Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       gagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaga  270600                                                                                            <--------                                                                                           <---------ZAT14                                                                                          --------->AtMYB61                                                                                          <---------ALFIN1                                                                                         --------->MYB46(3)                                                                                         --------->bZIP60(2)                                                                                         --------->ANAC46                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                    --------->RAP2.6(2)                                                                                    --------->ANAC46                                                                               --------->At4g35610                                                                     --------->ANAC58  <---------ALFIN1                                                                     --------->ANAC58<---------ATERF1(1)                                                                  <---------SPL7   --------->ATERF1(1)                                                                <---------------AtSPL3 --------->ANAC46                               --------->ALFIN1                 --------------->AtSPL3<------NtERF2                               <---------MYB52(1)     <---------MYB46(3)       --------->ZAT14                              <-------GAMYB         --------->At4g35610       ------->GAMYB--------->ZAT14                      <------ZmHOX2a(2)             <---------At4g35610    ----------->RAV1(1)                    <------ZmHOX2a(1)  --------->HSFB2a(2)      <---------------AtSPL8--------->ATERF1(1)                  <---------TOE1(2)    <---------HSFB2a(2)     <------ZmHOX2a(1)  <---------ATERF1(1)   gagagagagagagaaactcacaggatcaagagcgttgggctctggaccgtaatcagcggttaagaggaagtacgatacaacagcagtcgccaccacactg  270700                                                                                                   --               <-----------------AGL1                                                           <----            <----------DOF2                       ---------->DOF2                             <------           <---------DAG2                       --------->LBD16                               -------       --------->MYB46(3)                      <---------HSFB2a(2)                           --------     --------->REM1(1)      <-------TEIL <---------ANAC58       <---------MYB52(1)           <-------  --------->TOE2(3)       --------->ARR14(2)   --------->HSFB2a(2)         *TSS          ------------  --------->TOE1(3)   <---------LBD16    <---------ANAC58      --------->LBD16       ----------->HVH21 -ALFIN1<---------ALFIN1  <---------ARR14(2)  <---------LBD16<---------LBD16       --------->ANAC55(2)   gttaccttcaccaccttttcaatttggggattcatcgatgttttcgttcccagaaagaacaattccggtgattttggtttttttcaagtgacacaatgat  270800                              --------->ANAC58                         --------->ANAC46    <-----------GT1      --------->ANAC58                             <---------ZAT18 --------->GT1           <----------ID1                            <---------ANAC58 -----YAB1               --------->ANAC58                      <---------MYB52(1)           --------- ---ICU4          ----------->GT1                             <---------RAP2.6(3)          ---------- -->YAB1       <------------CBF   --------->ARR14(2)         <---------ANAC58           <---------HSFB2a(2) ->ICU4       --------->ATHB12--------->ANAC46               <---------ANAC58        --------->TCP20 --ATHB12    <---------AHL20(2)------------>CBF              <---------ANAC46        --------->PCF2 >CBF        <---------YAB1   --------->ANAC58         <-------TEIL<---------ANAC58  <---------PCF2   gatgttatacgtttttttattggtaaaacgacacacaatccgatttgtgtaagaaaattcatgccgttttcgttcacttcaaatatgggcccagaaaggc  270900                                                    <----------DOF2                                                    <---------WOX13(1)                                              <---------ANAC46                                             ------>NtERF2                                          <---------ZAT2                                          --------->ZAT2                                          <---------At4g35610                                <-----------GT1<-------GAMYB                         <------NtERF2------>ZmHOX2a(2)                        ------>NtERF2<------ZmHOX2a(2)                       <---------ANAC46 <---------LBD16                    --------->ANAC46 <---------GLK1(1)                    <-------GAMYB                  --------->MYB52(1)<---------ARR11(3)                   <---------MYB46(3)                 ============================HOX2a_HOX2a                 --------->MYB55(2)                 ----------->HVH21  --------->ARR11(3)                   <---------DEAR3(2)                 ------>ZmHOX2a(1)  --------->ARR14(2)                  <---------DEAR3(1)   <---------ARR11(3)  --------->DEAR3(1) --------->At4g35610         <---------RAP2.3(1)   --------->ARR11(3)  <---------DEAR3(1)--------->ANAC46         <----------DOF2 ->DOF2          <---------REM1(2)  <---------ARR14(2)         ------>ZmHOX2a(2) >DOF2           ===========================HOX2a_HOX2a *TSS  <------ZmHOX2a(2)    --------->TOE2(3)-   ccaaacatctcatcaagtcctcacggcgtcgtttttaagatccccgctgcgttgatttatggcgatctctttcggcggttgaaaacctttgaaaattgaa  271000                                              <---------ZAT2                                              <---------At4g35610                                           ----------->RAV1(2)                                     --------->HSFB2a(1)                                     <---------HSFB2a(1)                                     <---------HSFC1(2)                                            <-                                    --------->SPL7                                                <--                                    ------->TEIL                                                  ---                                   ------>MYB83                                               <------                                 --------->MYB46(3)                                        --------->At4g35610                                 <---------MYB52(2)                                    ==============                     <---------ATERF1(1)  ------>ZmHOX2a(1)                      --------->At4g35610                     ------>NtERF2 ------>MYB46(1)                               <---------At4g35610                    --------->DEAR3(1)   <---------ALFIN1                     =======================                  --------->LBD16--------->DEAR3(1)                           =======================                  ------>NtERF2  <---------MYB46(2)                           ------>ZmHOX2a(1)  <---                  <---------ATERF1(1)--------->HSFC1(2)                 --------->ANAC58   <---------At4g35610                 <---------DEAR3(1)--------->ARR14(2)            --------->HSFB2a(2)   ==============            --------->AtMYB61   --------->ANAC58          <---------CCA1(2)  <---------ALFIN1 -------     --------->GLK1(1)      <-----------HVH21------>ZmHOX2a(1)   <---------HSFB2a(2)   ------>ZmHOX2a(1) ---------->GT1 <---------LBD16 --------->ANAC58 <---------At4g35610    --------->ANAC58 --------->REM1(1)   aatggagaaatcgacctctccggcgactcgagtcaccgaacctcctcctgctgctacttcatctcttccagcacaagctcctccgcttcctacatctgca  271100           --------------------->WRI1         <---------ZAT2         --------->At4g35610         ----------->RAV1(2)         <---------At4g35610         --------->ZAT2       <-----------RAV1(2)                                 ------------>AtMYB77      <------ZmHOX2a(2)                                   ----------->HVH21     --------->ARR11(3)                              <---------ATERF1(1)     <---------ARR11(3)                              ------>NtERF2    --------->GLK1(1)                               --------->DEAR3(1)    <---------GLK1(1)                              --------->ATERF1(1)               --------->LBD16 -----ZmHOX2a(2)                       <-----------RAV1(2)<---------ETT(2)         <-----------RAV1(2) -------ARR14(2)                    --------->ZAT2<---------RAP2.3(1)           <---------SPL7 ------>ARR14(2)                    --------->At4g35610   --------->ETT(2) <-------TEIL ---At4g35610                       <---------ZAT2<---------ATERF1(1)      ------>ZmHOX2a(2) ============HOX2a_HOX2a   <---------ZAT2<---------At4g35610              <------ZmHOX2a(2) ============HOX2a_HOX2a   <---------At4g35610    ------>NtERF2          <---------GLK1(2) =====HOX2a_HOX2a          --------->At4g35610<---------RAP2.3(3)        <---------ARR14(2) ------At4g35610           --------->ZAT2--------->At4g35610             --------->ARR14(2) =====HOX2a_HOX2a       ----------->RAV1(2)----------->HVH21   <-------GAMYB <-----------HVH21     -- -->At4g35610   <-----------GT1     <---------At4g35610 --------->LBD16  --------->AGP1     ---------   gatcagagatcagctgagttaccttcgcctgctcagccagctcagatgactgcgcctccgtcgacagttaccacagatccgtcgtccaggggaagaaagc  271200                           --------->At4g35610                           --------->GLK1(1)                     <------ZmHOX2a(2)                           ------>ZmHOX2a(2)                    <---------ARR14(2)                          <------ZmHOX2a(2)                    --------->AGP1                             <-----------ARR10            <---------ARR11(1)                                 <---------ARR14(3)               -----            <-----------ARR10                                  --------->ARR11(3)               <----            --------->ARR14(2)                                 <---------ARR11(3)              <-----            --------->GLK1(2)                                  --------->AGP1            <------MYB83            <---------ARR14(2)                 <---------ANAC58<---------ARR14(2)        <------MYB46(1)            ------->TEIL   <---------At4g35610 <---------ANAC58--------->ARR14(2)      <--------P  --           <---------CCA1(2)      --------->MYB46(3)           --------->ARR14(3)--------->HSFB2a(2) ------->ZAT18      --------->ARR14(2)        <-------TEIL ---------->DOF2       <---------HSFB2a(2) ->DOF2    <---------ARR14(1)     <---------MYB111(1)   <-----------HVH21 <---------ALFIN1     ------   gagcgctggaagcgaatcttcagatcgagagctccaactactacaagatgcgtctccttgtcaaagatcttcgccctcacgttctcgaggttggaccata  271300                                                                               <-----------GT1                                                                        <-----------RAV1(2) <---------YAB1                                                     --------->At4g35610 ---->ATHB51                               --------->ANAC55(2)    <---------ZAT18 -----ICU4                                 --------->ANAC46       --------->ZAT18 ----YAB1                          ----------->GT1               <---------ANAC58 ------->YAB1                  ---------->DOF2                   <---------ANAC58                   - --->ICU4            <----------DOF2     <-----------GT1         <---------ANAC46                 <--   attgtgataaaaacattcaaactctttgtttgggaaagggtttatacataacaacttggattttgtggtgtgctacaggttttacgaactccagacttga  271400                                                                                              <------           <-------GAMYB                                                                --------->DAG2      <---------TOE2(3)                               <----------DOF2         <---------At4g35610 --------->ZAT6       <-------TEIL          --------->ZAT6                    --------->At4g35610 -------->GLK1(1)    --------->CCA1(2)<---------ARR11(3)                <-----------GT1---------->DOF2 ----ZmHOX2a(1)      --------->GLK1(2)--------->ARR11(3)       --------->TOE2(3)      ---------->DOF2   ggaactctaaggcagttatcgagattcaagagagtgagaagctcttacactctcttcttttgttatctcaattttcacttagctcaacaaaaggcccaac  271500  Previous    Next  AGI:  At1g01725.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39583.1) Range:  from: 269792    to: 270775    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g01730.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39582.1) Range:  from: 270956    to: 272061    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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