Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     ------>ZmHOX2a(2)                                                --------->TOE2(3) --------->ARR11(3)                 <---------YAB1                  --------->AtMYB61 <---------ARR11(3)              <---------YAB1                    --------->ANAC46 ----YAB1                      --------->ZAT6   ---------->DOF2  <---------ALFIN1 ->YAB1     --------->YAB1----------->GT1  ----------->GT1   ---------->ID1   attgatcttcccaaatataacaaaaatgttgtaatactattattcaagttaaaagcctaatttgtctccacctaaacaatctcattttctaaacatatcg  1108300                          <---------GLK1(1)                          --------->GLK1(1)                   <-------TEIL                 <----------DOF2                            <---------ARR14(2)               <------ZmHOX2a(2)                            --------->ARR14(2)              <-----------ARR10                             <---------GLK1(2)              <---------ARR11(3)                         --------->YAB1              --------->ARR14(2)                      --------->WOX13(1)              --------->AGP1   <---------At4g35610   --------->MYB46(3)               ---------->DOF2              <---------AGP1   --------->ZAT2      ----------->RAV1(1)            --------->ANAC58              <---------ARR14(2)                   ------>MYB46(1)                --------->ANAC58              --------->ARR11(3)                --------->ANAC58                  ----------->GT1             <---------CCA1(2) --------->At4g35610 ------>MYB83              <----------ID1        --  <----------ID1------>ZmHOX2a(2)               --------->ANAC58        <---------ZAT14     <--------   caagagaacaaaatcagatctttctgagaaatcagctcaaatagaatgaaacccaacaatcagattcgaaagactgtagaagacaagtaaaaggaaacct  1108400                                                   ------>NtERF2                                                  <---------RAP2.6(2)                    ------>ZmHOX2a(2)         <---------At4g35610                  <---------ARR14(2)          --------->ZAT2                 <------ZmHOX2a(1)            <---------ZAT2            <----------DOF2                --------->HSFC1(2)     --------->ZAT14      ---------->DOF2    <---------ARR11(3)        <---------ANAC58        <---------ANAC58  <---------DEAR3(1)  --------->At4g35610        <---------ZAT6          <---------ANAC46 <---------LBD16      <---------At4g35610        <---------ANAC58        <---------ANAC58--------->ALFIN1      --------->ZAT2          -------        <---------ANAC46 <----------DOF2      --------->At4g35610     <---------ZAT2      <----------DOF2 -------->DOF2  <---------HSFC1(2)     <---------ZAT14    <---------TOE2(3)    --------->ARR11(3)<--- -GLK1(1)       <---------HSFB2a(1) <---------ANAC46  <----------DOF2------>NtERF2        <---------DAG2   gtaaagagtagcgttagaaggatcgagcttgatggcttgagtatagagagctgcggctttaagaaagttgccagctttgaagaactcatttcctttttcc  1108500                                                                                                  ---                                                                                                  ---                                                                                                  <--                                    <---------ANAC58       <---------HSFB2a(2)            <---------ARR14(2)                                <---------ANAC58           --------->HSFB2a(2)            ------->TEIL                            <---------MYB52(1)       <---------ICU4            ======================                          <---------MYB46(3)         --------->ATHB51      --------->ANAC58       <--     <---------GLK1(1)    --------->MYB52(2)        <---------MYB52(1)     --------->ANAC58       ===     --------->GLK1(1)--------->AtMYB61  <----------DOF2   <---------HSFC1(1)  ---------->DOF2  <---- --->ID1           --------->ANAC46 <---------ANAC58--------->ICU4       ============================ -------DOF2<---------At4g35610 <---------ANAC58------>NtERF2            ---------->DOF2  --------->ARR14(2)   tttagagatttctctgcttctccaccattcgttgccttgcctgctttctcggccattatttctagaggtttgtaagaaagccaaagaacatgaatccccc  1108600               --------------->AGL15               <---------------AGL15                                                           ======         <---------ANAC58                                                                      <-----         <---------ANAC58                                          <----------DOF2             <----- ------>O2<---------DAG2                                         ------>ZmHOX2a(1)          <-------- ------>TGA1a <-----------------AGL3                            ================================MADS_MADS -------O2<----------DOF2                                 --------------->AtSPL8        <---------YAB1 =======bZIP_DOF      <---------TOE2(3)                --------->ZAT14                  <---------AHL20(2) -------TGA1a ==================================================================MADS_MADS  <---------YAB1 ====================bZIP_DOF     <----------ID1       <---------At4g35610            <---------ICU4 -----ALFIN1  <-----------------AGL2                   <---------ZAT14          --------------->AGL15 =======bZIP_DOF      <---------TOE1(3)         <---------ALFIN1--------------->AGL15--------->ICU4   aagtgtgatttgcttttctattttagggtttacagagggacaagagacttccacttctgctctgttcctcttttagttttttctctaaatattattactt  1108700                                                                                     <---------YAB1                                              --------->YAB1                         --------->ICU4      <---------ICU4                      --------->AHL20(2)                        <---------TOE2(3)      --------->ATHB12            <---------AHL20(2)                               --------->MYB52(1)     <---------YAB1             <---------AHL20(2)                                 --------->YAB1 ===============================bZIP_DOF  <---------AHL20(2)                      <---------ATHB12 -----DOF2                    <---------CCA1(2)       <---------TOE2(3)   --------->DAG2   <---------TOE2(3) ----DAG2             --------->TGA1a --------->AHL20(2)                 ---------->DOF2   <---------YAB1 ---GT1       *TSS    <---------TGA1a <---------AHL20(2)   <------------CBF   ------------>CBF   