2a(1)       <---------AtLEC2 --------->AHL20(2)   tgtaccatgtatacgatcatttatatgggtttttatcggttacggtaatcctccgtgtctttttctttgtgtatgcatgttaagtgttcgataaaatacc  1292300                                                             ------>ZmHOX2a(1)  <----------DOF2                                                             --------------->AGL15       --------->TOE2(1)                              <---------YAB1      <---------At4g35610       --------->TOE1(1)                          --------->ARR11(3)      --------->At4g35610   --------->ARR11(3)                             <---------GLK1(2)      --------->MYB52(2)       <-- ---->TOE2(3)                                 ------>ZmHOX2a(1)     <---------TOE1(3)    <---------AHL20(2) -------->DOF2                    <---------CCA1(2)<---------RVE1(1)<---------TOE2(3)    --------->AHL20(2) ---->TOE1(3)          --------->YAB1    <---------ZAT2      <---------------AGL15       --------->AHL20(1) ->RVE1(1)             --------->ATHB12------>ZmHOX2a(1)    <---------MYB59  ------>NtERF2   <-------   tcaaagacctggtaccaaaaactattcatagggtttgtatcctagctcctcagatttttattcctaattttaggtttgctgcctttggaaattttttgtt  1292400                                                                                 --------->TOE2(2)                                                        <---------ANAC46         <---------MYB59                                                        <---------ANAC58         --------->TOE2(3)                                                        <---------ANAC58      <-----------GT1                                         <---------ANAC58                ------>ZmHOX2a(1)                                         <---------ANAC46          --------->HSFC1(2)                                   <---------YAB1 ---------->DOF2  <---------HSFB2a(1)            ---          <----------DOF2          <---------TOE2(3)--------->DAG2 <---------HSFC1(2)            ---- -------ZAT6                  <---------ZAT6----------->GT1        --------->HSFB2a(1)       <------- ----RAV1(1)           <---------ATHB12  <---------ANAC58        <---------GLK1(2)     --------->MYB111(1)   gtgttagtcatgcttttagacccccatcagtagtattaagtttgtgtggaaaaaaaggtcgtgtttggaatcttcctatataacctaagtagttagagat  1292500                                               <---------HSFB2a(2)                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                         <---------ARR11(3)                                         <---------ARR14(2)         <---------ICU4                  --------->ARR11(3)         --------->YAB1                 <---------GLK1(1)         --------->ATHB51               --------->GLK1(1)        --------->ICU4           ================HOX2a_HOX2a        <---------ATHB51         =================HOX2a_HOX2a      --------->WOX13(1)         <------ZmHOX2a(1)   --------->TOE1(2) ------>DAG2                    --------->ANAC58    <---------HSFB2a(1) ------>DOF2                    --------->ANAC58  <<<<<<<ZML2                 <-----------HVH21 ----- --ZAT6 <---------ATHB12    --------->ALFIN1   --------->HSFB2a(2)  <---------ZAT2         <---------GLK1(1)   aaagtgatcaattatggagtctgtgttaatgtgcaggaaatgagatcccctagaaccttggaggtttggaagctaggcactgtcaactatttgaaatccc  1292600  Previous    Next  AGI:  At1g04635.1    Description:  EMB1687 (EMBRYO DEFECTIVE 1687); ribonuclease P. Identical to Probable ribonuclease P protein subunit 2 [Arabidopsis Thaliana] (GB:Q6AWV1;GB:O23021); similar to unnamed protein product [Vitis vinifera] (GB:CAO48546.1); contains InterPro domain Ribonuclease P-related; (InterPro:IPR002759) Range:  from: 1291313    to: 1291994    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g04640.1    Description:  LIP2 (LIPOYLTRANSFERASE 2). Identical to Octanoyltransferase (LIP2) [Arabidopsis Thaliana] (GB:Q9SXP7;GB:O23021); similar to lipoyltransferase (LIP2p) [Arabidopsis thaliana] (TAIR:AT4G31050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21992.1); contains InterPro domain Lipoate-protein ligase B; (InterPro:IPR000544); contains InterPro domain Biotin/lipoate A/B protein ligase; (InterPro:IPR004143) Range:  from: 1292079    to: 1293356    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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