Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                        <------MYB83                                                                           --------->At4g35610    ---                                                                       --------->MYB52(1)        <---      --------->ANAC58                                                 <-----------GT1  ----------->GT1      --------->ANAC58                                              --------->YAB1      <------MYB46(1)    ---------->DOF2          --------->AHL20(2)                <----------ID1<----------DOF2     ---- <---------HSFB2a(2)         <---------AHL20(2)                --------->ANAC58       <--------P <--- --------->HSFB2a(2)        --------->AHL20(2)                 ----------->GT1     <------ZmHOX2a(1) ----ATHB12    --------->ATHB12    <---------YAB1              --------->ANAC58 <-----------RAV1(2)   gatcgagaaagcatccatgatttggagaaaattaatactgattcaaattgaaacatagactagaaacgaaaaataacagctttcaggagttggtaacaat  262400              --------->YAB1             <---------ZAT6                          --------------->AGL15            <---------WOX13(1)                       <---------------AGL15         --------------------->WRI1            ----------->GT1     --------->MYB46(3)                        <---------MYB46(3)                       --------->ANAC46   <-----------GT1                            --------->ALFIN1           --------->ATHB12          <- -------AHL20(2)                          --------->LBD16               --------->MYB46(3)         -- ------>AHL20(2)                        <---------LBD16                <<<<<<<<<<<<<<<<<LFY    ------ ------AHL20(2)                         --------->SPL7    <---------ANAC58              --------->ANAC58 ----->AHL20(2) --------->ICU4        <-----------HVH21   <---------ANAC58 <---------MYB52(1)  <----- ------AHL20(1) <---------YAB1        <---------SPL7<---------YAB1    <-----------GT1   --------->ANAC58   ttaattaaccactgagtgataatcgaacaagacgaaaacccgtccggagtggttactataacttgcatatagtaaccattggttttaaacaagcaaatta  262500                                                                ----------->HVH21                                                              <---------ZAT2           <---------AHL20(2)                                 <---------At4g35610           --------->AHL20(2)                                 --------->At4g35610       >>>>>>>>>>GT-3b                                        --------->ZAT2       <-----------GT1    ----------->GT1                                       --------->MYB52(1)       >>>>>>>>>>GATA-1  ---------->DOF2                                      --------->YAB1            <---------YAB1 ---------ID1                                        <---------AHL20(2)       <---------MYB52(1) ------->ANAC46                                      --------->AHL20(2)  --------->GLK1(2) --->AHL20(2)                                       --------->YAB1      <---------GLK1(2) ----AHL20(2)     <---------YAB1  --------->TOE2(3) --------->AHL20(2)----------->ARR10<---------CCA1(2)   aacgaaaagaaaaataaatactgattcaaatagaaacattagactagaaacgaattaaaataacagctgactgagattctgttattatcgtctcttctca  262600                                                                         <---------ARR14(2)                                                                   <---------REM1(1)  <----------DOF2                                                               <---------TOE1(3)      <---------DAG2                                               <-----------------AGL3    --------->ARR14(2)                                               ======================================================                                               ----------------->AGL3   <------ZmHOX2a(1)        <---                                           ---------->DOF2     <---------TOE2(3)     <---------ANAC58              <-----------GT1<---------AHL20(2)<-----------------AGL2 <---------TOE1(2)          ----              <---------AHL20(2) <---------AHL20(2)        <----------DOF2           <---------ANAC58   tgggccatttagaaatttacttagttcggatttattttaaggccttaaagccattaatgggccttgaggttgtaggatttgtttattgctttttgtttca  262700                                                                <---------ICU4                                                               <---------YAB1                                                             <--------HAHB4                                                             <---------ICU4                                                             --------->YAB1                                                             --------->ATHB51       <-----------HVH21                                                             -------->ATHB1         <-------MYC3                                                             <---------AHL20(2)     ------->MYC3                                                             -------->HAHB4         <-------MYC2                                                            <---------ATHB12        ------->MYC2                                                            <---------ATHB51       <---------ANAC55(2)              --------->TGA2(1)                             <---------YAB1         <---------O2              --------->bZIP60(1)                           --------->ICU4         --------->ANAC46              <---------bZIP60(1)                         <---------ICU4           --------->TGA1a            <-----------GT1                              --------->ICU4     --------->YAB1        --------->AHL20(1)                             --------->YAB1     <-----------TBP        <---------AHL20(2) <---------AHL20(2)         --------->ZAT6   --------->AHL20(2)        --------->AHL20(2) <---------YAB1           --------->YAB1     <---------AHL20(2)       <---------AHL20(2) <---------AHL20(1)      <---------YAB1--------->YAB1     --------->ANAC55(2)       --------->AHL20(2) --------->AHL20(2)   --------->AHL20(2)      <---------AHL20(1) =========================================================MADS_MADS <---------AHL20(2) ------At4g35610          --------->YAB1       <---------AHL20(2) <---------YAB1   <---------TGA1a ----->At4g35610   --------->ANAC46       --------------->AGL15--------->ICU4      --------->O2------   tctcaagaattaaattacatcacaccaatattatttgtatatttcttcatttattaatactaattattattattttatttataacacgtgagagaaataa  262800                                          <-------GAMYB                                         --------->MYB111(2)                                         --------->MYB55(2)                                         <---------MYB46(3)                                         --------->MYB111(1)        --------->TGA1a                                        ======================================MYC_MYB                                        <--------P                  <---------TGA1a                                       <---------MYB52(1)           --------->ZAT2                                   --------->ZAT2                   <---------ZAT2                                   <---------ZAT2                   <---------O2                    <                        --------->HSFB2a(2)                         --------->O2                    -                        --------->TOE2(3)--------->MYB52(2)       <-----------RAV1(2)             ---                        <---------HSFB2a(2)                  <---------ANAC58                     ---              --------->ANAC58     <---------At4g35610       <---------ANAC58                   <----              --------->ANAC46     --------->At4g35610     <---------At5g28300                  <----              --------->ANAC58    <---------ARR14(2)      <-----------GT1                      ------              --------->ANAC55(2) --------->ARR14(2)      <<<<<<<<<GT-1--------->MYB55(2)      ------           <---------ZAT18  *TSS--------->LBD16         <---------WOX13(1)  <------ZmHOX2a(1)  ------           --------->ZAT18 ---------->DOF2====================================MYC_MYB          ------ --->YAB1  <---------WRKY38(1)<---------LBD16         --------->ATHB12--------->ALFIN1       <-------   aaatcgaaccgagtccacgtattcttccataaaccggagctggtagttgatacaattgatttaccttgccaggtgggaggaaaccacattttctcacacc  262900      <---------YAB1    <---------ICU4    --------->YAB1   <---------YAB1                                                                           <-------- --------->YAB1                                                                             <-------- <---------ICU4                                                                             <-------- ---------ATHB12--------->LBD16                                                             <-------- -------->ICU4 ------->GAMYB                                              <---------ANAC46  --------- --->MYB83    --------->DEAR3(2)               --------->AtLEC2           --------->ANAC55(2) --->MYB46(1) --------->MYB46(3)           ------>NtERF2                  <---------ANAC55(2)      -- -----MYB59  ------>MYB46(1)               --------->LBD16       --------->ANAC58        ----------->TGA1 -----MYB111(1)--------->DEAR3(1)         --------->ANAC46       --------->ANAC58        ----------->HVH21 --->ANAC55(1)<------------AtMYB77        --------->ANAC58     <--------P <---------ANAC58 ---------- --->ANAC46  --------->MYB52(1)           --------->ANAC58   <---------ANAC55(2)      <------ZmHOX2a(1) --->ANAC58  -------->P                --------->ARR14(2)   --------->MYB59--------->TOE1(2)<-------- --->ANAC58  ------>MYB83              --------->GLK1(2)   <-----------RAV1(2)      <---------TOE2(3) --ALFIN1 --------->MYB46(3)           <---------ARR14(2)<-----------HVH21<---------ANAC58<---------TGA2(2)   taatcatcatcatccaaccggcgatttcttccgactagccgaatccgccatgaacaccgagtcaggtaagcctataacgtgagattgaggaatgacgtag  263000 --------->ARR11(3) <---------GLK1(2) <---------ARR11(3) -bZIP60(2) -ANAC58                                                                                 <---------ARR11(3) -ANAC55(2)                 <---------ZAT14                         <----------DOF2     <---------ZAT2 -ANAC58                    <---------At4g35610              <---------HSFC1(2)    <---------At5g28300 >ANAC55(2)              <---------At4g35610                 --------->HSFC1(2)   <-----------GT1 --------->ARR10     <-----------RAV1(1)              <---------ANAC46      --------->LBD16 ->STF1     --------->GLK1(1)                         <---------ANAC58     --------->HSFB2a(2) -ANAC46    <---------ARR14(2)                        <---------ANAC58     <---------HSFB2a(2)   tgagattttcggcgaattccatgttgttgctgctctgtttttgtagttgtcgagttccttggaaacgtccctttactccagaaattaccgagctcttctc  263100                                          <-------TEIL                                     <---------AHL20(2)                                       <------MYB46(1)                                     --------->AHL20(2)                                       <------MYB83                                        --------->AHL20(1)                                       <---------DEAR3(2)                                 --------->AHL20(2)                                      <---------MYB46(3)                                  <---------AHL20(2)                                --------->MYB52(1)                               --------->ANAC46 <--                         <---------RAP2.6(3)   --------->TOE2(3)                 --------->ANAC58 ---                <---------MYB46(3)    <---------DEAR3(1)                         --------->ANAC58 ---       <XXXXXXXXXXXXXXXXXXXMIR773B* <-----------HVH21 <---------LBD16          <-----------GT1    <--   tgaagaaaattgctcaagttgttgtgccgaaacgttacggtcggtccattctcaatttcggatttattcttctctctgatttcacgatataaaaaaattg  263200                                                        <------ZmHOX2a(2)                                                       --------->ARR11(3)                                                       <---------ARR11(3)  --------->ALFIN1              --------->DAG2  <---------ANAC46  <-----------RAV1(1)         ---------->DOF2   <---------ANAC58 -------ZAT2        --------->ATHB51            <---------ANAC58               --------->AHL20(2) ------>At4g35610   --------->ATHB12           <-------TEIL                    <---------AHL20(1) ------>ZAT2        -------->ATHB1          <---------MYB46(3)         ------->TEIL    <---------AtLEC2 -------At4g35610  <---------YAB1        <-----------RAV1(1)  --------->TOE1(2)<---------AHL20(2)  --   agctgtgttgttctctattgtattattgaagggaaaggggattatgtggttcgtgaagatcaaacttgggatggatgttattttattttgcaaggagagg  263300  Previous    Next  AGI:  At1g01710.1    Description:  acyl-CoA thioesterase family protein. similar to acyl-CoA thioesterase family protein [Arabidopsis thaliana] (TAIR:AT4G00520.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39602.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Acyl-CoA thioesterase; (InterPro:IPR003703); contains InterPro domain Cyclic nucleotide-binding (InterPro:IPR000595) Range:  from: 262828    to: 267771    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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