Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------------->AGL15                                        <---------bZIP60(1)                      <---------ANAC55(2)                                           <---------O2                      --------->ANAC55(2)                                           --------->bZIP60(1)                      <---------ANAC46                                  --------->HSFB2a(2)                      <---------ANAC55(1)                               <---------HSFC1(1)                      <---------ANAC58                    --------->ALFIN1        --------->REM1(2)                    <-----------GT1                      <------ZmHOX2a(1)       ----------->TGA1      --------->ALFIN1<---------ANAC58                 --------->ALFIN1 --------->HSFC1(1)     <----- -------->DOF2  --------->DAG2             --------->ANAC58    <------ZmHOX2a(1) ----------->HVH21 ---->AHL20(2) ---------->DOF2             --------->ANAC58 <------ZmHOX2a(1)   <-----------HVH21---- ->ATHB12 ----------->GT1          --------->At4g35610<------ZmHOX2a(1) <---------HSFB2a(2) <------ZmHOX2a(1)   aaaaagatgaggggggaaaaagttacctgttataggcatatgaacaagacaatggaggaggaggaggagatggtctagaaaccgtgacgacggaggagga  907200                                 --------->AHL20(2)                                 --------->AHL20(1)                                     <---------HSFB2a(2)                            --------->AHL20(1)                                 --------->HSFB2a(2)                            --------->AHL20(2)                                 <---------HSFB2a(2)       --------->CCA1(2)    <---------AHL20(2)                              <---------DAG2  ---------->DOF2    ----------->GT1                       --------->ATHB12 <----------DOF2 -ZmHOX2a(1)        >>>>>>>>>TBF1<---------AHL20(2)       <---------YAB1 --------------->AGL15 ------>DOF2     ------------------------>ANAC81  ----------->GT1        <---------------AGL15   aaagaaaagagatgaagtagaagaagaaaataaaataaaatagaggcaaaaatggaaattttcattggaattttgcaacttttagaaattgtagaagatg  907300                                                                                           ------>NtERF2                                                                                          --------->DEAR3(1)                                                                                          --------->RAP2.6(2)                                                                                         <---------RAP2.6(2)                                                                                         --------->ATERF1(1)                                                                             <---------At5g28300                                                                            <---------WRKY18(1)                ---------->DOF2                                            ----------->HVH21<------NtERF2             ------>ZmHOX2a(2)                                             --------->WRKY12<---------RAP2.6(3)       <---------ANAC46                    ---------->ID1          --------->AtMYB61     --------->RAP2.3(1)   --------->ZAT2                         <-----------GT1          <---------ALFIN1     <---------ATERF1(1)   --------->At4g35610                <----------DOF2             --------->O2   <---------MYB52(1)   <---------At4g35610       <-----------GT1                    <---------ALFIN1<-------GAMYB   <---------ZAT2--------->DAG2<-----------GT1           <----------DOF2   --------->WRKY38(1)   aagagagctgtgtgatccaaaagtgtttttttttctctctcttttttcgtttttgttttctttctcccacctctccattgaccgttaagttgccgccttc  907400                                                      --------->ZAT14                                             <---------ICU4        --------->At5g28300                                            <-------TEIL          ------->GAMYB                                          --------->ARR14(2)   --------->MYB52(1)    <---------ZAT6                                          <---------GLK1(2) ------>MYB83       --------->At4g35610            ------>MYB83                  <---------ARR14(2)------>MYB46(1)    <---------At4g35610            ------>MYB46(1)        <---------DEAR3(2) <---------ZAT18       <------ZmHOX2a(2)         --------->ANAC46        <---------ORA47(1)   <---------ZAT14     --------->At4g35610       -   ttctctcttccaccaaattgttcttgacacatttggacggtccagattcattacagttcacctatcaacggtgatcagatcagttgagagttaacaaaac  907500                                                                                                  <--                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                    <---------ANAC46            <----                                                                <---------ANAC58               ------                                                                <---------ANAC58               <-----                                                               <------MYB83                    <-----                                                               <------MYB46(1)                 ------                                                               <---------MYB46(3)              <-----                                                             <---------WOX13(1)                ------                                                        --------->At4g35610           <---------HSFB2a(2)                                         --------->GLK1(2)<---------YAB1             <---------LBD16                                         --------->ARR14(2) <------------CBF        <---------ANAC46                                         <---------ARR14(2)--------->ATHB12    <---------REM1(1)-----   ---------->DOF2               --------->At4g35610    <---------At4g35610--------->DAG2      ====== <---------YAB1                  --------->CCA1(2)    <---------ZAT14     =========================== -------->YAB1          <---------ATHB12<---------GLK1(2)------>ZmHOX2a(2)---------->DOF2      <-----   aatattaaagcccatctcaaggcccaataaacgagagatgaagaatctgaaactagtgatctgattggttgagggaaaaagctgtagcctggaagacacg  907600     -------->P  <---------MYB52(2) ---------HVH21 -->MYC4 --->ABF1                                                                               >>>>>>>>>SPL4 ---MYC4                                                                                --------->SPL7 -->MYC2                                                                                >>>>>>>>>SPL7 ---MYC2                                                                              --------->LBD16 ---MYC3                                                                             <---------ANAC46 --->O2                                                                              <---------ANAC58 ----O2                                    --------->LBD16                           <---------ANAC55(2) ----ANAC55(2)                            <---------HSFB2a(2)                        <---------ANAC58 --->ANAC55(2)             <-----------HVH21                                        --------------->AtSPL8 ---ABF1            <---------ARR11(3)    <---------LBD16                         --------->ARR14(2) --->TGA1a         <---------CCA1(2)     *TSS                                     ------------------>SPL14 -->MYC3         --------->TOE2(3)       <---------LBD16                     <-----------HVH21 =============MYC_MYB     <-----------RAV1(1)                      --------->ANAC58 <---------------- ====bZIP_DOF    <---------DAG2    ------>ZmHOX2a(1)               --------->ANAC58 --------------->AtSPL3 ----TGA1a       --------->TOE1(3) ------------>CBF           ----------->HVH21   <---------ARR14(2)   tgtcactaacccaaaactaccttatcttctgtcgctcctcaattcggggaaaatcgaagacactgtgacactctagcaccttcagttccgtacaacaatg  907700                                                                           --------->GLK1(1)             --------->ARR14(2)                                          <---------ICU4             <---------ARR14(2)                                          --------->ATHB12         ------>NtERF2                                                  --------->ICU4      <---------At4g35610                                               <---------ATHB12      <---------ZAT2                          --------->DAG2            <---------YAB1      --------->At4g35610                    ---------->DOF2          --------->YAB1      --------->ATHB12      --------->ZAT2                     ----------------->AGL2    --------->YAB1        <---------YAB1     --------->ANAC46                    ----------------->AGL3  <---------MYB52(1)      --------->ICU4 -------TaNAC69(2)                    --------->WOX13(1)    <-----------GT1<---------GLK1(1)   gctctccaagctgcctattctcttcttccttctaccatttcaatccaaaaagaggtatgttttcaccattagtaatgatttccatcttgttatgatttgt  907800                               --------->YAB1                               ----------->GT1                              --------->ICU4                    --------->TOE1(3)                    --------->TOE2(3)       ----------->GT1     ---------->DOF2                 <-----------GT1         <---------AtLEC2<---------ANAC58            --------->ARR14(2)    --------->AHL20(2)        <---------ATHB12           <---------ANAC58   <----------DOF2   tttcgataaaatgaagaatttacctcaatgcaatggtgattttgcagggcaaattcaatgcttctctaaaggagacgacttttactggttcttcattttc  907900                                 <---------WRKY18(1)                                 >>>>>>>>>>WRKY11                                 >>>>>>>>>>WRKY6                                --------->WRKY12                                <---------ETT(2)                        <---------ALFIN1                       --------->MYB46(3)                    --------->GLK1(1)                    <---------GLK1(1)                --------->MYB46(3)                    --------->CCA1(2)         --------->DAG2                   --------->ARR11(3)        ---------->DOF2      ----------->GT1      --------->GLK1(1)                   <---------ARR11(3)    <---------TOE2(3)  <---------ARR14(2)         --------->CCA1(2)               ---------->DOF2  --------->WRKY45     <---------ATHB12                 <---------ARR11(3)          <---------At4g35610   --------->WRKY38(1)--------->WOX13(1)                 --------->ARR11(3)          --------->At4g35610 xxxxxxxxxxxxxxxx>smallRNA(fl3)--------->ARR14(2)    ---------->DOF2   aaaccatcttagagctgaaaagatatccaccctgttgaccatcaaggtaaagtcaatcaccctatacgatgtgaaattctcaaaaaaagatatcgaaaac  908000                                                                                                    -                                                                                                   --                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              <------NtERF2                                                                                              -------                                                                                             --------                                                                                             ------>NtERF2                                                                                             <-------                                                                                             <-------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                           --------->ORA47(2)                                                                                           --------->RAP2.6(1)                                                                                           --------->ATERF1(1)                                                                                           --------->RRTF1(1)                                                                                           --------->RAP2.3(1)                                                                                           --------->DEAR4(2)                                                                                           --------->ERF1                                                                                          ------>NtERF2                                                                                          <---------ATERF1(1)                                                                                         ============                                                                                         <---------O2                                                                                         --------->TGA1a                                                                               ====================MYC_MYB                                                                               <-------GAMYB---------                                                                           ========================MYC_MYB                                                                           ------------>AtMYB77------                                                                      --------->ZAT18    <---------ALFIN1                                                                      --------->ZAT14    --------->O2                     <-------GAMYB                                    <---------ZAT18    --------->ANAC46                 <---------MYB52(1)                                <---------ANAC58      --------->ANAC58          <-----------GT1   <------ZmHOX2a(1)         <-----------GT1 <---------ZAT14    --------->bZIP60(2)    ----------->GT1 <---------ANAC58            --------->LBD16    <---------ANAC58      --------->ANAC58   <---------TOE2(3)<---------ANAC58        --------->ARR14(2)  --------->ARR14(2)     <---------ALFIN1 ------>ZmHOX2a(1)  --------->MYB52(2)      <---------ARR14(2)<---------MYB52(1)  <---------At5g28300   gtcctgaggtttatactctgtttcgttgcaggaacagagaagacagaaaccgcgattttccaccggtattcgtgcacagacagttacagccacgccgccg  908100  Previous    Next  AGI:  At1g03630.1    Description:  POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE); NADPH dehydrogenase/ oxidoreductase/ protochlorophyllide reductase. Identical to Protochlorophyllide reductase C, chloroplast precursor (PORC) [Arabidopsis Thaliana] (GB:O48741); similar to PORA (Protochlorophyllide reductase A), oxidoreductase/ protochlorophyllide reductase [Arabidopsis thaliana] (TAIR:AT5G54190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23962.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro: Range:  from: 907641    to: 909375    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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