Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->TOE2(3)          --------->ARR11(3)          <-----------ARR10                                           --------->YAB1          <---------ARR14(2)               --------->MYB52(1)      <---------ICU4         <---------GLK1(2)              --------->ANAC58           --------->YAB1      --------->HSFB2a(2)               --------->ANAC46          <---------YAB1      --------->HSFC1(1)                --------->ANAC58         <---------AHL20(2)      <---------HSFB2a(2)           --------->At4g35610         --------->YAB1 --------->HSFB2a(1)                <---------At4g35610        <---------YAB1 <---------HSFB2a(1)            --------->ARR14(2)           <---------ICU4 --------->HSFC1(2)             <---------ARR14(2)          --------->ICU4 <---------HSFC1(2)            <---------At4g35610          <---------YAB1     <------ZmHOX2a(1) ---->YAB1--------->GLK1(2)    --------->At4g35610        --------->YAB1 ---------->DOF2 -->ANAC58<---------ARR11(3)   --------->ZAT2            <-------TEIL<----------ID1------------------ -->ANAC58--------->ARR14(2)   <---------ZAT2       <------------MYB.PH3(1)   ----------->GT1   -----   agaagcttcgagaatctttccttcatcgtctccagctctgctacgaaaccgataacagtttcatgattataatgacaaagaggaaatacagacacagaga  261100                                               --------->ANAC58                                        <---------ANAC58          ----------->GT1               <---------ANAC58                                           --       --------->CCA1(2)                <---------ANAC46                                        <---- ------>ANAC81          ----------->RAV1(2)    --------->ANAC58               <---------YAB1    >>>>> ----->DOF2        --------->ANAC46   --------->ARR11(3)                <---------YAB1      ---------   aagagagagagacggagaaacacaaaacctggctctgaaatttcttggaccgcaaggtgctcatcagtctcaatctgattatgtttcaagtcgaagacag  261200                                         --------->ANAC58                            --------->ARR14(1)          <---------ZAT2   <---------ARR14(2)                           --------->ARR14(2)          --------->At4g35610    <---------MYB52(1)   <------ZmHOX2a(1)<---------ARR14(2) --------->GT1             <---------GLK1(2)    --------->YAB1         --------->ARR14(2) ---GAMYB <---------At4g35610   <-------GAMYB  <---------ATHB12    <---------ZAT18                  - >>>>TAC1 --------->ZAT2   --------->ARR14(2)--------->WOX13(1)    --------->ZAT14           <------MYB83 --->AtMYB77         <---------MYB46(3)  --------->ANAC58          <---------ZAT14           <------MYB46(1)   ttggaaaatttgagctcgcagagttgttggattcggttaagacaggccaatcactaggagaagcctcagtgcagaaactgctggtttcatctatttggtc  261300                                                                                               ------                                                                                              <------                                                                                             <-------                                                --------->GLK1(2)                            --------                                                <-----------ARR10                           ---------                    --------->HSFB2a(2)         --------->ARR14(2)                   --------->At4g35610            --------->LBD16                    <---------GLK1(2)                  --------->At4g35610           --------->HSFB2a(2)             ---------->DOF2                      <-----------RAV1(2)           <---------HSFB2a(2)         --------->ANAC58                  --------->LBD16  <---------WOX13(1)         ------>ZmHOX2a(1)         --------->YAB1                <---------ANAC46 <---------At4g35610      <---------ATERF1(1)         <---------YAB1<---------ARR14(2)  <---------ZAT14<---------GLK1(2) --------->DOF2     <---------HSFB2a(2)--------->ANAC58 <---------YAB1 <---------LBD16 <---------YAB1   tgaaaagcctcctccagaggtttcagaacatgttcgatgataagcaaaagaatctgtgctcattgttgagtaaaccggagtttcagatgctgaatgatca  261400                    <---------WOX13(1)                 ----------->HVH21               --------->O2          --------->TCP20          <---------PCF5    ------>ZmHOX2a(2) --->ATHB12    --------->At4g35610                               <-----------GT1 ---YAB1  <---------PCF2<---------YAB1                        <---------GLK1(2)                     = --ARR11(3)    --------->ZAT2                                 <---------ARR14(2)                    - ->ARR11(3)  <-----------RAV1(2)<---------ALFIN1              --------->ARR14(2)                    < >YAB1   ----------->HVH21     <---------ZAT18      --------->ATHB12       ------------>CBF    ------   tttggatcgatgggaccaggtgactgatgatagcccacatcgtcgttttcttcgtgatttggcaaattctccatcttctcaatgttctgtttttgaaaat  