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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
MYB46(1)
--------->
AHL20(2)
<---------
WOX13(1)
<---------
AHL20(2)
--------->
ATHB12
<---------
AHL20(2)
<---------
MYB46(3)
--------->
AHL20(2)
<------
MYB46(1)
<<<
--------->
ANAC46
<---------
WOX13(1)
<<<
--------->
ANAC58
<-----------------
AG
<------
MYB83
<<<
--------->
ANAC58
--------->
ZAT18
--------->
ATHB12
<---
------>
MYB46(1)
<---------
ZAT18
<---------
MYB46(3)
<-----
------>
MYB83
<---------
AHL20(1)
--------->
MYB59
<---------
YAB1
<------
-----
GT1
--------->
YAB1
------>
ZmHOX2a(1)
--------->
DAG2
<------
MYB83
<-----------
GT1
aaataccaagccaaacacaatttaattcctatcgcactattttggtaaggtgattggtgattggtgaatgtgaattcaatactaaatgatgttacagatt
1073000
<----
<----
<-----
--------->
TOE2(3)
------>
MYB46(1)
--------->
TOE1(3)
------>
MYB83
<-----------------
AGL1
<---------
ALFIN1
---------
<<<<<<
SPL1
--------->
AtMYB61
--------->
MYB46(3)
<<<<<<
SPL4
--------->
DEAR3(1)
--------->
DEAR4(1)
<<<<<<
SPL5
--------->
MYB46(3)
--------->
ANAC55(2)
--------->
DEAR3(1)
------
SPL7
--------->
PCF2
<---------
ANAC55(2)
--------->
DREB2C(2)
----------
AtSPL3
<-----------
TCP11(1)
--------->
DAG2
<---------
MYB46(2)
---
GLK1(2)
--------->
MYB59
<---------
ALFIN1
---------->
DOF2
---------->
ID1
--------->
DEAR3(2)
gtacgggccaagttaggcccattgaatggcccaccaccttaaattcaactatggtactaagaaaagttctatcacttgtcgttttatttctcaccgacct
1073100
<---------
YAB1
<---------
AHL20(1)
------
DOF2
<----------
DOF2
<---------
MYB52(1)
--------->
AHL20(1)
-----
DAG2
<---------
DAG2
--------->
LBD16
<---------
AHL20(2)
<-------
----
DAG2
<-----------
HVH21
<----------
DOF2
--------->
AHL20(2)
========
>
ORA47(1)
<---------
ALFIN1
<---------
LBD16
<-----------
HVH21
<----------
ttttcttacattgtcccccgctctcacctttcctttagactccggtgtctcagtctcactgtcactggaatttattattcgactcagaaatttcacttta
1073200
<---------
AHL20(2)
----------->
GT1
<---------
TGA1a
<---------
ARR11(3)
--------->
ARR11(3)
--------->
RVE1(1)
<-------
TEIL
----
--------->
AHL20(2)
--------->
ANAC46
--------->
LBD16
---
DOF2
--------->
TGA1a
<-----------
GT1
--------->
ANAC58
<---------
LBD16
=====================
bZIP_DOF
--------->
YAB1
--------->
ANAC58
--------->
ATHB12
<---------
LBD16
-
GT1
--------->
CCA1(1)
--------->
PCF2
--------->
ARR14(2)
<---------
YAB1
<------
ZmHOX2a(2)
<-
aaaaaaaaaatctcatgtgtgttaaatttgggcccataatactctctcatatacacacaatcgaggctcatgatagctattgagatcaaaccgggacaat
1073300
--------->
ARR14(2)
<<<<<<<<<
TBF1
----------->
GT1
<<<<<<<<<
TBF1
<---------
DOF5.7(2)
<---------
ARR14(2)
--------->
HSFC1(2)
--------->
DOF5.7(2)
<---------
CCA1(2)
<---------
HSFC1(2)
--------->
ARR14(2)
<---------
MYB52(1)
<---------
HSFB2a(1)
------>
ZmHOX2a(1)
<---------
MYB52(1)
<------
ZmHOX2a(1)
--------->
HSFB2a(1)
-----------
----->
YAB1
<---------
ARR14(2)
--------->
MYB52(1)
--------->
ARR11(3)
<<<<<<<<<
TBF1
<--
--------
ZAT6
<-------
GAMYB
--------->
MYB52(1)
---------->
DOF2
<<<<<<<<<
TBF1
===========
agtattaaaccggtattcggttaacgagaggaaataaccggtatctgtccctctccctccaaagaactcgaagcttcttcttcttcttcttctcctgctt
1073400
---
----
-------
---------
------>
NtERF2
<--------
--------->
DEAR3(1)
<---------
ETT(1)
--------->
ORA47(2)
--------->
DEAR3(2)
<------
NtERF2
--------->
ZAT2
--------->
ATERF1(1)
--------->
At4g35610
--------->
RAP2.3(1)
<---------
ZAT2
<---------
ATERF1(1)
<---------
At4g35610
------>
NtERF2
<-----------
