Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ----------->HVH21    --------->At4g35610    <---------At4g35610     <------NtERF2                                       --------->DAG2  <-----------RAV1(2)   --------->ALFIN1                              <---------ARR14(2) -----------HVH21      <---------MYB46(3)              --------->ANAC58       ---------->DOF2 -----MYB46(1)  --------->LBD16                    --------->ANAC58   --------->ARR14(2) -----MYB83   <---------LBD16                      --------->ANAC58   --------->GLK1(2) ------>MYB59 --------->ZAT18                    ---------->DOF2<------ZmHOX2a(1)----------->GT1 --->GLK1(2) --------->ALFIN1          <---------ZAT6  --------->ANAC58  <----------ID1   ttggtcaggggacaagtgcggaagacgggtggcattgcctagtgtttcgatgaaagcaagtcaagaggagagaatatgacaaaagggaaaacgaattgaa  389200                                                                                <---------ARR14(2)                                                                                --------->ARR14(2)                                                                                --------->GLK1(2)                                                                            --------->ANAC46                                                                         <-------TEIL                                                                         --------->ZAT18         ----                                          <------NtERF2              --------->LBD16             <---                                       <-------PIF5               <------ZmHOX2a(2)              <---                                       ------->PIF5--------->ANAC58 <-----------RAV1(2)       -------                                      --------->At4g35610         --------->CCA1(2)     <---------ARR14(2)                                      <---------At4g35610        <---------ARR14(2)     --------->ARR14(2)               <-----------HVH21      --------->ZAT2             --------->AGP1<---------GLK1(2) ----         ---------->DOF2              <---------ZAT2             --------->ARR11(3)   <---------MYB46(3)     ----------->HVH21              <-----------RAV1(2)          --------->ARR14(2)<-----------RAV1(1)   --------->At4g35610             --------->LBD16 --------->ANAC58 ===========================RAV  -   atagcatatgacaaaggggtcatacatttgtagtctccccaggtgccatgggcaaacaagcgtagtagatccaggtacacagaatctgtggttccttcaa  389300                                                                                              -------       --------->YAB1                                                                        -------- ----->ZAT2   --------->WOX13(1)                                                          --------->YAB1 ------ZAT2  --------->AHL20(2)                                                       ---------->DOF2 ------At4g35610                             --------->YAB1                      ----------->GT1 --->DOF2<---------YAB1        --------->WOX13(1) --------->At4g35610          --------->ARR11(3) ----->At4g35610   --------->At4g35610      --------->ICU4        ----------->GT1------>ZmHOX2a(2) -------->ZAT18    <---------At4g35610      <---------YAB1  ---------->DOF2    <---------ARR11(3)   gctgcacaattacgattaatcagctactagtatctatcaagttgttatgatcagcgaagaacaaaagcatgtaaaaccctagatcgtgaaaagcataaag  389400                                                                                              <------                                                                                          <---------ARR14(2)                                                                                    --------->PCF5                                                                    <---------ANAC46--------->TCP16(1)                   <---------ANAC46                                 <---------ANAC58<---------PCF5                  <---------MYB46(3)                                <---------ANAC58--------->PCF2---      --------->TOE1(2)           <---------LBD16              --------->ALFIN1     --------->TCP20     ----------->RAV1(2)       --------->GLK1(2)               --------->O2         <---------PCF2<--     ===================RAV    <---------ARR11(3)              <---------bZIP60(2) ------>NtERF2  <-- -->DAG2      --------->ATHB12<---------GLK1(2)                <---------O2     --------->At4g35610-- -->DOF2    ----------->RAV1(1)--------->ARR11(3)       <------ZmHOX2a(1)  --------->YAB1 --------->ARR14(2)   tagtagtacctgggcaacattgggtagagccaaaatctcggagaaggcgaagagagaaggatgcgatgtggcttcgatgatgagcgggcccagagcctcg  389500                                      ------>ZmHOX2a(2)                                        <-----                                    --------->ARR11(3)                                         <-----                                    <---------ARR11(3)                                     <---------            --------->ZAT2    <---------YAB1              <---------GLK1(1)              <---------MYB46(3)   <---------AtLEC2      <---------ZAT2    <---------ANAC58                              --------->MYB55(2) ---LBD16   --------->At4g35610    --------->YAB1<---------At4g35610                    <---------AtMYB61 ------>ARR14(2)         --------->At4g35610   <---------ANAC58                        <---------MYB52(1) -------GLK1(2)          <---------At4g35610   <---------ANAC58                       --------->LBD16 -------ARR14(2)         --------->ZAT2    <---------ANAC58                         <---------LBD16 ------->GLK1(1)  <----------DOF2 <---------ATHB12        --------->GLK1(1)      <---------GLK1(1)   gatttgcaagtagaagctcgcttcacgagctgatcaatgatctcggcttgcttctgctcgatatccatcttccaaacaaatcgatttccggtggtttagg  389600                                                                                                    <                                                                   <---------MYB52(1)             ---        <-----------GT1                                           <------------------------ANAC81 ---      <---------ANAC58                                           <---------ANAC58               -----   <----------DOF2                                               <---------ANAC58               ----- ----TOE2(3)        --------->MYB52(1)            --------->At4g35610                          ------ ----TOE1(3)     --------->YAB1                   <---------At4g35610<-----------TBP      --------->ANAC55(2) -DOF2<---------ANAC58     --------->AHL20(2)  *TSS    ------>ZmHOX2a(1)    <-----------GT1 ---------   gttttctttcttaccacactaataacgaataaaatcccaaacttcttctctctgctccttccttcttccgtttttatattactgttttttttatgtgacc  389700                           <------------CBF                          --------->ATHB12                          <---------ICU4                          --------->ATHB51                          <--------ATHB1                          -------->HAHB4                         <---------YAB1                         --------->ICU4                         <---------AHL20(2)          <---------HSFC1(1)          --------->HSFC1(1)   --------->ARR14(2)    <---------ATHB51                                                        ---- ---------MYB59        --------->YAB1                                                       --------- --->MYB83<---------HSFB2a(2)                                                               <-------- --->MYB46(1)         <---------AHL20(2)           --------->HSFB2a(2)                     <---------MYB46(3) ------>HVH21 --------->GLK1(2)              <---------TOE1(2)                            <---------- ---->MYB46(3)--------->ARR11(3)          <---------ANAC46                              <-----------HVH21 --->DEAR3(2)<---------GLK1(2)            <---------ANAC58                            --------->LBD16 -->HVH21 --------->HSFB2a(2)             <---------ANAC58                        --------->ARR14(2)   gaccgaattcttctagaatcttgtttaataattgggctcaaatttcgtagtttctgggccaaggcctactaagagaaatattagaaaccgcgtctggtga  389800            *TSS                                                                --------->GLK1(2)          --------->LBD16                                                      <---------ARR14(2)          <---------LBD16                                                      --------->ARR14(2)   <          <---------ANAC46                                                     <---------GLK1(2)   <-   <---------ATHB12                                                           <------NtERF2       <--   ------------>CBF                         --------->TOE2(3)               <---------ANAC46     <--- ----->At4g35610                       <<<<<<<<<TBF1                       <---------LBD16=========== >At4g35610--------->LBD16        --------->KAN4(2)                 ------>NtERF2         ----------- -At4g35610<---------LBD16       <---------KAN4(1)                 --------->DEAR3(1)   --------->At4g35610 -RAV1(2)<---------LBD16         --------->KAN4(1)    <---------At4g35610<---------DEAR3(1)  ------->GAMYB   gcccaaacaatcccggggaagagagagactattgaatattcttcttccttcattttggctgagagagcgacgacgatggcggaatctcgcagcaacagag  389900                                                     <----------DOF2       --------->ANAC46                    --------->ANAC58     <-----------RAV1(2)                   --------->ANAC46    <-------TEIL             ------>NtERF2 --------->ANAC58   <---------ARR14(2)        --------->LBD16    ------>MYB83  <-------GAMYB             --------->ANAC58    -------->P <---------MYB46(3)         --------->ANAC46    ------>MYB46(1) <---------DEAR3(2)         ------->GAMYB --------->SPL7 ---------DEAR3(1)          --------->ANAC58  --------->DEAR3(1)          <---------ZAT18 -----NtERF2  --------->MYB52(1)      --------------->AtSPL8          <---------ICU4 -------RAP2.3(1)          --------->MYB46(3) <---------MYB46(2)  <---------AHL20(2) ------DEAR3(1)          ------->TEIL <---------------AtSPL3      --------->AHL20(2) ================RAV   <-------TEIL   <---------------AtSPL8    <----------DOF2           <---------- >RAV1(1)   <---------MYB52(2)  ----------->GT1<---------ALFIN1 --------->TOE2(3)<----------DOF2   <-   cggcggttcaggctactaacgacgatgcatccgccagtaaattgtacgcctacctctttctctcttctttaattagggctcttcttttttttttgttgtt  390000       <----------DOF2      ------>ZmHOX2a(2)    --------->ARR11(3)    <---------ARR11(3)    --------->ARR14(2)    <---------ARR14(2)           <---------ARR11(3)       ---------->DOF2                 --------->ARR11(3)    <---------AGP1               --------->ARR11(3) --------->CCA1(2)                     <---------ARR11(3)   <---------CCA1(2)         ---------->DOF2     ----------->GT1               <----------DOF2 -RAV1(1)              --------->AHL20(1)     --------->DAG2               <---------CCA1(2) --------ANAC46        <---------AHL20(1)    ---------->DOF2            <-------TEIL  ---------->DOF2   gttgtggatctttgagcctagataatatttttaaaggtcttgtgtcaaaaagggatatatgaaagacgactatgttcatctctttgtgaaaagacctgtt  390100  Previous    Next  AGI:  At1g02090.1    Description:  FUS5 (FUSCA 5); MAP kinase kinase. Identical to COP9 signalosome complex subunit 7 (CSN7) [Arabidopsis Thaliana] (GB:Q94JU3;GB:O81247); similar to unknown [Populus trichocarpa] (GB:ABK94750.1); contains InterPro domain Proteasome component region PCI (InterPro:IPR000717) Range:  from: 387277    to: 389647    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02100.1    Description:  leucine carboxyl methyltransferase family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN69755.1); contains InterPro domain Leucine carboxyl methyltransferase (InterPro:IPR007213); contains InterPro domain Leucine carboxyl methyltransferase, subgroup (InterPro:IPR016651) Range:  from: 389812    to: 392816    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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