tttgttcatcatttgagttctctcacttgtgcatatatttttaattaaacataactaagaatattgaacatatggaaaagcccaataacgattaagtttg  1108800                                                                                                <----                              <---------ICU4                                                   ------                              --------->ATHB12                                                 ------                              -------->ATHB1                                                   ------                             <---------YAB1                                                   <------                        --------->HSFC1(1)                                                    <------                        --------->HSFB2a(2)               --------->AHL20(2)                  -------                        <---------HSFC1(1)                <---------AHL20(2)                  -------                        >>>>>>>ZML2                   --------->AHL20(2)                    ---------                     --------->AGP1                 --------->ANAC58       ----------->GT1---------->DOF2           ------------>CBF--------->YAB1           --------->ANAC58<------NtERF2    --------->At5g28300    --------->ARR11(3)  <---------HSFB2a(2) ---------->DOF2<---------AHL20(2)       ----------->GT1--   aactaataccttgagcaatttcagttctagaatcattgaagaaatgaaaagcccaagaaaataaatgggcctcaaatttgtaaatacagtaaaaaagatt  1108900                       --------->DEAR3(1)                       ----------->HVH21                       ------->GAMYB                --------->DEAR4(1)                ------->GAMYB                --------->DREB2C(2)          --------->ANAC58          --------->ANAC58   --------->bZIP60(2)<---------MYB55(2)   <---------ALFIN1   --------->DEAR3(2) ----------->RAV1(1)  --------->MYB46(3) <---------ALFIN1  --------->MYB46(3) ---TEIL<---------ALFIN1--------->MYB52(1) --->GLK1(2)    --------->At1g77200 --->ARR14(1)   <---------ETT(1) --->CCA1(2)    --------->DEAR3(1) ---GLK1(2)    --------->MYB46(3) ---ARR14(2)   --------->DEAR3(2)        --------->MYB52(2) -->ARR11(1) <---------ALFIN1   ---------->DOF2                      <---------ANAC58        <------- -->ARR14(2)<---------ZAT14<---------MYB46(3)              <-----------GT1                 <---------MYB52(1) -->ARR10 --------->ANAC46<---------DEAR3(1) <---------STY1(2)       <---------ANAC58 --------->ARR14(2) ---->NtERF2--------->ZAT14<---------DEAR3(2)--------->STY1(2)       <---------ANAC46 <---------ARR14(2)   cggccacatcccactccaccgacaaccgacggttcaaagacggtagtagctagcatcaatttgactccatttcgtttgaattatcccaaatccattatct  1109000                                                                                                    -                                                                                              <<<<<<<                                                                                             <------MYB83                                                                                             <------MYB46(1)                                                                                          --------->ARR14(1)                             <---------AHL20(2)                                           --------->CCA1(2)                             --------->AHL20(2)                                          --------->ARR11(1)                             <---------ICU4                                              --------->ARR11(3)                             <--------ATHB1                                              <---------ARR11(3)                             --------->ATHB51                 <---------At4g35610        <---------ARR14(2)                            <---------YAB1                    --------->At4g35610        --------->ARR14(2)                          --------->YAB1                 --------->ANAC46              ----------->ARR10                         <---------AHL20(2)              --------->ANAC58        --------->DAG2    <-   <---------YAB1  ----------->GT1                       --------->ANAC58       ---------->DOF2    <- --ARR11(3)--------->ANAC46 --------->ICU4          <----------ID1<---------MYB52(1)   --------->ICU4   ctgtttttattccacgtagactagtaaataataatttcatttctctagtagaatagaacaagtcatctgttaacttcaaaaaaaaagtcaagatttggtt  1109100                                                                                                    -                                                                                             <-------                              <---------ARR11(3)                                           <---------ANAC58                       <---------AHL20(2)                                                  <---------ANAC58                      --------->AHL20(2)                                                   <---------ANAC46                     <---------YAB1                                                        <------MYB46(1)                    --------->AHL20(2)                        --------->DAG2              <---------AtMYB61                    --------->AHL20(1)           --------->TOE1(2)                        --------->MYB111(1)                  --------->ARR11(3)             --------->TOE2(2)                        --------->MYB111(2)                  --------->AHL20(1)            --------->ANAC58                          --------->MYB46(2) ---------->GT1   <---------AHL20(1)            ----------->GT1                           <---------MYB46(3) <<<MYB80    ----------->GT1  --------->ARR11(3)<---------ANAC55(2)               <---------YAB1    < --------TOE2(3)  <---------ARR11(3)            --------->ANAC58          --------->YAB1  --------->MYB55(2) --------TOE1(3)  --------->ICU4      ---------->DOF2        ---------->DOF2 <---------ICU4<------MYB83   tgaggttaatctatacagaaaatattatataagctcttgtaaaagagaaaacgtaagaacccataaagtattcgaatcatatttatgagagtttggtggg  1109200  Previous    Next  AGI:  At1g04190.1    Description:  tetratricopeptide repeat (TPR)-containing protein. similar to stress-inducible protein, putative [Arabidopsis thaliana] (TAIR:AT1G62740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71215.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 1106427    to: 1108714    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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