Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ARR14(2)                                    <---------------AGL15                                   <-----------------AGL2                            <-------GAMYB                           ----------->GT1      <---------AHL20(2)                         <---------ANAC58                          <------MYB46(1)       <---------YAB1                             <---------ANAC55(1)                          <------MYB83------>MYB46(1)                                      --------->ANAC55(2)                        <--------P ----------------->AGL3                                  <---------ANAC58                      <------MYB83 ----------------->AGL2                                  <---------ANAC55(2)                      <------MYB46(1) ------>MYB83  ----------->GT1          --------->YAB1--------->O2                     --------->MYB46(2)<---------ARR14(2)                   <---------ATHB12        -                     --------->MYB111(2)   <------MYB83                   --------->WOX13(1)  <------              --------->HSFB2a(2)  <-----------------AGL3               <---------YAB1     <---------O2      ------->TEIL   --------->MYB111(1)   <------MYB46(1)             --------->TOE2(3)   <---------bZIP60(2) --------->MYB52(1)  --------->MYB59--------------->AGL15             --------->YAB1       <---------TGA1a -------->DOF2<---------HSFB2a(2)  <-----------------AG             <---------ARR11(3)     --------->TGA1a   aaaaaacgaatttgttttggaagtaggtagggttgaaaccaaatttggttttaattgttaaaacaaactatatcatcaatcatctaatctaagacgtgtc  248000                            --------->AHL20(2)                            <---------AHL20(1)                            <---------AHL20(2)                            --------->AHL20(1)                           <---------AHL20(2)                        <---------AHL20(2)                       <---------AHL20(2)             ----------->HVH21                    --------->ATHB51                <---------O2                    <---------ICU4                  --------->ANAC46                    -------->ATHB1               <---------WRKY38(1)                   --------->ICU4           --------->SPL7       --------->AHL20(2)  --------->AHL20(2)   <------ZmHOX2a(2)   <---------YAB1     --------->ANAC58  --------->AHL20(2) <---------SPL7   --------->ANAC58     --------->ANAC58 <---------YAB1     <---------ANAC58  --------->ANAC58                         <     ----------->GT1<--------HAHB4       <---------ANAC58  ----------->GT1               --------->ANAC58 -------->GLK1(1)  <---------YAB1   <---------ICU4  --------->O2    --------->AHL20(2)   --------->ANAC58 -----HVH21      <---------ICU4    <---------YAB1<---------WRKY12   <---------AHL20(2)   --------->ANAC46   agaattcaagtaaatataagaattattaaataaattgattatttcgtccgatcaacgtgacaagttatatataattgaatcgtccataaacaagctactt  248100                          ----------->RAV1(1)                     --------->At4g35610                     <------NtERF2                     <---------ATERF1(1)                    <---------ATERF1(1)                  <------NtERF2                 ------>NtERF2                 <-----------HVH21                                --------------->AGL15                 <---------ATERF1(1)                            ------->TEIL                 --------->LBD16                            <---------KAN4(2)---------->DOF2                --------->ANAC46                            <---------------AtSPL8                --------->LBD16                             <---------------AtSPL3               <---------LBD16                     <---------TOE2(3)   ---------->DOF2           <---           --------->ARR14(2)                      <---------TOE1(3)------>MYB46(1)              <---           <---------ARR14(2)                     <---------DOF5.7(2)--------->MYB46(3)          <---      ---------->DOF2<---------At4g35610          --------->MYB52(1)------>MYB83                -----    <---------YAB1--------->ZAT2                --------->DOF5.7(2)----------->RAV1(1)         <----- ---------DAG2 --------->LBD16              ---------->DOF2 --------------->AtSPL8           --------   ccccttatgaaagtatccccggcagccccaacaaaacaaaatttgcaaaagttaacgtagagaatgtaccaacaaaagaaaaagacttacaagaagtggt  248200                               --------->ARR11(3)                               <---------ARR11(3)                                         --------->ARR11(3) ------->GAMYB                 <---------ARR14(3)                                         <---------ARR11(3) ------WRKY12                  --------->ARR14(2)                                   --------->HSFC1(1) ------WRKY38(1)               --------->GLK1(2)<---------GLK1(2)                   <---------HSFC1(1) ------WRKY45                  <-----------ARR10--------->ARR11(3)                  <---------HSFB2a(2) ---->WRKY18(1)           ----------->GT1       <---------ARR11(3)                  --------->HSFB2a(2) ------HVH21    ------->TEIL   <---------ARR14(2)                               <----------DOF2     < ->ALFIN1  --------->At4g35610 --------->ARR14(3)      ---------->DOF2       <-----------GT1  <------   caacgaaaatggaagatgaacatgaagaaggaaaatcttcttgacttgaagatttttcaaagcccataacaaagtttttttactttctcgaacatcttga  248300                  --------->ATERF1(1)                  <------NtERF2                <---------ANAC46                <---------ANAC58                                                                <----                <---------ANAC58              <----------DOF2                                  <-----                <---------RAP2.6(2)       <----------DOF2                      <---------ANAC55(2)          <---------ARR14(2)             <---------ANAC58            --------->CCA1(2)  --------->YAB1     ----------->RAV1(1)                 <---------ANAC58       ---------->DOF2<---------HSFB2a(2) ---------At5g28300            <---------ANAC58   <---------------AGL15        --------->HSFB2a(2) ---YAB1  --------->ARR14(2)   <---------ANAC58   <----------DOF2  *TSS        --------->ANAC55(2)  <   ttcactgcaacatatatggcgtcttccatggtttcttactctggctttctttcttttttttgtgagcaaaggtatggagttatggaactattagaaatgc  248400                                          <---------ARR11(3)                                    <----                                     ----------->GT1                                            <----                               <---------AHL20(2)                                               <----                               <---------ICU4                                                   <----                              --------->ICU4   <----------DOF2                    <---------ARR14(2) -----AtLEC2                  --------->AHL20(2)                                  --------->ARR14(2) --TEIL                  ----------->GT1  --------->ARR11(3)    ----------->RAV1(1)             <---- ---------ARR11(3)      <---------TOE2(3)<---------CCA1(2) <----------DOF2<---------AtLEC2      -----   atgatatatagtgggagagggacatcaaggtaataaatacagtatatctcttttcttatccctttgcaacaaaattgcaaggaggtttcggaccatttac  248500                                                                                              -------                                                <---------AHL20(2)                            -------              <---------WRKY12                  --------->AHL20(2)                           <-------           --------->At4g35610                 --------->AHL20(2)                            <------- -----ANAC58  <---------WRKY38(1)           --------->AHL20(2)                               -------- -----ANAC46 --------->WRKY18(1)           <---------AHL20(2)                                <------- -----ANAC55(1)     <---------ANAC58    --------->AHL20(1)                      <---------CCA1(2) -----ANAC58<-----------HVH21      <-----------HVH21                      --------->ZAT6    <-------- -----ANAC55(2)     <---------ANAC46    <---------AHL20(1)            <----------DOF2     <---------ARR14(2) ---->ANAC55(2)     <---------ANAC58    --------->AHL20(2)     --------->At4g35610     <---------TOE2(3)   gtgttattttctcaggtcaatggcttgtgagggtctcggtcatatattatttaattcgaccgagcagttgaactttacacttgtatattaagtttccggg  248600                                                                                           --------->ANAC46                                                                        --------->LBD16    <---------ANAC55(2)                                                                       --------->HSFB2a(2) --------->ANAC55(1)                                                                       <---------HSFB2a(2) --------->ANAC58                                                                      <---------ANAC46     --------->ANAC55(2)                                                             -------->ATHB1                --------->ANAC58                                                             <---------ICU4         <---------------AtSPL8     <---------ZAT6                                          --------->ATHB51       --------------->AtSPL8     ----------->GT1   --------->ZAT6                        --------->ATHB12      <---------ANAC46 -->HSFB2a(2)      ------>ZmHOX2a(1)                        <---------ATHB51      <---------AtMYB61 -->LBD16         --------->TOE1(3)                         <---------YAB1  --------->ARR11(3) --HSFB2a(2)      <---------ANAC55(2)                       <---------AHL20(2)----------------------- --LBD16          --------->TOE2(3)            <---------ARR14(2)     <---------ANAC58  <---------REM1(2) ->HSFB2a(2)<---------AHL20(2)                 --------->GLK1(2)      <---------ANAC58<---------ZAT18 --ANAC46   <---------AHL20(1)         --------->GLK1(2)    --------->ICU4  <---------ARR11(3) -LBD16     --------->AHL20(2)      <---------TOE2(3) --------->ETT(1)<---------LBD16 --------->ZAT14   aatactagtgttaattaattccttaacacttggacattaagtttctgagaatattgtcggaaattattggtttcgggagatgttttggtgtacacgtata  248700                                <-----------RAV1(2)                           <---------AHL20(2)                               --------->ZAT14                          <----------DOF2             -                          --------->ZAT18                         <-----------GT1                  --                          <---------ZAT14                        --------->ARR11(3)    <---------ANAC46                 <---------TOE2(3)                               <---------ARR11(3)    <---------ANAC58           <---------YAB1 --------->ZAT14    <---------YAB1  ---------->DOF2 <---------AHL20(2)  ---- >TaNAC69(2)  <---------YAB1   <---------ZAT14       <---------YAB1     <---------DAG2 <---------ANAC58   catcaagtttgtttttataaatgttgacttcactgcaggttttagttctaatagtatgattttaaaagataccactttttttattttttgtgtgtttggc  248800                                        ---------->DOF2                                      <---------AHL20(2)           <-----------GT1             --------->AHL20(2)   <---------RVE1(1)                --------->MYB52(1)             <--         <---------AHL20(2)      --------->ARR11(3)         <------MYB83                     <-------       --------->ANAC55(2)       <---------ARR11(3)         <------MYB46(1)                 <-------- -------->YAB1                   <---------ARR14(2)  <---------------AGL15                <---------AHL20(2) ------->ICU4<---------AHL20(2)----------->ARR10    <-----------------AGL2               <---------AHL20(2) ----->WOX13(1)    ---------->DOF2<---------CCA1(1) <-----------------AGL3          ------->TEIL<----   aattagtatatgtaattaaaaaaaaggaatgtgaagatattaaaaagaaaacatactgtatttggttcttaacggtttgtgtgatgcattttttaatgtt  248900  Previous    Next  AGI:  At1g01680.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G01670.1); similar to Protein kinase; U box [Medicago truncatula] (GB:ABD32822.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39621.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 246411    to: 248367    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version