Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->MYB46(3)             >>>>>>>>>MYB98            ------>MYB46(1)          <---------MYB46(2)                                           <---------YAB1          <---------MYB111(2)                                        -------->HAHB4          <---------MYB111(1)                                        <---------ICU4 ------->GAMYB<------------MYB.PH3(2)                               --------->ICU4 -------->MYB46(3)     --------->AHL20(2)                           <---------ATHB51 ------>MYB52(1)     <----------DOF2    <---------CCA1(2)        <---------AHL20(2) --->ANAC58 --------->MYB52(1)         ----------------------->TaNAC69(2)                          -- --->ANAC58 ------>MYB83           --------->ZAT2                --------->AHL20(2)        <--------- --->ANAC46--------->MYB55(1)      <---------At4g35610       <---------ATHB12     <---------ARR11(3) ->ZAT6   <---------MYB59          <---------ZAT2       ------>NtERF2--------->YAB1     --------->YAB1   caacagccactacctaacaaacacttttaatagttccagctcgtatcgtttttcatgcctccaaagattaattatgattttcaaaatcatttataactat  739300             --------->YAB1               --------------->AGL15     ------->MYC3                         <---------------AGL15     <-------MYC3           ------>ZmHOX2a(2)                                            <---------AHL20(2)  <---------ALFIN1        --------->ARR11(3)                                             --------->AHL20(2) ------->ANAC46   <<<<<<<<<<WRKY63       ----------------->AGL2                  <XXXXXXXXXXXXXXXXXXX --GT1    <----------DOF2 <---------ARR11(3)                                 --------->TOE2(3)   ccctccacatgtctttaatagtcaaattgatcttatattaaaaactctatatagtaagaccaagtgaattttaaaattacatcaatgcgatttatatgga  739400                                                          <---------ANAC46     --------->AHL20(2)                                                --------->TOE2(3)              <---------AHL20(2)                                                --------->YAB1   <---------ARR14(2)            --------->AHL20(2)               <----------DOF2     --------->ARR14(2)    ---------->DOF2    ---------->DOF2                       ------>NtERF2   <---------ANAC58  --------->YAB1 XXMIR393A/B<---------AHL20(2)        --------->AtLEC2    <---------ANAC58 --------->AHL20(2)      --   tgattcaaaagtatttatatttcaaaactgaaacaaggccttgcagcctttcttaatgcttcgtgcagataggcccattaataaaacaataaagcccata  739500                                                                                  <-----------TGA1                                                                                  <-----------HVH21                                                                                 --------->ANAC58                                                                                 --------->ANAC55(1)                                                                                 --------->bZIP60(1)                                                                                 <---------TGA1a                                                                                 <---------O2                                                                                 --------->ANAC58                                                                                 <---------bZIP60(1)                                                                                 --------->bZIP60(2)                                                                                 <<<<<<<<<<HY5                                                                                 --------->O2                                                                                 --------->TGA1a                      --------->ANAC58                                           --------->ANAC46                      --------->ANAC58                                   --------->ARR14(2)                      --------->ANAC46                     ------>MYB83  <---------ARR14(2)                 --------->ANAC58                          ------>MYB46(1)       <---------ANAC55(2)                 --------->ANAC55(1)                     --------->AtMYB61<----------TaMYB80                 --------->ANAC46            <---------ARR14(2)     =======================bZIP_DOF                 --------->ANAC58--------->bZIP60(2)     <---------MYB59 ---------->TaMYB80            ---------->DOF2    <---------ALFIN1          --------->MYB46(3) --------->ANAC46         ----------->GT1      <------NtERF2  --------->ARR14(2)     ---------->DOF2         <---------ANAC55(2) --------->RAP2.6(2)     <---------ETT(1)--------->DAG2        --------->MYB59------->GAMYB        --------->GLK1(1)    --------->YAB1  --------->ANAC55(2) --------->GT1   <---------ANAC55(2)        <---------CCA1(2)   <---------YAB1  <-----------STF1   cttgtaaaatcaggtaaagacgcaacgcaagcggcacatcagacacatatccattccgaccaaaccatgataaagtatatgccacgtcactattcatcgt  739600                      ------>MYB83                      ------>MYB46(1)                     ----------->RAV1(1)                 >>>>>>>>>>WRKY43                 >>>>>>>>>>WRKY38                 >>>>>>>>>>WRKY26              <------------CBF                                                             --------->HSFC1(2)          --------->ANAC55(2)                                                              <---------HSFC1(2)          --------->ANAC58                                  --------->At4g35610            <---------HSFB2a(1)          --------->ANAC58             <------MYB46(1)   <---------At4g35610     --------->ZAT14          --------->ANAC46             <------MYB83      <-------GAMYB         *TSS        --------->HSFB2a(1)        <-----------GT1          <---------MYB52(1)   ------->GAMYB  <---------ALFIN1<---------LBD16   cgattagtttttacgaaattgaccaacataccctcgttgtttggttttatctacaacgcagttgctgagtcacacttgttttcttcactcggaaaattcg  739700                                                                                               ------                                                                                             <------NtERF2                                                                                             <-------                                                                                            <--------                                                                                            ------>NtERF2                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                          --------->ATERF1(1)                                                                                         <---------ATERF1(1)                                                                                         --------->LBD16                                              <---------HSFB2a(1)                        ------>NtERF2                                --------->ZAT18  <-------TEIL                           <---------RAP2.6(2)                                <---------PCF2--------->KAN4(1)                        <---------LBD16                                <---------ZAT18--------->KAN4(2)                     <-----------GT1                             --------->ALFIN1 <---------HSFC1(2)                 <---------AHL20(1)                           <---------ANAC46   --------->HSFB2a(1)                --------->AHL20(1)                     ----------->TGA1         <---------KAN4(1)                  <---------ARR11(3)                   <---------ICU4        --------->ANAC46                        --------->ARR11(3)                   --------->YAB1       <---------LBD16                         --------->CCA1(2)       <------ZmHOX2a(2)   --------->ALFIN1   --------->HSFC1(2)               --------->ARR11(3)      <---------ARR11(3)<---------DEAR3(1)   <---------KAN4(2)                 <---------ARR11(3)   aaaatcgagatcaaatgtcgatgatgacggtgtgggcacttcgacggaatgttcgtcggaaaaatcactcgatgctcgtgagatatatttccggctccgc  739800                                         <---------ANAC58                                         <---------ANAC46                                         <---------ANAC58                                        <-----------------------TaNAC69(2)                                        <------NtERF2                                      <---------DEAR3(1)                                   <---------AtMYB61                   <---------YAB1                                   <-----------RAV1(1)               --------->YAB1                               --------->ARR14(3)                   <------ZmHOX2a(2)                               <---------ARR14(2)                  --------->ARR14(2)                               <---------GLK1(2)                   <---------ARR14(2)                               <---------ARR14(3)                --------->LBD16 --->LBD16                     <---------ARR11(3)              <---------LBD16 --LBD16                     ----------->ARR10             <---------ANAC58 -ATERF1(1)  <------ZmHOX2a(1) --------->ARR11(3)          <---------ANAC58   atcgatgaagcctaaggagcaatgtattgagaagattttggtggcgaacagaggcgagattgcttgccggatcatgagaacggcgaagcgtttagggatt  739900                                                                             <------NtERF2                                                                            <---------ALFIN1                                                                            --------->ANAC58                                                                     --------->ARR14(2)                                                                     <---------ARR14(2)                                                                  --------->ANAC55(2)                     <---------At4g35610                          --------->ANAC58                    <---------ANAC46                              --------->ANAC58                 ----------->HVH21             --------->ARR14(2) <---------ANAC55(2)             <---------At5g28300              --------->GLK1(1)  --------->SPL1(2)          <----------DOF2       --------->CCA1(2)                --------->SPL7--------->DEAR3(1)       <---------ANAC58         --------->ARR14(1)              --------->SPL1(1)       <---------RAP2.6(2)     --------->ARR14(2)            <---------------AtSPL3       <---------ANAC46        <---------ARR14(2)            --------------->AtSPL3       <---------ANAC58        <---------GLK1(2)   <---------At4g35610      --------->ANAC58       --    <---------MYB52(1)         --------->ARR11(1)  --------->At4g35610<---------WOX13(1) <---------ZAT6   <-------GAMYB ----------->TGA1<-------TEIL <---------GLK1(1)<---------SPL7------>NtERF2      <----   cagaccgttgcggtttacagtgacgctgatagagattcgctccatgtgaaatctgcagacgaagcggtacggattggcccgccctcggctagacttagtt  740000                                         --------->ZAT18                                         --------->ZAT14                                         <---------ZAT14                   --------->YAB1                                     --------->ALFIN1                     --------->KAN4(1)                                 ----------->HVH21                        <---------KAN4(1)                           <---------DEAR3(1)                            <---------KAN4(2)                          --------->ATERF1(1)                           --------->YAB1                          <---------At4g35610                       ---------->DOF2       --------->ALFIN1   <------NtERF2  <---------ZAT18         --------->LBD16    <---------DEAR3(1)    --------->At4g35610                   --------->LBD16   <---------At4g35610   <---------ATERF1(1)                    --------->ANAC46   --------->At4g35610 --------->ATERF1(1)                     <---------HSFB2a(2) ---------->CDC5       <------NtERF2 <-----------RAV1(1)       --------->LBD16 ------->TOE2(3)--------->YAB1<---------ANAC46                <---------LBD16             --------->At4g35610 -------GT1    <---------YAB1--------->ZAT2                  ------>ZmHOX2a(2)            <---------At4g35610   acctcagcggtgtgactatcatggaggcagcggctcggactggtgcacaggtatgagttttgatccccgaaaaagaataatcgtgttcttgtagctgatg  740100                                                     --------->HSFB2a(1)                                                     <---------HSFC1(2)                                                     <---------HSFB2a(1)                                                     --------->HSFC1(2)          --------->ARR14(2)              <-----------GT1                      ---------->DOF2               <---------ARR14(2)         <---------AHL20(2)                   <-----------HVH21                  --------->ARR11(1)         --------->AHL20(2)                <---------ANAC58          <---------ALFIN1           <----  <----------DOF2                          <---------ANAC58   <----------DOF2   <------ZmHOX2a(1)----   tcttctttgaattatataactaggcaatacaccctggctatgggttcttgtcagaaagttctgactttgcccaactctgtgaggattcgggtctaacatt  740200  Previous    Next  AGI:  At1g03090.1    Description:  MCCA (3-methylcrotonyl-CoA carboxylase 1). Identical to Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (MCCA) [Arabidopsis Thaliana] (GB:Q42523;GB:Q9SA61); similar to CAC2 (acetyl co-enzyme A carboxylase biotin carboxylase subunit) [Arabidopsis thaliana] (TAIR:AT5G35360.1); similar to Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor (3-methylcrotonyl-CoA carboxylase 1) (MCCase subunit alpha) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit alpha) (GB:Q42777); similar to 3-methylcrotonyl-CoA carboxylase, biotin-carrier domain (GB:AAA53140.1); similar to unnamed protein product [Vitis vinifera] Range:  from: 739679    to: 744184    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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