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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                        <-----------GT1
                                                                                   <---------AHL20(2)
                                                                                  --------->AHL20(1)
                                                                         --------->TOE2(3)   -------
                                                                --------->HSFB2a(2)<---------YAB1
----ANAC58            --------->ANAC58                          <---------HSFB2a(2)--------->AHL20(2)
----ANAC58            --------->ANAC58---------->DOF2      <----------DOF2        --------->AHL20(2)
---ZAT2          --------->LBD16   --------->TOE2(3)    <---------ARR11(3)        <---------AHL20(1)
-->ZAT2--------->WOX13(1)          --------->TOE1(3)    --------->ARR11(3)     --------->AHL20(2)
 
tgcgatttagcaatctcacccgtgtaagaaacttaaaaccataaaaccaattgatataagagcttttctagcaaaaacttaaaaatataattaacaccgt  267900
                                      <---------At5g28300
                                     <-----------GT1
                                <---------DAG2
                                <----------DOF2
                             <-----------GT1                                                      --
                         --------->CCA1(2)          --------->ALFIN1                ---------->DOF2
     --------->ALFIN1   <---------ARR11(3)        --------->ALFIN1       ------->TEIL           ----
-->DEAR3(1)             --------->ARR11(3)        <---------ANAC46  --------->CCA1(2) <----------ID1
 
cgaaaatggtggaggctactagagcgagatataaactttatcaccgtttaatcgtgtgggattttgaaatgatatgaacctattgcaaaaagacaaaaaa  268000
                                         ------>MYB83
                                         --------->MYB52(1)
                                         -------->P
                                        <---------SPL7
                                        --------->ORA47(1)
                                       --------->DEAR3(1)
                                       ----------->HVH21
                                       <---------MYB111(2)
                                       --------->DEAR4(1)
                                       --------->MYB46(3)
                                       <---------MYB55(2)
                                       <---------MYB46(2)
                                      --------->MYB46(3)
                                   --------->MYB46(3)
                                  --------->CCA1(2)
                                  <------ZmHOX2a(2)
                                 <---------ARR11(3)
                                 --------->AGP1
                                 --------->ARR14(2)
                                 <---------ARR14(2)
                                 --------->ARR11(3)
                                <---------GLK1(1)
                         --------->TCP20--------->MYB55(1)
                         --------->TCP15(1)   --------->ARR14(2)                             -------
                         --------->TCP16(1)   <---------ARR14(2)                             <------
                         <---------PCF5------->GAMYB                                      --------->ARR14(2)
            <---------ARR14(2)  --------->GLK1(1)      --------->GLK1(2)                <---------SPL7
            <-----------ARR10  ----------->ARR10     --------->HSFB2a(1)            <------MYB46(1)
           ==============================HOX2a_HOX2a --------->HSFC1(2)            --------->MYB59
           <------ZmHOX2a(1) --------->LBD16--------->LBD16                <---------LBD16<---------ARR14(2)
    --------->MYB52(1)   <---------PCF2--------->DREB2C(2)                 <-----------RAV1(2)     <
------->AHL20(2)        ----------->HVH21------>MYB46(1)             ---------->DOF2<------MYB83   <
----->AHL20(2)        --------->ALFIN1--------->DEAR3(2)         <---------YAB1   <-------TEIL    <-
 
aaaatataaacggaggaactaggcagtgggaccggagatccaccgaccggaaacgaagaatccatagtaagatagagcccaggggttcggtcgtatcgga  268100
                                                                                           ------->GAMYB
                                                                                           =========
                                                                                        --------->MYB52(1)
                                           ----------->RAV1(1)                        --------->At4g35610
                                          --------->ANAC58                            <---------At4g35610
                                          --------->ANAC58                           --------->ANAC58
                                       <---------ARR14(2)                            --------->ANAC58
                                    --------->HSFB2a(2)                            --------->TGA2(2)
                                    <---------HSFB2a(2)                          --------->ANAC58
                               --------->TCP16(1)                                ==================MYC_MYB
                               <---------ARR14(2)                                --------->ANAC46
                               --------->TCP11(2)                                <---------O2
                               --------->ARR14(2)                                --------->ANAC58
                               <---------PCF2                                    --------->bZIP60(2)
                               --------->TCP20   --------->ANAC58                <---------TGA1a
                             <---------ZAT18     --------->ANAC55(1)             <---------bZIP60(1)
                             --------->ZAT18     --------->TGA1a                 --------->bZIP60(1)
                             --------->WRKY12    --------->ANAC58                --------->O2
    --------->ARR14(2)       --------->WRKY38(1) --------->ANAC46                <<<<<<<<<<AtbZIP1
    <---------ARR14(2)<---------TGA1a  --------->ARR14(2)  --------->YAB1        --------->TGA1a
---->HVH21            --------->O2 --------->LBD16 --------->TGA2(2)            ------>NtERF2
---SPL7   <---------GLK1(2) --------->ALFIN1     <---------TGA1a --------->TOE2(3)<-----------HVH21
-----------HVH21      --------->TGA1a--------->LBD16 --------->ANAC58          <---------ALFIN1
---------MYB52(1)     <---------O2----------->RAV1(1)--------->ANAC58       --------->ANAC46  ------
--------SPL7     <----------ID1--------->PCF5   <-----------------------TaNAC69(2)<-----------TGA1
 
