Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->ANAC46                                                                       --------->ANAC58                                                                       --------->ANAC58  <-----------GT1                                                    --------->MYB52(1) ---------AHL20(2)                                                   ------>MYB83 -------->AHL20(2)                              <---------CCA1(2)    ------>MYB46(1) ---->ICU4               --------->MYB52(2)    ------>ZmHOX2a(1)   --------->AtMYB61 ---->GT1      <----------DOF2<---------AtLEC2--------->TOE2(3)  >>>>>>>>>>MYB80 ---------->DOF2   <-   aattaaactattctattctttgtttcttagttgcattgaaaacgttttccttatctcacttgtatcaaaccaaacgaaactaaaaaagactattgtttga  517900                                                                                                    <                                                                                                -----                                                                                                <----                                                                                                <----                        ----------->RAV1(1)                                  <---------At5g28300-----              <-----------GT1                                               <-----------GT1     -----             ----------->HVH21             --------->AHL20(2)  ------>ZmHOX2a(1)                <----         <---------ANAC46     --------->AHL20(2)      <---------YAB1  --------->TOE2(3)         -----  <---------YAB1    <-----------HVH21      <---------AHL20(2)  <----------DOF2                 ------ --------AHL20(2)<---------LBD16     ----------->GT1 --------->AHL20(2)------>ZmHOX2a(1)       <-----   tataatttttgatgtgtaacccggtccaacaatttcatatggtatttatttgaatttttatagtccttttttcctaaattacagtcttacagacacaatt  518000                              --------->ANAC58                              --------->ANAC58                              --------->ANAC46   <----------DOF2            --------->ANAC55(2) ---------AHL20(2)           <---------TOE1(3) ---->ATHB51            <------MYB46(1) ----HAHB4              <------MYB83 -----ICU4              <---------MYB46(3) ---->AHL20(2)       <---------MYB52(1) --->ATHB1      <---------ARR14(2) -----AHL20(2)  --------->ARR14(2)                  ------>MYB46(1)                               --- ---->YAB1----------->GT1   <---------DOF5.7(2)     ------>MYB83 --------->YAB1              -------- --->ICU4XXXXXXXXXXXXXXXXXXXX>MIR1886.2             --------->MYB52(1)                     <--------- ----ATHB51     --------->GLK1(2)     <-----------GT1<---------ATHB12                <---------ICU4   attttctttgaaatgaaaaatccgattggttcacgttatataacaagtcggaccaatcggtccccaatagtcagaaaattttgaaaataatgccaaaaaa  518100                                                                            ------>MYB46(1)                                                                            ------>MYB83                                                                  <---------MYB46(3)                                                                  <------MYB46(1)                                                                  ----------->GT1               -----            --------->ANAC58                                      <------MYB83                  <----            <------MYB83               <---------AHL20(2)        --------->ALFIN1             -------          <--------P    --------->ANAC58       <-----------GT1   <---------AtMYB61           <-------   --------->ICU4       --------->ANAC58  <-----------GT1      <---------ANAC58       ----------->HVH21 -------->GT1         ---------->DOF2 <---------AHL20(1)       <---------ANAC46       --------->WRKY12 ->AHL20(2) <------MYB46(1)           --------->AHL20(1)---------->DOF2<-----------GT1--------->WRKY38(1) ------AGL15--------->ANAC58    <-------TEIL <----------DOF2   <---------ANAC58      <-----------HVH21   tagtaaatattggtaggccaactccaaagccaaatacatatatatttctttacaagtccaaagtagggtggtttaaccaaataaaccggtgaccagtcat  518200                                  <---------At4g35610      --------->At5g28300     ------->MYC3     --------->TOE1(3)        <-------MYC3     --------->TOE2(3)      ------>MYB46(1)     ----------->GT1        ------>MYB83   ------->TEIL            --------->MYB52(1) <---------ZAT14          --------->TOE2(2) --------->ZAT14          ------->GAMYB --------->ZAT18         --------->MYB46(3)                                        <-----------------AGL1 ---->ICU4             <-----------GT1             *TSS                     --------->ZAT6<---------TOE1(3) -----YAB1        --------->AHL20(2)        <----------DOF2               <-----------GT1 <---------TOE2(3) -->ATHB12        ----------->TBP --------->At4g35610                 <----------DOF2<----------DOF2 --ATHB12---------->DOF2 <---------MYB52(2) <---------DAG2   <---------MYB52(1)   ---------->ID1-----   tagtgaaccgtaaaaggcctataaataaccaacgtgttctgactcactttctcgtctcaaaccgttccttctcttttaacacttgttcttttaaggcaaa  518300                                                  --------->ARR14(2)                                                  <---------ARR11(1)                                                  --------->GLK1(2)                                                  ------->TEIL                                                  <---------ARR14(2)                                                 <---------ARR14(1)                                                 <---------CCA1(2)                                                 <---------GLK1(2)                 ------>ZmHOX2a(2)             --------->DEAR3(1)                --------->CCA1(2)           ------>ZmHOX2a(2)                <------ZmHOX2a(2)      ------>ZmHOX2a(2)               --------->AGP1         <---------At4g35610               --------->ARR11(3)     <------ZmHOX2a(2)               <---------ARR14(2)     --------->CCA1(2)               <---------AGP1        <---------AGP1               --------->ARR14(2)    <---------ARR11(3)               <---------ARR11(3)    --------->AGP1              <---------GLK1(1)      <---------ARR14(2)        ----------->RAV1(1)          --------->ARR14(2)     --------->ANAC58                --------->ARR11(3)     --------->ANAC58               <---------GLK1(1)    <---------GLK1(2)                     <-----     --------->ANAC46             --------->HSFB2a(2)    <---------ICU4                  --------->ARR14(2) ----->DOF2   --------->GLK1(1)   <---------HSFB2a(2) --------->YAB1                     <---------ARR14(2)   aaggctcgagccacagagatctgagtttctcttcttcgagatctgatcgccgaatctcataatctcccatcgaagcaggtattgttcttcgtattcgctt  518400                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                           <---------ANAC46                                                           <---------ANAC58                                                           <---------ANAC58                                                       <---------ANAC46                                                       <---------O2 <-----------GT1                                                       <---------TGA1a                                                       --------->O2<-----------GT1                                                       <---------ANAC58                                                       <---------bZIP60(2)                                                       <---------ANAC58                                                       --------->TGA1a <---------CCA1(2)                                  ----------->HVH21        <---------TOE2(3) -----DOF2                           <---------At4g35610  <-------TEIL     ----------->HVH21   ctcgtttctctctcgatgtattgttcatttttgttttccagttgattttcaagtctgacgtgcgtattttttccgatttgacgatggaagtagatttaag  518500                                                                   --------->At4g35610           <---                                                                   <---------At4g35610         ------                                    <---------At4g35610            <---------ZAT2              <-----                <---------TOE2(3)   --------->At4g35610  --------->ATHB12                      <-----           ------->TEIL<---------AHL20(2)     <-----------GT1      --------->ZAT2              ------          <---------CCA1(2)    <---------GLK1(1)        <---------YAB1                        -------     <-----------GT1   --------->AHL20(2)  <----------DOF2      <------ZmHOX2a(2)    <---------GLK1(2)   ggactattgactgtatctatggtttttaattagatttcagctactctttaaccattttgttattggatcagcagcgatttcgttatagattctcaaaaat  518600        <-----------RAV1(1)                 --------->ATHB12        --------->ALFIN1                   <---------YAB1    <---------At4g35610                    --------->ICU4    --------->At4g35610             <-------GAMYB                        --------->GLK1(2) ------GLK1(2)                     <---------ANAC58                     <---------ARR11(3) --->AHL20(1)                      <---------ANAC58                     --------->ARR11(3) ----AHL20(1)                      <---------ANAC46                   <---------TOE2(3) ----ARR11(3)                 <-----------RAV1(1)              <---------ARR11(3)                   < --->ARR11(3)                <---------TOE2(3)                 <---------GLK1(2)               ------ -->YAB1<---------ANAC46<---------ZAT6   <---------AtLEC2      --------->ARR11(3)         <---------ANAC46   attctcagatgtgtgggatttgagtagagtttatgttgcgttggcatgatttgaatagtatgcaagatttttgagattttgaattcgttcatgtgtgtat  518700                                                             --------->ANAC46                                         <---------AtLEC2 --------->TOE2(2)                      <-----------GT1   <-------TEIL      --------->TOE1(2)         <---------ANAC46        <---------AHL20(2)     >>>>>>>>>MYB98                            ---         <---------ANAC58     ----------->GT1       --------->ANAC55(2)                <---------WRKY12 ---------YAB1  <---------YAB1--------->MYB52(2)    ----------->GT1                    <---------WRKY38(1) ->TEIL  <---------ANAC58   <---------MYB52(1)      <---------ANAC55(2)       --------->YAB1      <--   gtgtgattgtagcttgatatgatttaacctgttagttaaatgtgcatagacaataagtaacatacgaagcgagtcactaagcataagagtcaacttgttt  518800  Previous    Next  AGI:  At1g02500.1    Description:  SAM1 (S-adenosylmethionine synthetase 1); methionine adenosyltransferase. Identical to S-adenosylmethionine synthetase 1 (SAM1) [Arabidopsis Thaliana] (GB:P23686;GB:Q941A8;GB:Q9FEE0); similar to MAT2/SAM-2 (S-adenosylmethionine synthetase 2), methionine adenosyltransferase [Arabidopsis thaliana] (TAIR:AT4G01850.1); similar to MTO3 (S-adenosylmethionine synthase 3), methionine adenosyltransferase [Arabidopsis thaliana] (TAIR:AT3G17390.1); similar to MAT2/SAM-2 (S-adenosylmethionine synthetase 2) [Arabidopsis thaliana] (TAIR:AT4G01850.2); similar to S-adenosylmethionine synthetase [Brassica juncea] (GB:AAK71235.1); similar to S-adenosylmethion Range:  from: 518251    to: 520437    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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