RAV1(1)
<---------
DEAR3(1)
<------
NtERF2
<---------
CCA1(2)
--------->
DEAR3(1)
<---------
ETT(2)
<----------
DOF2
--------->
ATERF1(1)
>
RAV1(2)
<---------
ANAC58
--------->
ATHB12
<---------
ATERF1(1)
---------
RAV1(1)
*
TSS
<---------
ANAC58
<---------
ATHB12
----------->
HVH21
=========
RAV
<-----------
GT1
<----------
DOF2
<---------
DEAR3(1)
<----
ctgtcgtcgtctaggttaatcgaat
atttcactatttgctttctatctttctgctgcgaatca
atggcgctatggatggacgctggagcgacgccgacca
1073500
------>
NtERF2
--------->
ANAC46
------->
GAMYB
--------->
DEAR3(1)
--------->
RAP2.6(2)
--------->
DREB2C(2)
--------->
MYB46(3)
--------->
DAG2
<---------
At5g28300
---------->
DOF2
--------->
MYB46(3)
------>
LBD16
<---------
At4g35610
----->
ANAC46
--------->
At4g35610
--------->
DEAR3(1)
<-
-->
MYB46(3)
------>
ZmHOX2a(2)
<---------
ARR14(2)
------->
TEIL
<---------
ANAC58
>
ORA47(1)
--------->
ARR11(3)
--------->
GLK1(2)
<---------------
AtSPL3
<--
-
ATERF1(1)
<---------
ARR14(2)
--------->
ARR14(2)
--------------->
AtSPL8
<---------
TOE1(2)
-----
LBD16
<---------
ARR11(3)
---------->
DOF2
---------->
DOF2
<---------
ANAC58
cggagaaggaaaaggctgatcttgaagctatttctgctctcaaagaatccaccgccatcgaattcaaa
gtacctctctcttctctggctcgttcgatttt
1073600
<---------
ICU4
--------->
DAG2
------->
TEIL
---------->
DOF2
<---------
REM1(1)
<---------
ATHB12
<----------
ID1
<
<---------
TOE2(3)
--------->
ICU4
----------->
GT1
---
--------
YAB1
--------->
ZAT18
---------->
DOF2
<----
-------
TOE2(3)
<----------
DOF2
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
<-----
gatgtttgatgtagtatcgatttcattcctttgctgtttaaacacag
gaagagggcaatgaatgtgtaaggaaagggaaaaagcattactctgaggcgat
1073700
--------->
ANAC58
--------->
ANAC58
---------->
DOF2
--------->
ANAC46
--------->
ANAC58
<---------
TOE2(2)
<---------
MYB46(3)
<---------
TOE1(2)
---
---------
WOX13(1)
<------
ZmHOX2a(2)
-----
------>
ATHB12
<-----------
HVH21
<---------
HSFB2a(2)
<----
-----
WOX13(1)
<---------
MYB52(1)
--------->
HSFC1(1)
--------->
ANAC58
--
GAMYB
--------->
ANAC58
--------->
GLK1(1)
--------->
HSFB2a(2)
--------->
ANAC58
tgattgttacacgaaagccattagtcagggagttctaagtgattcagagacctctattttgttctcgaatcgatcccatgttaatctactcttaggcaac
1073800
<---------
ALFIN1
----------->
HVH21
<---------
ZAT18
<---------
At4g35610
--------->
ZAT18
--------->
At4g35610
<---------
SPL7
<---------
TOE2(3)
--------->
ANAC58
<
<---------
ANAC58
<---------
ATHB12
<---------
TOE1(3)
<--
<---------
ANAC58
--------->
WOX13(1)
<---------
TOE2(3)
<----------
<---------
ANAC46
<------
ZmHOX2a(1)
--------->
DOF5.7(2)
<---------
SPL7
------>
MYB52(1)
<---------
TOE2(3)
--------->
TOE2(3)
<----------
DOF2
<-----
---->
MYB46(3)
<---------
At4g35610
--------->
TOE1(3)
<----------
DOF2
--------------
-----
MYB52(2)
--------->
At4g35610
------>
ZmHOX2a(1)
--------->
ANAC58
<-------
GAMYB
<-
tatcggcgtgccctcaccgatgctgaggaatcaatgaggttatctcctcataacgttaag
gtagtaagctaaactttctctttgatttcgttgtaccgtt
1073900
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AGI:
At1g04130.1
Description:
tetratricopeptide repeat (TPR)-containing protein. similar to serine/threonine protein phosphatase-related [Arabidopsis thaliana] (TAIR:AT1G56440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40532.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026)
Range:
from: 1073426
to: 1075567
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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