ccggtcggatttggattctaacgacaagtgagtggacccccagaaacgacagacgtaagcaatgacaacatcaaactcatcgccacgtcagcaacggagt  268200
                                                                                  <---------ALFIN1
                                                                                 --------->ZAT18
                                                                             ------->MYC4
                                                                             -------->ABF1
                                                                             <-------MYC3
                                                                             ------->MYC3
                                    <-------MYC3                             <-------MYC4
                                    <-------MYC2                             <-------MYC2
                                    ------->MYC3                             ------->MYC2
                     <------NtERF2  ------->MYC2                            <---------TGA1a
                    <---------ATERF1(1)     <---------HSFB2a(2)             <---------ANAC55(2)
                  --------->ZAT2    <-------PIF5                            ========================
                  <---------ZAT2    ------->MYC4                            <---------O2
                  <------NtERF2     <-------MYC4                            --------->TGA1a
                 ------>NtERF2      ------->PIF5                            --------->O2
                 --------->ANAC46  <---------O2                             <--------ABF1
                 --------->LBD16   <---------TGA1a                        <---------ALFIN1
               <---------LBD16     --------->TGA1a                 <-----------ARR10
          ------->MYC3 <-----------TGA1     >>>>>>>ZML2            <---------ARR11(1)
          <-------MYC3 <-----------HVH21    --------->HSFC1(1)     --------->ARR14(2)
         <---------ANAC58          --------->O2                    <---------ARR14(2)
         <---------ANAC58        <---------ALFIN1                 <---------CCA1(2)
         --------->O2--------->At4g35610    <---------HSFC1(1)    <---------ARR14(1)--------->ANAC46
         <---------ANAC55(2)     <------------OsbHLH66        ------>ZmHOX2a(1)  <---------ZAT14
         <---------TGA1a        --------->DEAR3(1)         ------>ZmHOX2a(1)--------->ANAC55(2)
         <---------O2<---------At4g35610    --------->HSFB2a(2)  --------->LBD16 --------->ZAT14   <
         --------->ANAC55(2)    --------->MYB46(3)<-----------ARR10------->TEIL  <---------ZAT18   -
===================MYC_MYB  --------->MYB46(3)    <---------ARR11(3)      <------------OsbHLH66    <
--->GLK1(1) <-----------HVH21<---------ALFIN1     --------->ARR11(3)     <---------REM1(2)    ------
 
tctacttgcgaaacgtgtcccggcagcgtcatccacccacgtgtgttctagaagctcttctcctcctccgtatctcgacacgtgtccactccctctcctt  268300
                                                                                              ======
                                                                                              ======
                                                                                              <-----
                                                                                              ======
                                                                                             -------
                                                                                             -------
                                                                                             <------
                                                                                         <----------
                                                                                        <------ZmHOX2a(2)
                                                                                        ============
       <----------DOF2                                                                  ============
    <-----------GT1                                                              <------ZmHOX2a(1) -
  <---------WOX13(1)                                                             ==============HOX2a_HOX2a
 <------------CBF                                                                ===================
==================bZIP_DOF           <----------ID1                             <---------YAB1======
---------AHL20(2)                    --------->ANAC58                      --------->ATHB12 <------ZmHOX2a(1)
-------->AHL20(2)                    --------->ANAC58                 <---------YAB1    ============
---------YAB1                        --------->ANAC46           --------->ARR11(3)    <------ZmHOX2a(1)
>ZmHOX2a(1)                  *TSS  ---------->DOF2              <---------ARR11(3)    ==============
 
