Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->HSFB2a(2)                                                         <---------HSFB2a(2)                                                     --------->ARR14(2)                                                    <---------GLK1(1)                                                   <---------ANAC58                                                   <---------ANAC58                                                  <------NtERF2                                                --------->ALFIN1                                               <---------MYB52(1)                                            --------->SPL7                                           --------->MYB52(1)                                           ------>MYB83  --------->LBD16                                           -------->P<---------ARR14(2)                                           ------>MYB46(1)                                          --------->ORA47(1)                                          --------->MYB55(1)                                          <---------SPL7<---------ANAC46                                         --------->MYB46(3)                                         ----------->HVH21                    --------->GLK1(2)                                         <---------MYB52(2)                   <---------ARR11(3)  <---------LBD16         <----------DOF2<---------MYB55(2)            --------->At4g35610 ----->ZmHOX2a(2)      <-----------GT1   --------->DEAR4(1)            <---------At4g35610 -------->ETT(2)   <---------TOE2(3)     --------->DEAR3(1)         ----------->RAV1(2) -----YAB1<---------TOE2(3)              --------->DREB2C(2)      --------->ANAC58 -->CCA1(2)       ---------->DOF2        <---------MYB46(2)       --------->ANAC58                 -- >YAB1    <---------TOE1(3)             --------->DEAR3(2)   ----------->ARR10--------->ARR11(3)   <-   gatcgacggattagggtttctaaagttactttagagcatcgcaccgaccggtggggttccgagaagactcgcctgctcaaaatctatctcgcctaatcga  1050900                                                                   --------->ATERF1(1)                                                                   <------NtERF2                                                                  <---------ATERF1(1)                                                                  ------>NtERF2                                                                 --------->RAP2.6(2)                                                                 --------->RRTF1(3)                                                                 --------->RAP2.3(2)                                                                 --------->DEAR3(1)                                                                 --------->RAP2.3(3)                                                                --------->ORA47(2)                                                               ------>NtERF2                                                               <---------ATERF1(1)                                                              --------->ANAC58                                                              --------->ANAC46                                                            <---------ALFIN1                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                                        --------->GLK1(1)                                   --------->YAB1    --------->LBD16<----------DOF2                                  --------->ICU4    --------->ATERF1(2)      --------->ABI4(2)                                 --------->ANAC58   <---------ATERF1(2)      <---------ZAT18                                 --------->ANAC58   --------->TOE1(2)    --------->LBD16                            --------->ANAC58       --------->DEAR3(2)   <---------LBD16             -                     ---------->DOF2              --------->MYB52(1)--------->DEAR3(1)              <           --------->ZAT6   --------->ANAC46      --------->SPL7--------->DEAR4(2)                  <        <---------ALFIN1    --------->ANAC58    <---------SPL7--------->O2--------->LBD16      ------ ------>ZmHOX2a(2) <------ZmHOX2a(2)           --------->TOE1(1)--------->ERF1                 ------ ------->ARR11(3) <---------ARR11(3)           --------->TOE2(1)--------->RAP2.3(1)      <---------GLK1(2) --------ARR11(3) --------->ARR11(3)       <---------HSFC1(2) --------->ANAC58   <----------DOF2    -   tgatcttgctccaactctaagatcaaaggcacggcaaggatgagaaacgtcgtaccggcgatccacgccgccttcccggtgctctttaacagcttcttcg  1051000                                                                                            <------NtERF2                                                                                           ------>NtERF2                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                         <---------ZAT2                                                                                         --------->ATERF1(1)                                                                                         <------NtERF2                                                                                         --------->ZAT2                     <---------ANAC58                                                   <---------ATERF1(1)                     <---------ANAC58                                                   <---------DEAR3(2)                     <---------ANAC46                                                   ------>NtERF2                    --------->ATERF1(1)                                                 <---------RAP2.3(1)        <------NtERF2--------->DEAR3(1)                                                <---------RAP2.3(3)      --------->ANAC46 <------NtERF2                                                   <---------DEAR3(1)      --------->ANAC58------>NtERF2                                                    <---------ATERF1(2)      --------->ANAC58--------->ABI4(2)                             <---------ARR11(3) <---------RAP2.6(2)     --------->RAP2.6(3)                                            <---------GLK1(2)  <---------RAP2.3(2) -------->ANAC58    <------NtERF2                            --------->ANAC46          --------->ATERF1(2) ---------O2       <---------RAP2.3(1)                   <---------HSFB2a(1)          <---------LBD16 ---------ANAC55(2)<---------DEAR4(2)                   --------->ARR11(3)        <----------DOF2 ----->HVH21      <---------DEAR3(1)                    <---------ARR11(3)       <---------DAG2 --->ANAC46<------NtERF2        --------->LBD16   --------------------->WRI1--------->ARR14(2) <----- -------->ANAC58  <---------RAP2.3(2)           <---------TOE1(2) ----------->ARR10   --------->RAP2.6(3)   acacgtagacggcatcgcaagcggcgcgtcttccctgagaaacgatatcgtagtttgaaatcttcgccaagatgctcgaatcgcctttgccggctccgat  1051100                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                        <------------CBF                                                                                      <---------AHL20(2)               <---------WOX13(1)                                                    *TSS         <--        <------NtERF2                                                                <---------AHL20(1)       ------>NtERF2                                                                 --------->AHL20(1)      --------->ANAC46  <<<<<<<<<<GATA-1                                             <---------AHL20(2)      --------->RAP2.6(2)                --------->DAG2      ------>NtERF2 <----------DOF2  --------- ----GLK1(2) --------->ATHB12           ---------->DOF2     --------->DEAR3(1)       --------->AHL20(2)   tttcttaggcgccattgattgaatgaaatcgagagagattgaaaaagttcagactagagacgacgacgagggtttcactttgaaaaataaaattgaaagg  1051200                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                             --------                                                                                             ------>NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------              <---------ICU4                                                               --------->ORA47(2)           --------->YAB1                                                                  <------NtERF2   <---------LBD16                                                                         --------->ATERF1(1)   ------>ZmHOX2a(1)                                                                       --------->RAP2.3(1) ------>ZmHOX2a(2)                                                                         --------->DEAR3(2) ------ZmHOX2a(2)                                                                         <---------At4g35610 ------->ARR14(3)                                                                         <---------ATERF1(1) --------ARR14(2)                                                                       <---------ZAT14 ------->ARR14(2)                                                        <------------CBF <---------RAP2.3(1) --------ARR14(3)  ------->TEIL                                       <-----------RAV1(2) --------->At4g35610 ------->ARR11(3)  <---------LBD16                                ------->GAMYB         --------->ZAT18 --------ARR11(3)<---------SPL7                                --------->MYB52(1)      --------->ALFIN1 ------>GLK1(1)<---------------AtSPL3                       --------->ANAC55(2)       <---------ZAT18 -------GLK1(1)<---------------AtSPL8  <---------TOE2(3)  <---------AHL20(2)          --------->ZAT14 ->DOF2 <----------DOF2<-----------HVH21  --------->GLK1(1) <---------ANAC55(2)      --------->ALFIN1   ggatcctcggctttaataatgtacgggtcagtaggcccattaagaaatctaatgacccatttacttaacgggccagattgagttccagtgtgcgccgacc  1051300         <-----------HVH21      --------->ANAC55(2)      <---------ANAC55(2)    --------->CCA1(2)   <---------ARR14(2)   --------->ARR14(2) --------->ANAC58 --------->ANAC46 --------->ANAC58 --->MYB83        <---------ANAC58 --->MYB46(1)  <----------DOF2 ----->P <---------ATERF1(1) ------->RAV1(1)  <---------ANAC58 ---->AtMYB61 <----------DOF2                                <---------ANAC46 --->MYB46(3) <---------DAG2                               <---------ANAC46 --------->ANAC46 ->ORA47(1)  <------NtERF2                                 <---------ANAC58 --------->ANAC58 >RAP2.3(3) ------>NtERF2                           <---------ALFIN1      <---------ALFIN1       ---- >DEAR4(1)--------->ATERF1(1)             *TSS   --------->ANAC46    --------->ANAC58     --------->At4g35610 >DREB2C(2)--------->DEAR3(1) ---------->ID1--------->ARR14(2)       --------->ANAC58  ---------->DOF2 >DEAR3(1)<------NtERF2     --------->MYB52(2) --------->ANAC46      --------->ANAC46--------->YAB1 -ETT(1)--------->ANAC46   <-------TEIL --------->ZAT6     <---------ANAC58 --------->ANAC58     <---   aacacgatacgcgtcgcctttcgttttggttcgtcgtctctaaccctatacccccctctcttcgtgtgtaaacgaaacacaccaaaatcaaaagctgaga  1051400                                                                                                 ----                                                                                                 <---                                                                                             --------                                                      <---------HSFC1(1)                     <-------                                                      --------->HSFC1(1)                    <--------                                                      >>>>>>>ZML2                           <--------                                             ---------->DOF2                              -----------                                          <------MYB83--------->HSFB2a(2)           --------->LBD16                                          <------MYB46(1)                          --------->LBD16             <---------At4g35610          ----------->GT1   <----------ID1        <---------HSFB2a(2) ----->At4g35610                        <---------WOX13(1)  ----------->HVH21     --------->HSFB2a(2) ------At4g35610  <----------DOF2     --------->ATHB12<---------HSFB2a(2) <----------DOF2<-------TEIL   gctctcttacattgaagctactttcgaagatagcattcactgattggtaaagagttctagaagcgacgagcatcttctttagttcccgaggtacatatcc  1051500                                                                                                  ---                                                            <---------ARR14(2)                   ----     <---------CCA1(2)                                      --------->ARR14(2)                  ----- -->ZmHOX2a(1)                                             --------->GLK1(1)            <---------ARR11(3) -------DOF2                                           <---------ANAC46                 --------->ARR11(3) ->ARR14(2)                                <---------At4g35610                          <---------GLK1(2) --ARR14(2)                                --------->At4g35610    <----------DOF2  <---------ANAC46 -GLK1(1)                              --------->TOE2(3)   <---------GLK1(1)    <---------AtMYB61<--- -CCA1(2)                           <-----------GT1    --------->ETT(1)       <---------MYB46(3)----- ------------>TaNAC69(2)      <---------TOE2(3)     <-----------RAV1(1)     <-------GAMYB      ------   ttttctcgtctctacgaattgggaacaaaactagggttttacattagctcatttttgtcgggtttctgcttttgtttcggttgtggtttagatttttgtc  1051600        --------->HSFB2a(1)                                               --------->TOE2(3)        --------->HSFC1(2)                                                --------->YAB1        <----        <---------HSFB2a(1)                                        --------->ANAC46             -----        <---------HSFC1(2) ------>ZmHOX2a(1)                       --------->ANAC58         <-------- --->ZmHOX2a(1)  --------->YAB1                                <----------DOF2            --------->AHL20(2) ----------->AGL15    <----------DOF2                          <---------DAG2             <---------AHL20(2) ------------>AGL1   <---------ANAC58      <------ZmHOX2a(1)  <---------ANAC58    <---------ANAC58 ------------AGL15   <---------ANAC58 --------->ATHB12        <---------ANAC58    <---------ANAC46  - ------------>AGL2 <---------YAB1    <-------TEIL           <-----------GT1       <---------ANAC58  - ---->ID1     <---------CCA1(2)  <---------YAB1    ----------->GT1 --------->ANAC58      --------->AHL20(2)   ctattgtagaaacttcgtatcatgctttcctggttgtgattcataggaagatagagtgaattttgctttacgctaatcttatttgcttgcatttaatgaa  1051700                                                                                            --------- ------>ZmHOX2a(1)                                                                       <---------HSFB2a(2) -----GLK1(1)                                                                            >>>>>>>ZML2 ---->GLK1(1)                                                                            --------->HSFB2a(2) -TOE2(3)  <---------ZAT14                                                               <---------HSFC1(1) -------->TOE2(2)                        <---------GLK1(2)                               --------->HSFC1(1) -------->TOE1(2)               <----------DOF2                             <---------HSFB2a(2)   atccttcgatgagtttagtatcagtcttctgtgtctttaaactgattctgttcttatgtgaatgtagttttctgcgtttgagaagtctgttctagaaagt  1051800  Previous    Next  AGI:  At1g04070.1    Description:  TOM22-I (translocase of the outer mitochondrial membrane 22-I). Identical to Mitochondrial import receptor subunit TOM22 homolog 1 (TOM22-1) [Arabidopsis Thaliana] (GB:O64497); similar to TOM22-V (TRANSLOCASE OUTER MITOCHONDRIAL MEMBRANE 22-V) [Arabidopsis thaliana] (TAIR:AT5G43970.1); similar to unknown [Populus trichocarpa] (GB:ABK94405.1); contains InterPro domain Mitochondrial import receptor, TOM9-2 subunit, plant (InterPro:IPR017411) Range:  from: 1050552    to: 1051185    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g04080.1    Description:  PRP39; binding. similar to AT PRP39-2 [Arabidopsis thaliana] (TAIR:AT5G46400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60862.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40560.1); similar to Os03g0210400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049340.1); contains InterPro domain RNA-processing protein, HAT helix; (InterPro:IPR003107); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990) Range:  from: 1051342    to: 1056750    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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