Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ZAT2                <---------ZAT2                      <-----------HVH21                --------->At4g35610            <---------At4g35610                <---------At4g35610         <-------TEIL              <-----------RAV1(2)         <---------ARR14(2)                            --------->O2            <-----------HVH21             --------->ARR14(2)                            <---------O2          ------>NtERF2                   <---------GLK1(2) --------->WRKY38(1)       --------->CCA1(2)         --------->DEAR3(1)       --------->ZAT14   <-----------TGA1       <---------ATHB12         -   ggaaacactcgccgagtcagctgttttatatgactctaaactcagattcagaagcgtcactgttgactaatgaacgaatcaataagagagacgagacatg  1035800                                                                                         <---------ANAC46                                                                                 --------->TOE2(3)                                                                               ------->TEIL                                                                            --------->ANAC46                                            ----------->RAV1(1)             --------->ANAC58                                           --------->DREB2C(2)              --------->ANAC58                                           --------->At1g77200              --------->ANAC55(2)                                           ----------->HVH21                <---------ANAC55(2)                                           ------->GAMYB                   <---------LBD16                                          --------->DEAR3(2)              --------->MYB52(1)                                  ----------->HVH21                      <------ZmHOX2a(2)                                <---------ANAC55(2)    <------ZmHOX2a(1)--------->ARR11(3)               <---------ANAC46 --------->ANAC55(2)    =========================HOX2a_HOX2a -------->ATHB12     <---------GLK1(1) ----------->HVH21                <---------ARR11(3)        <--   cttcattgctatatttcgcttggaattcatcaacaagtgactcgaccgacagaataaggagcgaaggaaatgaagatcacggaccttagtggtgtctagc  1035900                                                                                         --------->YAB1                                                                                        --------->ICU4                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC46                                                                                  <---------LBD16                                                                               <---------ARR14(2)                                                                          --------->ANAC58    <------                                                                       <---------DEAR3(1)<---------ICU4                                                                <---------At4g35610--------->ANAC55(2)                                                                <---------ZAT2<---------GLK1(1)                                                                --------->ZAT2--------->GLK1(1)          <---------At4g35610                           --------->ANAC58  --------->ANAC46   --------       --------->ETT(2)                                 --------->ANAC58  --------->ANAC58 <---------YAB1      --------->ALFIN1                                <---------ALFIN1 --------->DEAR3(1)--------->ATHB12     <-----------HVH21         --------->ALFIN1   ------>ZmHOX2a(2)  <-----------HVH21  <---------YAB1 <---------TOE2(1)           <---------ANAC46   --------->ARR14(2)  <---------ANAC46--------->LBD16 <---------TOE1(1)         ------->GAMYB        <---------ARR14(2) <-------TEIL--------->ARR14(2)   < -------SPL7            --------->MYB52(1)--------->WRKY18(1)   --------->At4g35610--------->LBD16---   catacgaggtcgagcggattgaagtccaacggagtgtatggacagtcaaggatcgaccacgctcgtagctgcgtcgacgcaaatcccggaatgattatac  1036000                                                       ------>NtERF2                                                    ------>NtERF2                                                 --------->SPL7                                                 --------->RAP2.6(3)                                                --------->ARR14(2)                                                <---------ARR14(2)                                               <---------ZAT2                                               --------->ZAT2                                            <---------ZAT14                                            --------->ZAT14       ----------->GT1                   --------->At5g28300      --------->LBD16       --------->ANAC58                   --------->LBD16         --------->DEAR3(1)     --------->ANAC58    --------->At5g28300        <---------HSFB2a(2)               --------->ANAC46     <---------ATHB12     <---------ANAC46        --------->HSFB2a(2)             <---------ALFIN1<------NtERF2               <---------DEAR3(1) -----GT1        <------NtERF2          --------->AtMYB61 --------->LBD16        ----------->TGA1 ->KAN4(2)     <---------DEAR3(1)      --------->MYB46(3)--------->DEAR3(1)      ----------->HVH21 <- ---------MYB52(1)<---------ANAC46    ------>ZmHOX2a(1)<---------ATERF1(1)    <---------DEAR3(1)  <-- ------>ANAC46--------->ATERF1(1)    --------->ANAC46 <---------ALFIN1   --------->MYB52(1)   -------   ccgatagcttcgagtagtcgccgtgaaactcggtctcatcctccaccgcagttcggccaccgcaaatcaagaaaaaaacggcgatgacggtgaaggaagc  1036100            <---------ARR14(2)                                                                    <--            --------->ARR14(2)              <----------DOF2           --------->DAG2              --- --------MYB52(1)                           <---------DAG2           ---------->DOF2              <-- -------RAP2.6(3)                       <---------MYB111(1)        <------ZmHOX2a(1)            ----- ----->MYB.PH3(1)           <---------DEAR3(1)                  <------ZmHOX2a(1)  <------ZmHOX2a(1)   cgttactgatttcgaattcgctcccatcgctcggtgtctctaactacttttcatcgccagagtttaggaggaaaagtaagagagaggagagagagagagt  1036200                                                                                 --------->TOE1(2)                                                                                --------->HSFC1(2)                                                        <----------DOF2         --------->HSFB2a(1)     <---------MYB46(3)                             ------>ZmHOX2a(1)           <---------HSFB2a(1)   <-------GAMYB                                   <---------MYB59              <---------HSFC1(2)  <---------ANAC58                              --------->ZAT18                ------->TEIL  <---------ANAC58                            <---------HSFC1(2)              <---------ARR11(3) --------->ZAT18                              <---------HSFB2a(1)           --------->ANAC58 -------ANAC58                                --------->HSFC1(2)            --------->ANAC58 ------>ALFIN1                                --------->HSFB2a(1)    --------------->AGL15    <------ -------ANAC58                           --------->HSFB2a(2)         <---------------AGL15    ------- ---->ALFIN1                        *TSS <---------HSFB2a(2)      <-----------GT1--------->TOE2(2) --   gtgtgcgttgttggggaccttgaaggtgagagttgaaaagtttttggaagcgtcctaactttccaaatatacccttacaagaaccttcgaagtcatcgag  1036300                         --------->MYB46(3)                    ----------->GT1                 ================================bZIP_DOF                 --------->bZIP60(1)                 --------->ANAC46                 --------->ANAC55(2)                 ================================bZIP_DOF                 <---------bZIP60(1)                 <---------ANAC55(2)                                                                -                 --------->TGA1a          --------->ATHB12                                    -------                 --------->O2            <---------YAB1                                   --------->MYB46(3)      --------->ZAT14    <---------MYB52(2)        <----------DOF2                   <---------ANAC58 ---HSFB2a(2)    <---------O2            <---------AHL20(2)            --------->ATHB51   <---------MYB52(2) -->HSFB2a(2)<-----------HVH21           --------->AHL20(2)            <---------ICU4<---------ANAC58 --------->GT1   <---------TGA1a      <----------DOF2        ---------->DOF2         --------->ANAC55(2)   aaggttactactctctatcacgtcgtaacaaacaaatgggcttttaattgggcctttgaaattgaaagttgaataatttcaaaattttcgtaacaaacaa  1036400                                                                                  -------->ABF1                                                                                  <-------MYC4                                                                                  ------->MYC4                                                           ------>NtERF2          <-------MYC3                                                           --------->LBD16        ------->MYC3                                                          --------->ANAC58        <-------MYC2                                                          --------->ANAC46        ------->MYC2                                                          --------->ANAC58       <---------TGA1a                                                   <---------ARR14(2)            --------->O2                                                   <-----------ARR10             --------->TGA1a                                               --------->LBD16                   ====================                                               ------>NtERF2                     --------->ANAC55(2)                                              --------->DEAR3(1)                 --------->ANAC46  <---------ANAC46                            --------->ANAC46                   <---------ANAC55(2)  <---------ANAC58                 --------->YAB1  --------->ARR14(2)            <---------O2  <---------ANAC58     --------->LBD16--------->AHL20(2) <---------LBD16    <---------SPL7          - ----->NtERF2     <-----------GT1 <---------ATHB12<---------CCA1(2)  --------->ARR11(3)           --- --->DOF2 <-----------GT1<----------DOF2     <---------LBD16         <---------ARR11(3)     <--------   gcgggcgtttattcacattttctcccgcttaatcaaatcataaaatccccgcctatcttcccgccatttgatatctatcgtacacgtgtctctaaattct  1036500                                                                                    --------->CCA1(2)                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR11(3)                                                                                   --------->AGP1                                                                                   --------->ARR14(2)           ------>MYB83                                                            <---------AGP1----        ------------>CBF      --------->ANAC58                                     <---------ARR11(3)      <-----------GT1         --------->ANAC58                                     <---------ARR14(2)  --------->AHL20(2)      --------->ANAC58                                       ----------->ARR10 ========bZIP_DOF--------->ANAC58      ------->TEIL                       <-----------TGA1  <-------- ---------->GT1  --------->ANAC58    <-------TEIL                     <----------DOF2       <-------- ------->DOF2   <---------LBD16     *TSS                           <---------ARR11(3)       --------- -GLK1(2)  ------>MYB46(1)--------->ANAC58      ------>ZmHOX2a(1)  --------->ARR11(3)------>ZmHOX2a(2)   caaagtaaataccaatcgcacggagacgaagcaaggaagtgcatcttctccttctcttctcggtttcaagagctttcgtcatttagatctgggttttgta  1036600           <------NtERF2          --------->LBD16                                       --------->ZAT2         <---------ANAC46                                       <---------ZAT2        <---------LBD16                                 <---------GLK1(2)                           -        <---------------------WRI1                   --------->HSFB2a(2)              <---------TOE2(3) ----->ANAC46                                        <---------HSFB2a(2)      --------->ZAT18       - -------AtSPL3                                      <---------LBD16           <---------ZAT18       < -------AtSPL8                <---------ATHB12   --------->At4g35610  <---------At4g35610          -- ------>AtSPL8  <-----------GT1  ------->TEIL    <---------At4g35610  --------->At4g35610  --------->MYB52(2)   catcaccaatggcggaatttactaacatgctaatgaatccatgggttcttcatctccagaagctcgagctcgagctcaagtgccctctatggtttgtttc  1036700  Previous    Next  AGI:  At1g04010.1    Description:  phosphatidylcholine-sterol O-acyltransferase. similar to ATPDAT (Arabidopsis thaliana phospholipid:diacylglycerol acyltransferase), phosphatidylcholine-sterol O-acyltransferase [Arabidopsis thaliana] (TAIR:AT5G13640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40589.1); similar to putative sterol esterification protein [Citrus sinensis] (GB:AAX56094.1); similar to lecithine cholesterol acyltransferase-like protein [Medicago truncatula] (GB:AAN77002.1); contains InterPro domain Lecithin:cholesterol acyltransferase; (InterPro:IPR003386) Range:  from: 1031199    to: 1036236    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g04020.1    Description:  ATBARD1/BARD1 (BREAST CANCER ASSOCIATED RING 1); transcription coactivator. similar to ATBRCA1 (BREAST CANCER SUSCEPTIBILITY1), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G21070.1); similar to Os04g0512400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053298.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40381.1); similar to OSIGBa0157K09-H0214G12.23 [Oryza sativa (indica cultivar-group)] (GB:CAH68012.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain BRCT; (InterPro:IPR001357); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); cont Range:  from: 1036536    to: 1040223    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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