atataattgacttttctctcattctttccaagtttcaaaaacgccaagtttcagaggtagagagagagatactacaattgattaggataggatcaggatc  268400
        --------->AtMYB61
      -------->P
     ------->GAMYB
    <---------MYB111(2)
    --------->MYB46(3)
------>ZmHOX2a(1)
=============================HOX2a_HOX2a
===================HOX2a_HOX2a
-ZmHOX2a(2)                                                                            <---------ANAC58
======================HOX2a_HOX2a                                                  <---------At4g35610
-->ARR14(2)                                                                        --------->At4g35610
-->ARR11(3)                                                                    <-----------GT1
---ARR11(3)                                                                   <---------YAB1
-RAV1(2)------->GAMYB      <---------------AGL15    ---------->DOF2         -------->ATHB1
=======HOX2a_HOX2a       ------>ZmHOX2a(1)        <---------YAB1            --------->YAB1
===================HOX2a_HOX2a                    <---------TOE2(3)         <--------HAHB4     <----
-------->TOE2(3)<---------ICU4              --------->AHL20(1)              --------->ATHB51   -----
=HOX2a_HOX2a   ------>ZmHOX2a(1)           --------->YAB1                   <---------ICU4  --------
=======HOX2a_HOX2a    ------>ZmHOX2a(1)    --------->AHL20(2)              --------->ICU4  <--------
======================HOX2a_HOX2a       --------->YAB1    ----------->GT1  <---------YAB1------>NtERF2
=HOX2a_HOX2a------>ZmHOX2a(1)  --------->YAB1 --------->YAB1            --------->ICU4 <---------ANAC58
 
atcctcaacaacctcctcctaattcctcctccattcatagtaacaataatattaagaaagagggtaaactatgtcagaattattacagttgcctccaggt  268500
                                                                               <---------ICU4
                                                                               --------->YAB1
           --------->MYB52(1)                                                 <---------ATHB12
           ------>MYB83                      ------>NtERF2                    <------ZmHOX2a(2)
           ------>MYB46(1)    --------->AtLEC2       ------->TEIL       <---------ARR14(2)
     <-----------GT1      <-----------HVH21  --------->LBD16            --------->ARR14(2)
-----GLK1(1)           <---------ANAC58     --------->RAP2.3(2)         <---------MYB52(1)
---->GLK1(1)         <---------ARR11(3)     --------->RAP2.6(2)        <---------SPL7          =====
->LBD16--------->ANAC46<---------ANAC58   ------>NtERF2               --------->DEAR3(1)       -----
---RAV1(2) -------->P--------->ARR11(3)   --------->At4g35610      --------->DEAR3(1)     <------ZmHOX2a(2)
 
ttccgatttcaccctaccgatgaagagcttgtcatgcactatctctgccgcaaatgtgcctctcagtccatcgccgttccgatcatcgctgagatcgatc  268600
                  <---------HSFB2a(1)
                  --------->ZAT2
                  <---------ZAT2
                  --------->At4g35610
                  --------->HSFB2a(1)
                  <---------At4g35610
                  --------->HSFC1(2)                            --------->ARR14(2)
         ======================HOX2a_HOX2a                      <---------ARR14(2)      --------->At4g35610
         <------ZmHOX2a(2)                                    --------->LBD16           <---------ZAT2
   --------->ARR14(2)      ----------->HVH21            <----------DOF2                 ----------->RAV1(2)
   <---------ARR14(2)   ------>ZmHOX2a(1)              <---------ICU4                   --------->ZAT2
===============================HOX2a_HOX2a       <----------DOF2<---------GLK1(2)       <---------At4g35610
->ZmHOX2a(2)      <---------HSFC1(2)       <----------DOF2  <---------LBD16      --------->KAN4(2)
 
tctacaaatacgatccatgggagcttcctggtgacatactagctctctttctctttaatctttgccggattctaaatctgagattgttctctgctgactc  268700
                                                                                                   <
                                                                                                  <-
                                                                                                  <-
                                                                                                  --
                                                                                                ----
                                                          ----------->HVH21                   <-----
                                                        --------->LBD16                       ------
                                                       <---------LBD16    --------->MYB52(1)  <-----
                                      --------------->AtSPL8         <---------ARR11(3)   -------->P
                                      <---------------AtSPL3         --------->ARR11(3)  --------->MYB52(1)
                                      --------------->AtSPL3        --------->CCA1(1)   ----------->HVH21
                                      <---------------AtSPL8  ----------->GT1           ------>ZmHOX2a(1)
       <-----------GT1    ----------->GT1         ---------->ARF1   --------->RVE1(1)  <---------MYB59
 
aaattcaattttacaggtttagccttgtatggtgagaaggaatggtacttcttctctcccagggacagaaaatatcccaacggttcgcgtcctaaccggt  268800
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AGI:  At1g01720.1   
Description:  ATAF1 (Arabidopsis NAC domain containing protein 2); transcription factor. Identical to NAC domain-containing protein 2 (ATAF1) [Arabidopsis Thaliana] (GB:Q39013;GB:Q9LQ85); similar to ANAC032 (Arabidopsis NAC domain containing protein 32), transcription factor [Arabidopsis thaliana] (TAIR:AT1G77450.1); similar to NAC-domain protein 18 [Brassica napus] (GB:AAP35054.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441)
Range:  from: 268330    to: 269819    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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