Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->LBD16                                 <---------LBD16                 <---------ZAT2                                <---------LBD16                  <---------At4g35610 -------->At4g35610      ------>NtERF2                           --------->ZAT2       <---------ARR11(3) ---------At4g35610  --------->AtLEC2     <------------------------ANAC81             <---------GLK1(2)   agagctcaacatactggagggccatgcagccaagaccgggactctcatttagtttgcctagtttccgagctgttctgttctggttcaagatgctcaccat  414200               ------>ZmHOX2a(1)             <---------ANAC46              <------NtERF2             <---------ANAC58    --------->ZAT6             <---------ANAC58<---------MYB111(1)                             --------->GLK1(2)           <---------ARR14(2)<---------MYB52(2)                              <---------ARR14(2)    <---------At4g35610      <---------MYB46(2)                              ------->TEIL           <    --------->ZAT2  <---------ATHB12       ------>NtERF2      --------->AHL20(2)                    -    <---------ZAT2  --------->MYB46(3)   <---------ZAT18   --------->YAB1    --------->ARR14(2)------    --------->At4g35610      <------------MYB.PH3(2)    --------->YAB1  <-----------HVH21  ----------   ttcatgagctgagtttcctgcaaccattctaactaacacttagtccgcctaaaacgaatcaacataatataaactgtcgaatctggttctgactaaagaa  414300 ---------ZAT18          --------->ALFIN1                                         --------->ARR14(2) -------->ZAT18        --------->ALFIN1    ---------->DOF2           --------->GLK1(1) ---->DOF2  <---------AHL20(2)--------->At5g28300   ----------------->AGL1        <---------ARR14(2) >DOF2     --------->AHL20(2)----------->GT1   ----------->RAV1(2)   <---------GLK1(1)          <----   agcgaactcgagattaaatcagagggagtggctgtaaattcaaaataaagcctggccaaatgctgaacgagaaatccaagtctatattcgcatatgttat  414400                    <---------ANAC46         --------->ICU4                  <---------At5g28300--------->ZAT2       --------->ANAC58              <---------STY1(2)       --------->ANAC58          <---------At4g35610                                        <--------      --------->DAG2<---------ANAC58 <---------ZAT2              --------->At5g28300        <--------     ---------->DOF2<---------ANAC58 --------->STY1(2)----------->HVH21               <---------YAB1 -----YAB1       <-----------GT1 --------->ZAT2 <---------YAB1  ----------->GT1  ---------->DOF2   gaggggataaagcaaggagttaccgtgcaatttggagctagctagcactgatgagagtgacagaaacagtaaaatcaactccaaaatgctgatttcgttc  414500                                                   --------->GLK1(1)                                                   <---------GLK1(1)                                                  <---------GLK1(2)                                                  --------->ARR14(2)                                                  <---------ARR14(2)                                                 <------NtERF2                                               <---------ANAC58                                               <---------ANAC46                --------->At4g35610            <---------ANAC58                ------>ZmHOX2a(1)             <------NtERF2    <---------ANAC58                          <---------LBD16    <---------ANAC46                        --------->ALFIN1    <---------ANAC58 <---------GLK1(1)    --------->At4g35610 <---------CCA1(2)   --------->GLK1(1)    <---------ZAT2                     --------->MYB52(1) -ANAC58    <-----------GT1               <---------At4g35610   <---------HSFB2a(2)   <----------ID1 -ANAC58   <-----------GT1                --------->ZAT2       ----------->GT1     ---------->DOF2  -   ttcatatcgtgttttatcctctgaattcccagcgtaatagctcgagctggcggattttcgaaaaatcgagaaaaacaaaaaacagaaaaggagaaagttt  414600                                                                        <------------CBF                                                                       -------->ATHB1                                                                       --------->ATHB12                                                                       --------->ATHB51                           <---------WRKY18(1)                     <-----------------AGL3                      <---------ARR11(3)                      <---------ICU4             <----------DOF2         --------->LBD16  <-----------RAV1(1)      --------->At4g35610 --------->WRKY38(1)*TSS     --------->ALFIN1<---------YAB1 --------->DOF2       --------->ARR11(3) --------->AHL20(2)   --------->ATHB51 ----------->GT1    <--   ttgaaaggagatgagcttgatggagatgttgactggtccctgaataaatgaaaaatgtgttgcattatttctattattgagaagaaaaaaaccaggcatt  414700                                                                        <---------ANAC46                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                   <---------ANAC55(2)                                                                   --------->ANAC55(2)                                   --------->ATHB12                <---------ANAC58                                  --------->MYB46(3)               <---------ANAC58             --------->ATHB12     <---------ATHB12                <-------TEIL                      <          <----------DOF2 <---------ZAT18                     <---------------AtSPL3          <------   <------------CBF   --------->ALFIN1                        <---------------AtSPL8         <-------  --------->ATHB12  <-----------RAV1(1)   <------------CBF   ---------->DOF2                 -------- -------TOE2(3)    <---------TOE2(3)<------------CBF ---------->DOF2 ----------->HVH21     --------->TOE2(3)   ttggttattgggctttgatttgatgttgggctctcaaccattgaaattgaatgaagaaagaaggaaagtacgtgacttgaatttcatttacttcattaaa  414800              <---------DEAR3(2)             <---------MYB46(3)             --------->MYB55(2)             <---------DEAR3(1)          <---------PCF2          --------->TCP20       --------->ALFIN1      --------->ALFIN1     <-------GAMYB    <---------ANAC46    <---------DEAR3(1)   --------->ATERF1(1)   <------NtERF2  <---------DEAR4(2)  <---------RAP2.3(1)  ------>NtERF2  <---------ORA47(2)  <---------ERF1--------->ALFIN1  <---------ATERF1(1) <---------RAP2.3(3) <---------RAP2.3(2)          <---------ATHB12 <---------DEAR3(1)           ----------->HVH21 <---------RAP2.6(2)  --------->ALFIN1 ---------ABI4(1)  <---------AtMYB61                                                             ---- ---AHL20(2)--------->ATERF1(1)--------->YAB1                                        >>>>>>>>>>>>>>>> --AHL20(2) <------NtERF2<---------PCF2<---------ANAC46--------->DAG2                <<<<<<<<<<<<<<<< ->AHL20(2)------>NtERF2----------->TCP11(1)          ---------->DOF2          <---------ATHB12 <----   tgggcggcgttggggccggtggaggtgggccaatgacattgatgtgtaaacagaggtaaagccgaattttggctaaggcgaatcaatgcccattggctcc  414900                                                                                              <------                                                                                        --------->AtMYB61                                                                                        <---------ALFIN1                                                                                   <---------ATERF1(1)                                                                                  --------->PCF2                                                                                  <---------TCP16(1)                                                                                  <---------TCP20                                            <---------AHL20(2)                   --------->GLK1(1)                                           <---------AHL20(2)                   <---------ATERF1(1)  ------>ZmHOX2a(1)                 --------->TOE2(3)                         --------->LBD16 <------ -->ZmHOX2a(1)         --------->GLK1(1)   --------->AHL20(2)                <---------LBD16  ------- >LFY               <---------TOE2(3)  --------->AHL20(2)                   <---------LBD16   ------- <LFY--------->ANAC55(2)        <----------DOF2<-----------RAV1(1)    --------->YAB1   --------->MYB46(3) -----ALFIN1        <---------TOE1(3)  <---------AHL20(2)       --------------->AGL15<---------ALFIN1   tctccttacatatttgaagtttgaggtttccttccttttcttaaattaaatgttgctgtaacatttctactattgtaaaccggggctccaccaccatgtg  415000                           <-------MYC3                           ------->MYC3                     <---------ICU4                        <---------ALFIN1                    --------->YAB1                       --------->RAP2.3(3)                 --------->ICU4              --------->ANAC58                       --------->ZAT18                   <--------HAHB4                --------->ANAC58                     --------->PCF2          --------->YAB1<---------YAB1             ---------------                     <---------ZAT18        <---------AHL20(2)          <-----------HVH21 -MYC3          <---------YAB1 --------->WRKY18(1)      <---------YAB1 --------->bZIP60(1) -MYC2          --------->At4g35610        --------->AHL20(2) <---------YAB1          <-------------- >MYC2        --------->YAB1  <-----------HVH21   <----------DOF2<---------YAB1*TSS   <-------------- >MYC3<---------ALFIN1 <---------ZAT18    ----------->TBP--------->YAB1<---------bZIP60(1)------->TEIL   cttcttcaacactgtatcatcagagcccacatggtcatgcctctatataatactttgtattattattattcttatgtcacattataaacaagtacctcca  415100  Previous    Next  AGI:  At1g02180.1    Description:  ferredoxin-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO70470.1); contains InterPro domain SCP-like extracellular (InterPro:IPR014044) Range:  from: 413522    to: 414645    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02190.1    Description:  CER1 protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G37700.2); similar to catalytic [Arabidopsis thaliana] (TAIR:AT2G37700.1); similar to CER1 (ECERIFERUM 1) [Arabidopsis thaliana] (TAIR:AT1G02205.2); similar to Sterol desaturase [Medicago truncatula] (GB:ABN07985.1); similar to Sterol desaturase [Medicago truncatula] (GB:ABD28316.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17291.1); contains InterPro domain Sterol desaturase; (InterPro:IPR006088) Range:  from: 415079    to: 418010    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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