261500                             ---------->DOF2                            <---------AHL20(2)                            --------->AHL20(2)               ------>ZmHOX2a(2)                               ------->TEIL             <---------ARR11(3)                  <----------DOF2     <----------DOF2     --------->YAB1         --------->HSFC1(2)                             <----- =====================HOX2a_HOX2a               <---------HSFC1(2)                          --------- ----->ZmHOX2a(1)      <---------AHL20(2)       <---------HSFB2a(1)                         <-------- ---------At4g35610    --------->AHL20(2)       --------->HSFB2a(1)                <---------YAB1---- --->KAN4(2) --------->ARR11(3)      ---------->DOF2 <-------GAMYB  <------ZmHOX2a(1) ------->TEIL   tcctctgcttttgttgatctcttgttttaataaaagaaataaagcttagaactttcgttgtgatgtatcaggaaaactttagaatatgaatctaaatccg  261600                     <---------YAB1        <---------LBD16      --------->GLK1(2)      <---------ARR14(2)     <---------GLK1(2)  --------->YAB1 <---------YAB1                               --------->DAG2 ----ETT(1)    <---------AHL20(2)                            --------->ZAT14 >ARR14(2)     --------->ATHB51                              <---------ZAT14 -ARR14(2)     --------->AHL20(2)              <------ZmHOX2a(1)        <------------CBF    --------- -------->CBF --------->ICU4     ----------->GT1             ---------->DOF2     ---------->ID1------   acaattagaatcgggaattatttttgattcttggatagtgaaattttgaggaccagatagcagtaaagtagaagaattgttttgtttttttttggccaaa  261700             <---------ANAC58        <---------MYB52(1)                                ---------->DOF2       <-----------HVH21     --------->ANAC58         ---------->DOF2       <-------GAMYB        --------->DAG2         --------->ANAC58               --------->AHL20(2)   ------------>MYB.PH3(1) ---------->DOF2         --------->ANAC58             --------->TOE2(3) -------->AGL1   ----------------->AGL1     ---------->DOF2               --------->YAB1            - ---->DOF2   <---------ANAC58--------->ANAC58    --------->MYB52(1)       <-----------GT1      <-----   agcagagaccgttaggcgtgccaaaatcaaaaagcaaaacaaaacataaagaaacgaaaagaaagaaatgaagtaatcacaacattatttatcgaaactt  261800                      --------->YAB1                  <---------YAB1               <---------YAB1            --------->AHL20(1)            --------->AHL20(2)                           ---------->DOF2            <---------AHL20(2)                      <-------TEIL        <---------AHL20(2)                         --------->CCA1(2)                                -       --------->AHL20(2)                         <---------ARR11(3)                               >>     <---------ARR11(3)     <---------ICU4    --------->YAB1                                   <-----     --------->ARR11(3) --------->MYB46(3)   <------ZmHOX2a(2)                               <------- -------->ANAC46<-----------GT1            --------->WOX13(1)                                <------- -----DOF2  <---------AHL20(1)            <---------ETT(2)                             <---------ARR11(3)   tcacgaagatttattttattactataacaaacatttcgcttatgtcgatcaagatacatgaaagtctgaaacttgaaattttgaaaaacgatattaagga  261900       --------->ANAC46       --------->ANAC58                 <----------DOF2       --------->ANAC58             <---------TOE1(3)                                         -------      --------->DAG2                <---------TOE2(3)                                        <-------     ---------->DOF2   --------->AHL20(2)                                                   <-------- ---------->GT1        <---------AHL20(2)               <---------ARR14(2)               --------->YAB1 >>>>>>>TBF1           <---------AHL20(1)          --------->HSFB2a(2)                <----------DOF2 -ZmHOX2a(1)     <----------DOF2<----------DOF2    <---------HSFB2a(2)             ------->TEIL------ --TOE1(3)   ------->GAMYB     --------->TOE2(3) --------->At4g35610 XXXXXXXXXXXXXXXXXXXX>MIR846 --TOE2(3)--------->MYB52(1)<-----------GT1---------->DOF2     <----------DOF2    <---------CCA1(2)   agaagaaaaaagcaacggtctttattttatttacctttaaggctttaaagcttctgcaaatttgtctttgaatttgaaacgcttgaatcttttataacgt  262000  Previous    Next  AGI:  At1g01700.1    Description:  ATROPGEF2/ROPGEF2 (KINASE PARTNER PROTEIN-LIKE); Rho guanyl-nucleotide exchange factor/ / protein binding. similar to ATROPGEF3/ROPGEF3 (KINASE PARTNER PROTEIN-LIKE) [Arabidopsis thaliana] (TAIR:AT4G00460.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN75305.1); contains InterPro domain Protein of unknown function DUF315, plant (InterPro:IPR005512) Range:  from: 259495    to: 261474    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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