Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->CCA1(2)       <---------ARR11(3)       --------->ARR11(3)                         --------->At4g35610 -------AHL20(2)                             --------->CCA1(2) -----AHL20(2)                              --------->AHL20(1)                         --------->AHL20(2) --->AHL20(1)                               <---------AHL20(1)     --------->STY1(2)  <---------AHL20(1) ----AHL20(1)                         --------->YAB1               <---------STY1(2)  --------->AHL20(1) ---AHL20(2)                     <---------ARR14(2)--------->TOE1(3)       --------->ICU4   --------- >AHL20(2)<---------AHL20(2)     --------->ARR14(2)--------->TOE2(3)    <------ZmHOX2a(1)  <---------AHL20(2)   atttttgaagatttaaactcattttgtttcttccatatatgcataatatataagcttaaatagaaaactagctaggaatgaatactaatatatataatga  544400                     --------->ANAC58                     --------->ANAC58                  <---------ARR14(2)                  --------->ARR14(2)                --------->LBD16            --------->WOX13(1)              <---------LBD16     --------->AHL20(1)             --------->MYB52(1)   --------->ARR11(3)     --------->ATHB12  <---------YAB1--------->ANAC46------->TEIL            <---------YAB1                  --------->ICU4 --------->AHL20(2)<---------ALFIN1       ------>ZmHOX2a(2)                        <---------ANAC55(2) >YAB1      <-----------GT1  ----------->GT1  --------->YAB1                   <-----------HVH21 <---   cattaatataagtcttaccggacactccaaaatgtatatattgatctatcaacattttttcattggtttactaaaccaagttgtcacataaatatgagtt  544500                                                               ------>MYB46(1)                                                               ------>MYB83                                                               ----------->RAV1(1)                                                      --------->ANAC58                                                      --------->AtLEC2                                                     --------->WOX13(1)                                                    ---------->DOF2                                                  <-----------HVH21                                                 --------->ANAC46                                   <               <---------AHL20(2)                --------->ANAC58                                   -              --------->YAB1                   <<<<<<<<<<<<WRKY18                    ================             <---------YAB1                <-----------HVH21--------->ANAC58         ================           --------->YAB1               --------->ZAT2--------->ANAC58    <-------TEIL             --   <----------DOF2                      <---------At4g35610 --------->ANAC58         --------------->AGL15  <---------DAG2               <---------AHL20(2)--------->ANAC58 <---------ARR11(3) <---------------AGL15 ------DOF5.7(2)            ------->TEIL--------->At4g35610 --------->ANAC46   --------------->AtSPL8   aacgcctttttttttataatattgtatatgaatttaaacttgagctgtcaaacgtcaagcaaacccaacatctacatacatatagtactatattttgaaa  544600                                          --------->ANAC58                                          --------->ANAC46                                      --------->ANAC58                           --------------->AGL15                                      --------->ANAC58                           ------>ZmHOX2a(1)                                    ---------->DOF2                             <---------------AGL15                                <----------DOF2                                 --------->TOE1(3)                               --------------->AGL15                            --------------->AGL15                              ==================================================================MADS_MADS                              ----------------->AG                    --------->YAB1                              ----------------->AGL1              --------->LBD16<---------------AGL15                <-----------GT1<---------------AGL15    --------->ANAC55(2)     --------->TOE2(3)           <---------AHL20(2) ----------------->AGL3    <---------ANAC55(2)  <-----------GT1        --------->TOE2(3)     ----------------->AGL2   <-------TEIL <---------GLK1(2) ---------AHL20(2)          <-----------GT1          --------->ARR14(2) <---------YAB1         <----- -------->AHL20(2)       <---------AHL20(2)          <---------ARR14(2)<---------AHL20(2)      ------ ===============================================MADS_MADS        <---------HSFB2a(2)   <---------TOE1(3) ===============================================================================================MADS_MADS ------->AHL20(2)      <---------AHL20(2) --------->ANAC58       --------->HSFB2a(2)   <---------TOE2(3)   attaaaattttcttaaatttcccatattattttccttttaaagcaagcaagtccaaatacgtttcttccagattataattttccttaataaggttttcta  544700                                                   ------>MYB83                                                   ------>MYB46(1)                                                  ----------->RAV1(1)              *TSS----------->GT1                              <----------DOF2   --------->MYB46(3)                <---------ANAC58   --------->AHL20(2)    <-----------GT1      <-----------GT1                     <---------ANAC46 ----HSFB2a(2)      --------->AHL20(2)    ------>ZmHOX2a(1)             ---------->DOF2<---------MYB46(3) --->HSFB2a(2)      <---------AHL20(2) <---------YAB1             ----------->GT1 <---------ANAC58  -   caaaaaaaaatcaacttcttatttaaaaaaccctttgcattatccttttcaccaacatcagagaagacgagaaaaaaagaagaggcgagtggttaatgga  544800                                                              <---------ANAC58                                                        <---------AHL20(2)                                                        <---------YAB1                                                       <---------AHL20(2)                                                   <---------AHL20(2)                                                  <---------ARR11(3)         <------ZmHOX2a(2)                                                  <---------AHL20(1)   --------->YAB1           --------->ANAC46                      <---------CCA1(2)    <---------YAB1      <---------TOE1(3)    --------->MYB52(2)                     <---------GLK1(1)  <---------ANAC46            <---------TOE2(3)  <--------P                               --------->GLK1(1)  <---------ANAC58    --------->YAB1 ---------->GT1                         <---------YAB1 --------->AHL20(2)<---------WOX13(1) <-------GAMYB   gaaggttagtttcactccaaacatatatgaattgactaggttatgaaatccatatattttaattgtgtgtttatgatagatcaataacatttagggttga  544900                <---------YAB1        ------>ZmHOX2a(2)              --------->YAB1        <---------ARR11(3)          ------>ZmHOX2a(2)     <---------AtLEC2                                 <------ZmHOX2a(1)        --------->ARR11(3)      --------->YAB1                       <------ZmHOX2a(1)  <---------ANAC58            --------->AtLEC2      <---------YAB1--------->HSFB2a(2)               <  <---------ANAC58      <-----------HVH21      <----------DOF2    <---------HSFB2a(2)  <---------MYB46(3)   attttcttgtgatctattatgttattcgtcccatgcatgatccataaaacttttatttttgaatttgtctaggaaaaccatgaggacgatggtgagggtt  545000                                                                                    <---------AHL20(1)                                                                                    --------->AHL20(1)                                                                                 --------->YAB1                                                                              <----------DOF2                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                         <---------ANAC58                                                                         <-------GAMYB <---------AHL20(2)                                                                         <---------ANAC58                                            <---------GLK1(1)           <------MYB46(1)--------->AHL20(2)                                  ---------->DOF2                       <------MYB83<---------AHL20(2) ------>NtERF2      ---------->DOF2         --------->GLK1(1)           <---------MYB46(3) ---------ALFIN1--------->At4g35610--------->DAG2        <---------TOE2(3)<--------P--------->AHL20(2)   tgccacccgaactaaatcagataaaagagcaaatcgaaaaggagagatttctgcatatcaaggtaagagacatttggttgctttaatattttattctctt  545100                                                                          <-------TEIL                                                                      <---------TOE2(3)                               <------ZmHOX2a(1)                      <---------YAB1                          <------ZmHOX2a(1)                     <---------ARR11(3)     ----------->GT1                     <------ZmHOX2a(1)                          --------->ARR11(3)  ------------>MYB.PH3(1) ------->TEIL      <---------TOE2(3)     --------->YAB1   ---------->DOF2--------->CCA1(2)     ------   ctgtatgtttttctgaaaattaaggagaggagaggacttaatctcataactatacgattccaaagagatgttaagatacatctaataaacagttatacat  545200                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                --------->MYB52(1)---                           --------->HSFC1(2)--------->AHL20(2)                 <---------DOF5.7(2)       <---------ICU4      <---------HSFB2a(1)                                --------->DOF5.7(2) <--     --------->GLK1(2)     <---------HSFC1(2)<---------AHL20(2)           <---------ARR14(2)---------     <---------ARR11(3)    --------->HSFB2a(1)        <---------GLK1(2)   --------->GLK1(2) ---------   --------->ICU4  ---------->DOF2       <---------AHL20(2)           <---------At4g35610   <-------- --------->YAB1 --------------->AGL15    --------->AHL20(2)           <------NtERF2        <---------CCA1(2) --->TOE2(3)    <---------------AGL15   --------->AHL20(2)           ------>NtERF2       --------->HSFB2a(2)   tagtcataatctttaaaactaaaaagagaaatttccaaacttttaaattaaaaacagaatttagaaaatgccagcgaatcgataacgacatccagatctg  545300  Previous    Next  AGI:  At1g02580.1    Description:  MEA (MEDEA); transcription factor. Identical to Polycomb group protein MEDEA (MEA) [Arabidopsis Thaliana] (GB:O65312); similar to EZA1 (SWINGER), transcription factor [Arabidopsis thaliana] (TAIR:AT4G02020.1); similar to MEDEA [Arabidopsis halleri] (GB:ABS87910.1); similar to MEDEA [Arabidopsis lyrata] (GB:ABS87922.1); similar to MEDEA [Arabidopsis lyrata] (GB:ABS87924.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 544783    to: 549202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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