Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ARR14(2)          <---------At4g35610            <-------GAMYB    <-----------ARR10                   <---------MYB46(3)    <---------ARR11(3)                 --------->ALFIN1    --------->ARR14(2)               <---------ANAC46    --------->GLK1(2)             ------->GAMYB    <---------ARR14(2)            --------->DEAR3(1)                        <---------ANAC46    --------->ARR11(3)           --------->MYB46(3)                         <---------ANAC58 ----->At4g35610       <-------GAMYB --------->DEAR3(1)                     <---------ANAC58 ------At4g35610      --------->ALFIN1--------->LBD16                      <---------------AtSPL8 ------LBD16  --------->ARR14(2) --------->DEAR3(2)                        --------------->AtSPL8 ---ZAT14 <---------LBD16      --------->ARR14(2)                          <---------------AtSPL3 -->ZAT14 --------->At4g35610  <---------ARR14(2)               <---------PCF5               <------ZmHOX2a(1)   gcggagtatctcagcggaaacagtgtgttggcagaaccgccgtggttgcagtacatgagagaatggggaccaaaggttgtgtacgattcaagagaggaga  1059100                                 <---------TOE2(3)                                 <---------TOE1(3)                                        <---------ARR11(3)                              <---------MYB52(1)                                         <---------HSFC1(2)                             <-------GAMYB                                               --------->HSFB2a(1)                            <---------DEAR3(2)                                           --------->HSFC1(2)                            <---------MYB46(3)                                           <---------HSFB2a(1)                           <---------DEAR3(1)                                            <------MYB46(1)                         ------------>AtMYB77                                            <------MYB83                 <---------GLK1(1)                                                      --------->MYB59           <XXXXXXXXXXXXXXXXXXXXMIR2111A*                                     <---------LBD16 ------>ZmHOX2a(1)       <------MYB46(1)   <------ZmHOX2a(1)    ----------->RAV1(1)  --------->LBD16    <------ZmHOX2a(1)       ----------->GT1  ----------->HVH21<---------ANAC58        <---------LBD16--------->LBD16       <------MYB83   --------->LBD16    <---------ANAC58       --------->MYB52(1)<---------ANAC46 <-   tagagagattggtgaatcgatttccgaggacggttagggtttcgcttgccacagtgcttagaaaacttccggtggaattatccggcgaggaaggtcctac  1059200                                    <---------ARR11(3)              --------->ALFIN1        ---------   ---------->DOF2                  --------->ARR11(3)<---------MYB52(1)               ------>NtERF2 -----ZmHOX2a(1)--------->ATHB12---------->DOF2     <-----------RAV1(1)        <---------YAB1   aggaccaaaggagaagaacaattggtatggcgatgaaagatgttgaaattctcactgttgggaaacagatgtggtgagattaccatcggagccctaactg  1059300                              <---------ANAC46                             <---------LBD16                       --------->TOE2(3)                             --------->ZAT18                      ----------->GT1                           <---------WOX13(1)                    <---------TOE2(3)                  <                          <---------ANAC58                       <---------TOE1(3)                  -                <---------REM1(1)                               --------->MYB52(1)                  -         <---------TOE2(3)<---------ANAC58             <---------ANAC46                             <       ---------->DOF2<----------DOF2       <-----------GT1 <------ZmHOX2a(1)                      <-   --------------->AGL15 --------->ATHB12<---------ICU4<---------ANAC58                            <-   <---------------AGL15<---------YAB1  --------->AHL20(2)<---------TOE2(2)                        <-  <---------ANAC46 ------->TEIL--------->LBD16         <---------ANAC58                           <-- >MYB52(1)    --------->At4g35610       <---------AHL20(2)<---------TOE1(2)  ---------->ID1      ----   tgtaacttgtaaaggaagatgaagctttgattgcgcaagagattaattacacaattagcgtaggattaacgtaaaacttgtcgttagaagtgtatacaag  1059400                                                                     <---------ALFIN1                                                                     --------->ANAC58                                                                  <---------ZAT18                                                                  ------->GAMYB                                                                 --------->ANAC58                                                            --------->ANAC58                                                            --------->ANAC58                                                            --------->ANAC46         <---------ANAC55(2)                              ------>MYB83         --------->ANAC55(2)  ----------->GT1             ------>MYB46(1)      <---------ATHB12       --------->DAG2               --------->MYB52(1) <---------TCP15(1)         ---------->DOF2              --------->MYB55(1) --------->PCF2        --------->AHL20(2)               --------->MYB46(3)           --------->ARR14(2) -----------HVH21     --------->YAB1                    <---------MYB55(2)      ------->TEIL -------->TCP15(1)  --------->AHL20(2)                  <---------MYB52(2)    <---------ZAT14   <---- -------->TCP20     <---------AHL20(2)                  <---------MYB111(1) <---------------AtSPL3 ---------PCF2     <---------AHL20(2)                   <---------MYB46(2) <---------ANAC46     <---- -----MYB46(1) <---------AHL20(2)                       --------->AtMYB61  <---------ANAC58    ------ --------TCP15(2)  --------->YAB1                       <---------MYB111(2)<---------ANAC58   <------ -----MYB83 ------->TEIL --------->YAB1                --------->ANAC46   <-------TEIL     <--------- -------MYB46(3)   --------->AHL20(2)             --------->AtMYB61  --------->ANAC58<---------ARR14(2) ----->ALFIN1  --------->AHL20(2)            --------->MYB46(3)  --------->ANAC58   <---------MYB52(1)   tgggtcccatcatgtatttaattaaaataataaagttatatagacgaacaaacctccaccaaacgcaacgcacacattcgtgtaccgtttccgatttttc  1059500     *TSS   ------------>CBF                                                         --------->ICU4  ------>ZmHOX2a(1)                                                         <---------YAB1 -----ANAC58                         <---------ANAC58            <------NtERF2 -----ANAC58                         <---------ANAC58         --------->ATERF1(1) --------->AtSPL8                    <---------ANAC46  --------->GLK1(2)  --------->YAB1 -----GT1                  <---------TOE2(3)       --------->LBD16       <---------ATHB12 -DOF2                 <----------DOF2           ------>ZmHOX2a(2)--------->DEAR3(1)   gttcctccaatttcattctctctctctttaagaaaaattccttgtttttgatccgagaatcgaagtcgccctcgaatcaagattaaaacctcgtttagtt  1059600                       <---------ANAC58                       <---------ANAC58                    --------->LBD16                   <---------ANAC58                   <---------ANAC46                   <---------ANAC58                  ------>ZmHOX2a(2)                  <-----------------------TaNAC69(2)                 <------ZmHOX2a(2)                <---------ARR14(2)                --------->ARR14(2)                --------->TCP20                                   --------->GLK1(2)           <---------ANAC46                           <---------HSFB2a(2)                    <-------         --------->ZAT14    <---------bZIP60(1)       --------->HSFB2a(2)   --------->ALFIN1---------         <---------ZAT14 ----------->HVH21     <-----------GT1   <---------GLK1(2)       <-----------GT1   ctcaatttcagttctgtggatccgtgcgtgacctcaagttttttttttttttctgtctcgaaattcagaatcgtagaggtgttgaaagttgaaacctttt  1059700                                                                                       <---------MYB52(1)       <---------AtLEC2                                                      <---------ANAC46       <---------ANAC46                 --------->ATHB12                   <----------DOF2       <---------ANAC58                <---------ATHB51                   <---------ANAC58       <---------ANAC58                <---------YAB1                     <---------ANAC58 ---DOF2  <------MYB83              ------>ZmHOX2a(2)              <---------ZAT18<---------ARR14(2) >TOE2(3) <------MYB46(1)          <---------WOX13(1)             <---------ZAT6  --------->ARR14(2)   ttttggtttgcttggttaatgggtttcttcaaacttgatcgataattggatttgaatcaagggttttagtgttcttgctttgtgtattcgtttggcaatt  1059800                                          <---------DEAR3(2)                                          <------MYB83                                          <------MYB46(1)                                         <---------MYB46(3)                                         <---------DEAR3(1)                                         --------->MYB46(2)                                       ---                                         --------->MYB55(2)                               <----------                                         <---------DEAR4(1)                             <-------TEIL                                        <---------ORA47(1)                        --------->LBD16 <--                                      <------MYB83                                ------>NtERF2  <---                                      <------MYB46(1)        --------->ZAT2       <------NtERF2<-----                                     <---------MYB46(3)      <---------At4g35610 --------->RAP2.6(2)                                    --------->ALFIN1         ----------->RAV1(2) --------->RAP2.3(2)                                  <---------TGA1a        --------->MYB52(1)      --------->DEAR3(1)                                  --------->TGA1a        -------->P           --------->ANAC46 <-----                                  <---------O2     ------>ZmHOX2a(2)        =========================                                  ================================MYC_MYB   ---------->DOF2 <--------      --------->ATHB12        <-----------HVH21 --------->ATHB12     <----------ID1<---------ALFIN1     <---------YAB1      <---------MYB46(3)    <---------YAB1<---------ZAT2--------->ARR14(2) <------NtERF2  --------->ICU4<---------AtLEC2  --------->O2 --------->ICU4--------->At4g35610--------->RAP2.3(1) <   tgggataatgaatggtttgcaagaagtttgttcgtcaagtgggtcggtgatgatcggactaccagctgaagaagacgaaaacgccgcacattcgtcggag  1059900              <---------TGA1a              --------->O2                                                   <-------TEIL           ----------->HVH21                                              <------MYB83 ------>ARR14(2)                                                          <---------HSFC1(2) -HVH21    --------->DEAR3(1)                                             <------MYB46(1) ---------->ID1 -------ARR14(2)       <-----------HVH21       <----------DOF2            --------->HSFB2a(1) ---ZmHOX2a(1)--------->TGA1a               ------>MYB46(1)               --------->HSFC1(2) ----TOE1(2)  <---------O2                  ------>MYB83                  <---------HSFB2a(1)   ----- ----TOE2(2)  ============================================bZIP_DOF  <------NtERF2 ------>ZmHOX2a(2) =======================bZIP_DOF          <---------MYB59         <---------DEAR3(1)  --------------- -DEAR3(1)--------->DEAR3(2)       --------->ZAT2                 <---------MYB46(3)  <----------DOF2 -------TEIL------>NtERF2          <---------ZAT2             <---------AtMYB61   ===================   gattcatcttgccccgacgagtcagtgtcagagacagagctcgacctagctttgggtcttagcattggtcgtcggaaggttcgatcgtctttgtcttcct  1060000  Previous    Next  AGI:  At1g04090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18490.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43950.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G04350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61465.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40557.1); contains InterPro domain Protein of unknown function DUF946, plant (InterPro:IPR009291) Range:  from: 1057150    to: 1059418    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g04100.1    Description:  IAA10 (indoleacetic acid-induced protein 10); transcription factor. Identical to Auxin-responsive protein IAA10 (IAA10) [Arabidopsis Thaliana] (GB:Q38828); similar to IAA11 (indoleacetic acid-induced protein 11) [Arabidopsis thaliana] (TAIR:AT4G28640.2); similar to IAA11 (indoleacetic acid-induced protein 11), transcription factor [Arabidopsis thaliana] (TAIR:AT4G28640.1); similar to aux/IAA protein [Populus tremula x Populus tremuloides] (GB:CAC84709.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 1059505    to: 1061190    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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