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Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                   <---------ICU4
         --------->TOE2(2)
         --------->TOE1(2)
        <---------ZAT2
        --------->At4g35610                    ------>MYB83
        <---------At4g35610 <---------------AGL15
        ----------->RAV1(2) --------------->AGL15         --------->ANAC58
 =====================HOX2a_HOX2a              ------>MYB46(1)   ---------->DOF2           <------ZmHOX2a(1)
 ------>ZmHOX2a(1)<---------YAB1             --------->AtMYB61--------->ANAC58  --------->ZAT6
--->ARR11(3)      --------->ICU4             <---------MYB59  --------->ANAC58<-----------GT1
----ARR11(3)    --------->YAB1            <-----------GT1 --------->ANAC58  --------->AHL20(2)------
-->RVE1(1)     <------ZmHOX2a(2)   ----------->GT1      ---------->DOF2  <---------GLK1(2)<---------
 
cgtcctcattcacctgcgatcataatgaattcaatatagggtattaaaccaaaccatttgaaagcaagaaaagacagaatttaacagtataagaggacaa  242200
                                                                                            --------
                                                                                           <--------
                                        <---------ANAC55(2)                          --------->At4g35610
                                        --------->ANAC55(2)                          <---------At4g35610
                                      --------->YAB1                              <---------ANAC58
  --------->AHL20(2)                  <---------ICU4    <---------YAB1            <---------ANAC58
----->RAV1(1)                      --------->YAB1 <---------ANAC46            <---------ANAC58
-ID1  <-----------GT1        --------->YAB1      --------------->AtSPL8       <---------ANAC58     -
 
cagattaatataccccttcttgttgacaaaaatcaaaataatcatgtaatgtctcgtacatgatagcctccaattcttcaagcttgcgagctaaataatc  242300
                                    <----------DOF2                                            -----
                                    <---------DAG2                                         ---------
                                 <-----------GT1                                     --------->At5g28300
                           --------->ANAC58                                         --------->LBD16
                           --------->ANAC58                                        --------->ANAC46
  --------->AHL20(2)      ------->TEIL                                             --------->ANAC58
->YAB1 <-----------GT1 --------->ANAC58                                            --------->ANAC58
-AHL20(2)              --------->ANAC58                                           <---------LBD16
-------->YAB1       ----------->HVH21         <----------DOF2             --------->ARR11(3)   <----
 
aaacataaaataacttatcaaatgcgacgcatgtaatcacttttctagcctttaaaaacacattagaaaatggcaaacatctagccacggaaaatcatat  242400
                                               <---------LBD16
                                              --------->MYB52(1)
                                              ------>MYB83
                                              ------>MYB46(1)
                                              --------->ZAT2
                                      --------->At4g35610
                                      <---------At4g35610
                               <------ZmHOX2a(2)
                              --------->ARR11(3)
                              <---------ARR11(3)  <------NtERF2
                        <----------DOF2      --------->MYB55(1)
                       <---------ANAC46      --------->ANAC46
---->AHL20(2)          <---------ANAC58     --------->MYB46(3)
>YAB1  <----------DOF2 <---------ANAC58   -------->P  --------->GLK1(2)          <------ZmHOX2a(1)
-----AHL20(2)     --------->ALFIN1   ------->TEIL--------->LBD16 <---------At4g35610      <---------
 
aaatctcgagcttttactcaaatggggcttgaagatcatgaagcttaccagccggagaagctgtttttggctgataaacatggaggatgcagactttctt  242500
                                              <---------bZIP60(1)
                                              --------->bZIP60(1)
                                              <---------TGA2(1)
                                           ----------->HVH21                                       -
                   XXXXXXXXXXXXXXXXXXXX>MIR399B/C                                                  -
            ---------->DOF2      ------>ZmHOX2a(2)                                                --
          ------>ZmHOX2a(1)     <---------At4g35610                                               --
          ==============================HOX2a_HOX2a                                               --
         --------->TOE2(3)     --------->ARR14(2)             ----------->RAV1(1)                <--
      --------->ARR14(2)       <---------ARR14(2)      <---------ZAT14      <---------ICU4     -----
  --------->LBD16  ---------->DOF2 --------->At4g35610 --------->ZAT14      --------->ATHB12   <----
-DOF2 <---------ARR14(2)     ----------->ARR10--------->TGA2(1)            <---------YAB1     <-----
 
agccccgaggttcctcaaagcccaaagaagagttgatctgctctctctgacatcactcttcactgcaacatgaacaacatcattgcccatggccatgagt  242600
----->NtERF2
-------->LBD16
------->ANAC46                                                                                     -
------->ANAC58                                                                                     -
------->ANAC58                                                                                    --
-------LBD16<----------DOF2                      --------->LBD16                                  --
---->ARR14(2)      ---------->ID1         <-----------GT1                                ---------->DOF2
-----ARR14(2)   <----------DOF2      <----------DOF2                                --------->MYB52(1)
----GLK1(1) ------>ZmHOX2a(1)    <---------CCA1(2)--------->LBD16               --------->GLK1(2)---
 
