Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------LBD16                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                   --------->MYB52(1)   <---------TOE2(3)                     --------------->AtSPL3        ------------>AtMYB77 <---------TOE1(3)                     <---------------AtSPL8    <---------GLK1(1)    --------->YAB1                    <---------ARR11(3)         --------->GLK1(1)   <---------YAB1--------->ALFIN1                   --------->RVE1(1)    ---------->DOF2            <------ZmHOX2a(2)      <---------ANAC58                   --------->CCA1(1)--------->GLK1(2)             <---------ARR11(3)      <---------ANAC58 ---->GT1    ----------->GT1        --------->ARR14(2)        <---------ALFIN1 --------->LBD16   ---- >DOF2   --------->ARR11(3)        <---------GLK1(2)  <---------MYB46(3)--------->DAG2    <---------ANAC46   aaaatgcagaaggtattgaaaatatcgtacattgccagaatccaaagggatatcaacggttgcaccacgatcataaggttccggtggaagtggcttgaga  887600             <------ZmHOX2a(1)              <---------AHL20(2)          <-----------RAV1(2)               --------->AHL20(1)                 <------ZmHOX2a(2)      <---------ANAC58                      <---------AHL20(1)                <---------ARR11(3)    -      <---------ANAC58              ----------->RAV1(1)                       --------->ARR11(3)  ---      <---------ANAC46     <---------YAB1   --------->AHL20(2)            ---------->DOF2        <--- ----->CCA1(2)  <------ZmHOX2a(1)  --------->REM1(1) <------ZmHOX2a(2)<---------ZAT14 --------->ICU4<   taagagttgctcgcaggaggaacacttgtatgattctacaacataataaattgagatcaaatggagaaagactacagaaagatcagacattagtattcag  887700                                                                   <---------bZIP60(2)                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                 <-----------HVH21                                                              <---------ANAC58                     <-                                    ==============================HOX2a_HOX2a                     <--                                  <---------ARR11(3)          ------>ZmHOX2a(2)          --------->MYB52(2)                                  --------->ARR11(3)          <---------ANAC58          <---------TOE1(2)                             <------ZmHOX2a(1)              >>>>>>>>>ARR2              <---------MYB52(1)                             ==============HOX2a_HOX2a      <---------ARR14(2)       ------>ZmHOX2a(2)   <---------YAB1        ---------->DOF2                    --------->ARR11(3)      <------ZmHOX2a(2) <---------ICU4       --------->LBD16                       >>>>>>>>>ARR1          <---------ARR11(3) -------->ICU4      <---------LBD16 ------>ZmHOX2a(2)       --------->ARR14(2)     --------->ARR11(3) ------>YAB1        <-----------------AGL1                 =================================HOX2a_HOX2a ------ATHB12      <---------At5g28300                     <------ZmHOX2a(1) <----------DOF2      --- ---------YAB1  <----------DOF2<---------WOX13(1)          ================================HOX2a_HOX2a   tcattatgaaacagagctctttaccgcaaaaggattgatctcttcatcagcaaatggattaggatcgtgtcgtgccattctttgagatcgtttgttttaa  887800                                       ----------->GT1                                       <------MYB83                                       <------MYB46(1)                                       <---------MYB46(3)                                      <---------DEAR3(1)                                      --------->MYB111(2)                                      --------->MYB55(2)                                      <---------MYB46(3)                                      --------->MYB111(1)                                      --------->MYB46(2)                                      <---------AtMYB61                                     <---------MYB55(1)                                     <--------P                                    <-------GAMYB                                    <---------ANAC58                                    <---------ANAC58                                   --------->MYB52(2)                                   <------MYB83  --------->ANAC58                 --------->MYB55(2)  --------->ANAC58                 <---------MYB46(3)                --------->ANAC58 -----ZmHOX2a(2)                  <---------AtMYB61                  --------->ANAC58 -------ARR11(3)                 <--------P      >>>>>>>>>WRKY18     ----------->ARR10         <----- ------>ARR11(3) --------->MYB52(1)<------MYB46(1)     --------->GLK1(1)--------->GLK1(2)----------->GT1   gatcaagaaacttattcaataacagagtttttggagttggttggtgaattttgacagaaatcgaaaatgggaagaaactggtttgaacgaatggatactt  887900                              --------->ATERF1(1)                              <------NtERF2               --------->ALFIN1       ---------->DOF2                             ------>NtERF2               <---------ZAT18       --------->At4g35610        ----------->GT1      ----------->RAV1(1)         --------->ZAT18       <---------At4g35610--- -----DOF2           <---------ATHB12--------->GLK1(1)  *TSS         <---------MYB52(1)    <---------ALFIN1   tgtagtcagagagagaaaactaaatcaatggcgccagagaaatcgaaggcattttagagggtgctcgcttcgttttttttcagcaaagtttcaacaccta  888000                   --------------->AGL15                   <---------------AGL15                  ----------------->AGL3                  ============================================================================MADS_MADS                  <-----------------AG                                    --------->ZAT14           <                  <-----------------AGL3 <---------ZAT14    <---------WRKY12            <---------GLK1(1)                  <-----------------AGL1 --------->ZAT14    <---------WRKY38(1)         --------->GLK1(1)                  ------------>CBF   ------>ZmHOX2a(2)     --------->WRKY18(1) --------->YAB1  ------       <------------CBF            <---------ARR14(2)     <-----------HVH21   --------------->AGL15 <    --------->ANAC58               --------->ARR14(2)     <--------ZAP1   <---------ZAT18      <-----    --------->ANAC58        <----------DOF2        <---------AHL20(2)     --------->ZAT18    -------- ------>AHL20(2)  <-----------------AGL2<----------DOF2 --------->MYB59   <---------ZAT14  <---------LBD16   ttaaacaggcattgttttcttccaattttggtttatggatcggtttactggattttattcggtcaattggatttagttcactagtaatagaattccggtt  888100                                                                             ------->TEIL                                                                           <---------ZAT18                                                                          --------->ANAC58 <----------DOF2                                                          --------->ANAC58 ---------ANAC58                                 --------->AHL20(2)     <---------DOF5.7(2) --->ARR14(2)                               --------->LBD16             ---------->DOF2 ---------ANAC58                          <---------LBD16<---------MYB46(3)------->GAMYB            < ----ARR14(2)                           --------->ARR14(2)            --------->DOF5.7(2)   <-------- ->LBD16                                <---------ARR14(2)           <----------DOF2        ---------   ttgcttttcatgttgagtttttcaacggtttgattcaatttgaatccggttttaaatattggttacgaacactttaacgcacttcaaaagtttgaatccg  888200                --------->ANAC58         --------->MYB52(2)       <--------P       <---------MYB52(1)      <-------GAMYB      --------->At5g28300   <-----------HVH21     <---------MYB46(3)    --------->bZIP60(2)    <---------ANAC46  ----------->HVH21                                     ---------->DOF2    <---------RAP2.6(2)  <---------bZIP60(2)       <------ZmHOX2a(2)       --------->YAB1       <----   <---------LBD16---------->DOF2                 --------->ARR11(3)      <---------YAB1    <-------- ----------DOF2 --------->ANAC58        <---------MYB52(1)        <---------MYB52(1)        --------- -ARR14(2)    <---------ANAC46<-----------GT1     <---------ARR11(3)--------->MYB52(2)      --------- >ARR14(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <-----------GT1    <---------ZAT6      <-----------GT1 -   aactttgcggttagtggctcgaaagtgacatgtcacaacttcgtttgtaacagatcattcattctattgttagtttatcaaagttataactcaattatat  888300                                                                                            ---------                                                                                            ---------                                                                                <---------SPL7                                                                               --------->MYB46(3)                                                                               --------->DEAR3(1)                                                                               <---------MYB52(2)                                                                              --------->ANAC46                                                                              --------->ANAC58    <---------ARR11(3)                                              ---------->DOF2         ---------    --------->ARR11(3)            <---------TOE2(3)        <-----------HVH21  --------->ANAC58 -----AHL20(2)        --------->ARR11(3)                  ----------->GT1     --------->ANAC55(1) -AHL20(2)            <---------ARR11(3)        <---------ANAC58 --------->ANAC58 --------->SPL7  --- >AHL20(2)        ---------->DOF2--------->YAB1 <---------ANAC58 --------->ANAC46--------->MYB52(1) >YAB1  <-----------GT1<------ZmHOX2a(2)  --------->At4g35610    --------->ANAC58------>MYB46(1) ---- -------->YAB1   <---------AHL20(2)       <---------At4g35610    --------->AtLEC2------>MYB83 -------   aatgaagatttaactatattaaaagatcaatactataatgtttcagcttatcgtgctaacatgttacatgcaaagaacacaccgaacgaagcacaagaaa  888400                     <------ZmHOX2a(2)                    --------->AGP1                    <---------AGP1                    <---------ARR11(3)                    --------->ARR11(3)               --------->CCA1(1)                    --------->ARR14(3)        --------->TOE2(3)                    <---------ARR14(2)        ------->GAMYB    --------->AHL20(2)                        ----------->RAV1(1)    <---------AHL20(2)------>ZmHOX2a(2)      --------->MYB46(3)                        <---------ANAC58 >ANAC46            --------->ARR14(2)       <---------MYB55(2)                        <---------ANAC58 >ANAC58            <---------ARR11(3)      ------>MYB46(1)                          <---------YAB1 >ANAC58<---------AHL20(2)                  ------>MYB83                          <---------YAB1 <--- -------->GT1       <---------ARR14(3)      -------->P--------->ARR11(3)         --------->TOE2(3) ------->GT1       <---------CCA1(2)   <-----------HVH21     ------->TEIL<---------ANAC55(2)     ---- --->DOF2---------->DOF2           --------->MYB52(1)--------->RVE1(1) --------->AHL20(2)        ----   gggaaattatataaagttttcagatcttgattttaaaaaccggtccaaccacaaaatatcatgtatatacaaattacataaaacattattcgtgagaaac  888500  Previous    Next  AGI:  At1g03550.1    Description:  secretory carrier membrane protein (SCAMP) family protein. Identical to Secretory carrier-associated membrane protein 2 (SCAMP2) [Arabidopsis Thaliana] (GB:Q9LR68); similar to secretory carrier membrane protein (SCAMP) family protein [Arabidopsis thaliana] (TAIR:AT2G20840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24113.1); contains InterPro domain SCAMP; (InterPro:IPR007273) Range:  from: 885623    to: 887956    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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