Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ------>NtERF2                                                                         ------>NtERF2                       --------->MYB52(1)                                --------->RAP2.6(2)                      --------->ARR14(2)                                <---------ANAC46                      <---------ARR14(2)                               --------->ATERF1(1)                    --------->ANAC46                                  --------->LBD16                  <------NtERF2<---------MYB52(2)                   <---------LBD16                  ======================================================MADS_MADS        --------->ANAC58      --------->ANAC58                    <---------ARR14(2)        --------->ANAC46 --------->ANAC58               <---------ANAC55(2)    <---------ARR14(2) --- -------->KAN4(2) ----------------->AGL3                --------->ANAC55(2)    --------->ARR14(2) --- ------->HSFB2a(1)----------------->AGL2              <-----------------AGL1   --------->MYB52(1) --- --------HSFB2a(1)<-----------------AGL1              <-----------------AG<------NtERF2          <--- ---------TaMYB80 --------->At4g35610        --------->ZAT14      --------->ARR14(2)           ------ -----TEIL        ----------------->AGL1     <---------ZAT14     --------->GLK1(1)----------->HVH21 < --->TOE1(1)     ----------->RAV1(1)         <---------ZAT18     <----------TaMYB80           ------- -ZAT2  --------->ANAC58 --------->ANAC58    --------->ZAT18     <---------GLK1(1)<---------SPL7----- -->RAV1(2)---------->DOF2    --------->ANAC58      <------ZmHOX2a(1)--------->ANAC46         -------   tacattccccaagcaaaggcaccagaaacggcaaggaacatggccattgcactaggacccgtattggatatccggcgggcatatcggaccggtgcgaacc  1290900         ------>NtERF2       <---------ANAC58       <---------ANAC58       <---------ANAC46      --------->ATERF1(1)     <---------MYB46(3)     ------>NtERF2                     --------->ZAT6    --------->ALFIN1               ------>ZmHOX2a(1)    <---------DEAR3(1)         <---------ARR14(2)   <---------MYB52(1)          --------->ARR14(2)   <-----------HVH21          <---------CCA1(2)  --------->LBD16             <---------GLK1(1)                              <-----------HVH21 ----->P <------NtERF2        --------->GLK1(1)                              <-----------TGA1 --->MYB46(1)              <------NtERF2                           --------->YAB1 --->MYB83--------->SPL7<---------At4g35610--------->ANAC58       <---------YAB1 ------ALFIN1    ------>ZmHOX2a(1)--------->TOE2(3)    <---------ANAC58     --------->ANAC46 --->DEAR3(2) ------>MYB46(1)---------->TaMYB80        <---------ANAC46   ------>NtERF2  ------->GAMYB ---------LBD16----------->RAV1(2)--------->TOE1(3)    <---------ANAC58   <---------ATERF1(1) >TEIL<------NtERF2  <---------At4g35610   --------->ANAC58   <---------ANAC58   --------->At4g35610 ---->MYB46(3)------>MYB83--------->RAP2.6(2)       ------>ZmHOX2a(1)    --------->DEAR3(1) -->PCF2<---------SPL7  --------->At4g35610--------->ANAC46   <---------ANAC58<---------MYB52(1)<----   cacccggtggcggaccatcctgaagcagcggcatatccttcacactcgccattcctggcttatttcttatcatcgcctccgtcatcttcaacgctcaatt  1291000                                                                       <---------At4g35610                                                             <---------HSFB2a(2)                                                             >>>>>>>ZML2          --------->MYB52(1)         ------>MYB46(1)                                 --------->ZAT18        <---------MYB52(2)         ------>MYB83                                    <---------ZAT14      --------->MYB52(1)       <---------MYB59                      --------->At4g35610    --------->GLK1(2)                <  <---------HSFB2a(2)        <---------ARR14(2)        >>>>>>>>>TAC1   --------->At4g35610--------->TOE1(2)  --------->HSFB2a(2)        --------->ARR14(2)   <<<<<<<<<<GATA-1--------->GLK1(1)      <---------HSFB2a(1) -----ARR11(3)  <----------DOF2             <---------At4g35610   <---------GLK1(1)      --------->HSFB2a(1)   tcttctcgaccaaattgacttttgatcactgaatccgatttgattttgctgaaatcgagtgttctagggattccgatgaacaacgaagggaacgttggag  1291100                                             --------->ANAC46                                     ===                                             --------->ANAC55(2)                                  ===                                             <---------ANAC55(2)                                  ---                                            <---------LBD16                                 <--------           *TSS                            --------->MYB52(1)                              --------->CCA1(2)           <------ZmHOX2a(1)              <---------ATHB12--------->At4g35610             <---------ARR14(2) -----------GT1               <---------MYB52(1)   <---------ANAC46   <----------DOF2     --------->ARR14(2)   attaactaggctaggaccatataactaagcccattagttagcaaatcacggagtcgtatgagatgaaatgggctataactaagcccatttcagatatgtt  1291200                                      --------->bZIP60(2)                                      --------->TGA1a                                      --------->O2                                      --------->bZIP60(1)                                      <---------bZIP60(1)                                      <---------O2                                      <---------ANAC55(2)                                      <---------TGA1a                                      <---------ANAC46                                  <-----------HVH21                              --------->ALFIN1                             ------->MYC3                             <-------MYC2                             ------->MYC2                             <-------MYC3                             ------->PIF5                             <-------PIF5                            --------->TGA1a                            <---------ANAC55(2)                            <---------TGA1a                            --------->O2                            <---------O2                            <---------ANAC46                            <---------bZIP60(2)                         ----------->HVH21                        <-----------HVH21    --------->ARR11(3)                       --------->ANAC46      <---------ARR11(3)                       --------->ANAC58<-------MYC3                                               <--                   --------->ANAC58   --------->ANAC55(2)                                      ------          <-------TEIL --------->ANAC58------->MYC3 <<<<<<<<<TBF1           <---------MYB59    <----- ===============================================bZIP_DOF                 --------->ZAT18       <----- =====================================bZIP_DOF    XXXXXXXXXXXXXXXXXXXX>MIR838                 ------- ------->DOF2      --------->ANAC58 ------------->DYT1 <<<<<<<<<TBF1--------->AHL20(2)        ------- ---------------TaNAC69(2)  ====================bZIP_bZIP          ----------->TBP          <--------   caaagacccaagtccataagtaagcaagtcacgtggagtcacgtgattatcttcttcttcttcttacatataaaatgccctaactacatgttcagaatat  1291300        ------>NtERF2       --------->DREB2C(2)       ----------->HVH21       --------->RAP2.3(3)       --------->DEAR3(1)      --------->RAP2.3(1)      <------NtERF2      --------->ORA47(2)      --------->ATERF1(1)     <---------ATERF1(1)     ------>NtERF2     --------->At4g35610    --------->RAP2.6(2)    --------->DEAR3(1)    --------->RAP2.3(2)                                                                             -   --------->ERF1                                                                                   -   --------->MYB46(3)                                                                            ----   --------->ATERF1(1)             <-------TEIL                                                ------  <---------At4g35610             --------->CCA1(2)                                          <-------  --------->At4g35610             --------->GLK1(2)                                          ------>ZmHOX2a(2) --------DOF2                    --------->ARR14(2)                                         <------ZmHOX2a(2) --->ARR11(3)                    <---------ARR14(2)                                        --------->ARR14(2) ----ARR14(2)                    --------->ARR11(1)                                        <---------ARR14(2) ----ARR11(3)                   <---------HSFB2a(1)                <-------TEIL         <---------HSFB2a(2) -->CCA1(1)                    ----------->ARR10                  --------->CCA1(2)     --------->HSFB2a(2) -->RVE1(1)                   <------ZmHOX2a(1)                  --------->ARR14(2)    <------------- -GLK1(2)    *TSS --------->YAB1<---------GLK1(1)                <---------ARR14(2)    <---------LBD16   ctttagccgccgacttggtatcatcaaatcgaggagattcgaagaagcatggtgggatttaagaacagatacatgttaatggaagtttttctggatccgg  1291400         <---------HSFB2a(2)     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   <---------ARR11(3)   --------->ARR14(3)   <-----------ARR10   <---------ARR14(3)   --------->ARR11(3)                                         ---------->DOF2   --------->ARR14(2)                                        --------->YAB1   <---------ARR14(2)                                       <---------ATHB12 -------->ANAC58                                          --------->WOX13(1) -------->ANAC58               <---------ICU4          --------->ANAC58 ----->WRKY18(1)              <---------YAB1           --------->ANAC58    ------>ZmHOX2a(1)  <------ --->LBD16                 <------ZmHOX2a(2)         ---------->DOF2   --------->ARR14(2)    -------- --LBD16 --------->HSFB2a(2) --------->KAN4(2)    --------->HSFB2a(2)  <---------ARR11(3)    <------- ----AGL1<---------LBD16   <---------ATHB12       <---------HSFB2a(2)  <---------ARR14(2)   ---------   acaaggatcttctcggagaaggaacaccgatcattcttacacaattcaatctctcgaaagcaatcaaagacagtatcctcgtcaatttcggcgagtgtgg  1291500                                                     --------->CCA1(2)       <---------CCA1(2)                          ------->TEIL    <-------TEIL                               --------->ANAC46                                <----- ---AtMYB61                                  --------->YAB1        <------ZmHOX2a(2)           <----- ->ZAT14                                    <---------ATHB12      <---------ARR11(3)           <----- --ZAT14       <---------ARR14(2)         --------->WOX13(1)      ------------------------>ANAC81 >ALFIN1       --------->ARR14(2)     <---------ARR14(2)          --------->ARR11(3)          -------   tctaggttcgtctctcggttccttccaagtgaaatatgtgaatccaatcacgaagctatgcattgtaagatcatcaagagaagaacacagacaagtttgg  1291600                                       --------->ARR11(3)                      <---------ZAT14                                       <---------ARR11(3)                      --------->REM1(2)     --------->YAB1                 <---------MYB52(1)                      <---------ANAC58    <---------ATHB12             <---------LBD16                            <---------ANAC58  --------->WOX13(1)      <---------ARR14(2)                                <---------ANAC46 -MYB46(1)            --------->At4g35610------>ZmHOX2a(2)            <---------At4g35610 ----MYB46(3)     --------->ANAC58 --------->LBD16              <-------GAMYB --------->ALFIN1 -MYB83           --------->ANAC58 <---------At4g35610         <---------MYB46(3) -->MYB59       ---------->DOF2<-----------HVH21            ------------>AtMYB77                   --   ttagcaatcacattggtcaaaagcatcggaaactgtccggtgatcttaaacttgctcgatattagcggttgcatcagagcgtgtagagacacagccttga  1291700                              ---------->DOF2                        --------->ZAT14                        <---------ZAT14                       --------->ALFIN1                   --------->At4g35610          --------->ATHB12 <----------ID1    --------->ZAT14<---------ANAC58        <---------At4g35610    <------ZmHOX2a(2) ----------->HVH21 <---------ZAT14<---------ANAC58   --------->MYB59            --------->ARR11(3) ------->ALFIN1    <---------At4g35610         <------ZmHOX2a(1)                <---------ARR11(3)   agtgcgacaaggagaagtttgagcagtgtagcaaaagcttgtctgaagaggagattaggcagatgaatacttctcttgagaagatcaaactattggaaaa  1291800  Previous    Next  AGI:  At1g04630.1    Description:  MEE4 (maternal effect embryo arrest 4). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G33220.1); similar to unknown [Populus trichocarpa] (GB:ABK95941.1); contains InterPro domain GRIM-19 (InterPro:IPR009346) Range:  from: 1289733    to: 1291111    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g04635.1    Description:  EMB1687 (EMBRYO DEFECTIVE 1687); ribonuclease P. Identical to Probable ribonuclease P protein subunit 2 [Arabidopsis Thaliana] (GB:Q6AWV1;GB:O23021); similar to unnamed protein product [Vitis vinifera] (GB:CAO48546.1); contains InterPro domain Ribonuclease P-related; (InterPro:IPR002759) Range:  from: 1291313    to: 1291994    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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