tccgccattgatgtcctttcttttcgccttcgttttctatctttttttcttccctgaaaactgaaaccagataaacagagaagaatctaacagaaagaga  242700
          <---------ZAT6                           <---------ANAC46                             ----
        --------->MYB52(2)                   <---------TOE1(3)                                  ----
      <--------P                            <-----------RAV1(2)                         --------->AHL20(2)
    --------->MYB55(2)                    <----------DOF2                         ------------>CBF
    <---------MYB46(3)                -------->ZAP1<---------ANAC58           <-----------RAV1(1) --
----->MYB46(1)                      <---------WRKY18(1)                       --------->ALFIN1  ----
----->MYB83  ----------->HVH21     --------->ETT(2)<---------ANAC55(2)  ------------>CBF<---------AHL20(2)
--------->RAV1(1)                  ----------->HVH21                ---------->DOF2    --------->AHL20(2)
------->MYB52(1)                   --------->WRKY38(1)              <---------ZAT14    --------->YAB1
------>AtMYB61     ------------>CBF--------->WRKY12<---------ANAC58 --------->ZAT14 --------->WOX13(1)
 
ccaacagtggttagtggtgaccctcaatgttcttcttgttgaccgcttcaggtttcgtgagggagacacagtaaagtcaatgtgtggcaattaaaataca  242800
                                    <-----------GT1
                                <---------DAG2
                                <----------DOF2                 <---------ARR11(3)
                          --------->ANAC58                      --------->ARR11(3)
                          --------->ANAC46               <---------AHL20(2)
        --------->AHL20(2)--------->ANAC58               <---------YAB1
----->ANAC58            --------->MYB52(1)               --------->AHL20(2)                 --------
----->ANAC58         --------->ANAC46                 <----------DOF2                   ------->TEIL
---------->CBF       --------->ANAC58              <------ZmHOX2a(1)                 <---------ATHB12
----->ANAC46         --------->ANAC58          ---------->DOF2  <---------GLK1(2)------------>CBF
 
agtcaatgcataaaaatactaaacaagaaacggcacttttttccagtgaataaaggactttttattagatttttcacaaacaaattcaatgaatcacagc  242900
                                                                                          <---------HSFB2a(2)
                                                                                         <---------LBD16
                            <---------ICU4                              <------NtERF2   <-------TEIL
                            --------->YAB1                              <---------SPL7 --------->GLK1(2)
                           --------->ICU4                             <---------ANAC58 --------->CCA1(2)
                --------->YAB1                                        <---------ANAC58 --------->ARR14(1)
       <---------ALFIN1    <---------ATHB12                           <---------ANAC46<---------GLK1(2)
      --------->ANAC46   --------->YAB1          <-------GAMYB  <---------AHL20(2)    <---------ARR14(2)
    --------->ANAC46  --------->YAB1            <-----------RAV1(1)  <---------LBD16  --------->ARR14(2)
    --------->ZAT6   --------->ZAT6      <---------YAB1 --------->MYB46(3)            --------->ARR11(1)
  <-----------GT1 ------>ZmHOX2a(1)      <---------TOE2(3)    <----------DOF2       ----------->ARR10
->ANAC46      <-----------GT1         --------->ICU4   -------->P    <-----------------------TaNAC69(2)
 
acgattaacaccacatttatcctaatactaataatcacagaattatggatgctgttgcaaccagtctttaatggcggaacgaagaacaagattcgggatg  243000
                                                                                         --------->MYB46(3)
                 ----------->ARR10                                          <----------DOF2       <-
        --------->HSFB2a(2)                       <---------WOX13(1)      --------->At4g35610  -----
        <---------HSFB2a(2)                     --------->ATHB12       <---------At4g35610     <----
     --------->GLK1(2)                        --------->LBD16          --------->At4g35610 ---------
    <---------GLK1(2)    --------->ATHB12 --------->DEAR3(1)           ----------->RAV1(2)------->GAMYB
  <---------ANAC58      <---------YAB1 <-----------GT1          --------->ZAT14        <-----------GT1
  <---------ANAC58 --------->ARR11(3)<-----------GT1         --------->At4g35610    <---------REM1(1)
 
agattgcgattctcgagcctaagatttgtcattggtgatttttcacctccgtgattgagccatcttctgaactcatctgcttcataggtgtaaccatcgg  243100
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AGI:  At1g01660.1   
Description:  U-box domain-containing protein. similar to protein kinase family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G45910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39621.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain U box; (InterPro:IPR003613)
Range:  from: 240057    to: 242608    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At1g01670.1   
Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G01680.1); similar to unknown [Populus trichocarpa] (GB:ABK95716.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain U box; (InterPro:IPR003613)
Range:  from: 242843    to: 245988    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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