Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->CCA1(2)                  ------->GAMYB        ----------->RAV1(1)                     --------->MYB46(3)       --------->MYB46(3)                      --------->At4g35610     ----------->RAV1(1)                      --------->MYB52(1)   <------NtERF2                            <---------ATHB12  ------>NtERF2                            --------->ANAC58 --------->ATERF1(2)        <------ZmHOX2a(1)--------->YAB1 <---------ATERF1(2)     <------ZmHOX2a(1) --------->ANAC58 --------At4g35610     --------->ALFIN1   --------->WOX13(1)               <-----------GT1 ------->At4g35610    <------ZmHOX2a(1)--------->ANAC58                 <---------ZAT6 --------ZAT2<---------ARR14(2)        --------->ANAC58            --------->TOE2(3) ------->ZAT2--------->ARR11(3)      ---------->DOF2         --------->ANAC46      ---------->DOF2   ctgctggcaacaacagatatagaaggaggaggacagtgagaaagcaatcaacagactcattccactaaaccctagtattacaatccaaagcctaaactaa  237400                                                                          ---------->DOF2                                                                  ----------->RAV1(1)                                                                 --------->ANAC58           ---------->DOF2                               ----------->GT1<------ZmHOX2a(2)         ------>ZmHOX2a(1)          <----------ID1   ---------->DOF2  --------->At4g35610         --------->LBD16  --------->CCA1(2)    --------->CCA1(2) --------->ANAC58      <------ZmHOX2a(2)   attccaaattcctgaaagtcaccaagagatagacaagagggacaaggagataagagaaagagtaagaacgacagatcaaagtgaaatagatcaaaaatca  237500                                                                                                  ---                                                                                                  ---                                          <-----------ARR10                            <---------ZAT14                                          <---------ARR14(2)                           --------->ZAT14              <---------REM1(1)           --------->ARR14(2)              --------->ANAC46       ----              <-----------RAV1(1) --------->LBD16                         --------->ANAC58      <----              <---------MYB46(3)--------->At4g35610  --------->ZAT18      --------->ANAC58      <----     --------->ANAC58           <---------At4g35610  <---------ZAT18    --------->MYB52(1)      -----     --------->ANAC58-------->P <---------LBD16<---------ANAC46   ----------->RAV1(1)--------------->AtSPL8   aaccagaacgaaattgttgttgcaaccaggtctctgcggaagcgaatcgtcgtggtgaactatgtctccagcacaaacgaaactagcactgtacaacaac  237600                                                                --------->TOE2(3)                                                                --------->TOE1(3)                                                               ----------->GT1                                                            <---------ARR14(2)                                                            <---------GLK1(2)                                                            --------->ARR14(2)                                                         --------->ANAC58                                                        <---------LBD16  --------->LBD16                       <------ZmHOX2a(2)--------->ANAC55(1) ----->P                               --------->ARR11(3)--------->ANAC58 ------>MYB52(1)                 --------->HSFB2a(2)    --------->LBD16                    ---------- --->GAMYB                       <---------HSFB2a(2)  <---------ZAT14                     ----------- -----MYB55(2)               --------->GLK1(1)        <---------REM1(2)         >>>>>>>>>TBF1 -----MYB111(2)              <---------GLK1(1)      --------->ANAC46---------->DOF2  ---------->DOF2 ---->MYB46(3)     --------->MYB52(1)  <---------ARR11(3)--------->ANAC46     -----------------------   aacccgaagacgaacgagaaacaactgagagatttccacaagatcatattccagactccacggaatcgttaaaaggagggaagaagaaaaagaagataaa  237700                                                                                          <---------TGA1a                                                                                          --------->TGA1a                                                                                          <---------ANAC46                                     <-------TEIL                                         <---------ANAC58                                  <------MYB46(1)                                         <---------ANAC58                                  <------MYB83                                     =================bZIP_DOF                                  ----------->GT1                                  ---------->DOF2                  ----------->GT1--------->MYB59                              --------->AHL20(2) ->GT1          ----------->GT1  <---------------AtSPL8                 ----------->GT1   =========== >GT1     ---------->DOF2      <------ZmHOX2a(1)                        <----------ID1    <---------O2 ->ANAC81<------ZmHOX2a(1)  <---------------------WRI1                 ----------->GT1    --------->O2   aagattagagaggaaagatggagaaaaaatggaggaaggtacaatgaacgagagagagagaagagaagagaagagggaaaaaaaataaagtctcgtggga  237800                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                   <------MYB46(1)                                                               <---                   <------MYB83                                                                 -----                  --------->MYB46(2)                                                           <-----                  <---------DEAR3(1)                                                        ---------                  --------->MYB111(2)                                                       <--------                  <---------MYB46(3)                                                      --------->At4g35610                  --------->MYB111(1)                                  <------------------------ANAC81                  <---------AtMYB61                             <----------DOF2           -----------                 <--------P                                     =====================================                 *TSS   <---------ANAC58                  <----------DOF2       <----------DOF2<-----              --------->DAG2         --------->ANAC58     ===========================================              <---------TOE2(3) <---------ZAT6           <---------ANAC58       =====================       ----------->GT1  <---------ANAC46    --------->TOE1(3)   <---------DAG2  <---------DAG2 <-----     --------->At4g35610<---------ANAC58---------->DOF2  <---------ANAC46    <-----------------AGL1--     --------->CCA1(2) <------NtERF2 --------->ANAC58    <---------ANAC58<-----------GT1  <---------At4g35610 =========================MYC_MYB  <--------P          ------>NtERF2   <-----------GT1    ------>ZmHOX2a(1)   gagagagagatgaaaaaaggttggtgtcgttttagaggtaagtaaagcttaaaacgctggctttgactttttttttctctctctttttggtcctctggcg  237900      <---------ANAC55(2)      --------->ANAC55(2)      <---------ANAC58      <---------ANAC46      <---------ANAC58  <---------PCF2 <---------SPL7 ----------->HVH21 ---->MYC3 -----MYC3 -----MYC2 ---->MYC2 ---->PIF5 -----PIF5 ----->TGA1a ------TGA1a ---------->OsCBT ---NtERF2                                                                    <-----------GT1 ----->ALFIN1                                                            <---------CCA1(1) ------ANAC46                                                            <---------RVE1(1) ------ANAC58                                                           --------->ARR11(3) ------ANAC58                                                         --------->ANAC58 ->NtERF2                                                             --------->ANAC58 ----ANAC46                                    <---------ICU4        --------->SPL7 -->HVH21                               <---------ZAT6              <---------SPL1(1) ---RAV1(1)                         --------->ZAT14                <---------SPL7<---------DAG2 >RAV1(2)                           <---------ZAT14                <---------SPL1(2) ======bZIP_DOF                  --------->ZAT14  --------->ATHB51<---------ANAC58 ----ANAC58                      <---------ZAT14  --------->ATHB12<---------ANAC58<----------DOF2 ======bZIP_DOF                <---------ZAT14 --------->YAB1    --------------->AtSPL8 ======bZIP_DOF                --------->REM1(2) <---------YAB1  <---------------AtSPL3 ----ANAC58                    --------->ZAT14<---------YAB1     --------------->AtSPL3        <----- ------->ALFIN1      <---------AtMYB61  ----------->GT1        ------------------>SPL14   -----------   cgtgggacgcgtgtttagatgtattggtgtctgtgtacagtactgtttattattattgaattctttgtccgtacgatattttgccttttctgtagttata  238000                                                     <---------ZAT14                                                     --------->REM1(2)                                                     --------->ZAT14                                                    --------->ALFIN1                              <---------ANAC55(2) <---------ANAC46                              --------->ANAC55(2) <---------ANAC58                            <---------YAB1        <---------ANAC58                          <--------                          --------->YAB1          --------->DEAR3(1)                        ---------                         <---------YAB1          <------NtERF2                             --------->DAG2                       --------->YAB1           --------->ZAT18                     <---------ARR14(2)                      <---------YAB1           ------->GAMYB                 --------->DOF5.7(2)                      --------->ICU4          --------->MYB46(3)     --------->ALFIN1     ---------->DOF2                    <---------At4g35610    ---------->DOF2          <-------MYC3  ------->GAMYB  --------->YAB1 --------->At4g35610      <------ZmHOX2a(2)         ------->MYC3 --------->ANAC46 ----YAB1        <---------At4g35610     --------->ARR11(3) <---------HSFB2a(2)--------->MYB52(1) >GT1         <---------At4g35610        --------->AGP1     --------->HSFB2a(2)<---------DOF5.7(2) --   tttatcaaaactgtttatctgctgatgatgataagtgataacagatcaagcgccgtgtagttctaaaacatgtggagtcattaacggaaccaaaaagtta  238100                                  <---------ANAC46                                  <---------ANAC58                                  <---------ANAC58                           -------->P                           --------->MYB52(1)       --------->ATHB12                      <-----------GT1               -------->ATHB1                 --------->AHL20(2)                 --------->ATHB51    <----------ID1    <---------AHL20(2)   --------------->AtSPL8 -------AtSPL8   --------->AHL20(1)        <---------------AtSPL8                           --------- -->GT1    --------->YAB1 --------->MYB52(1)       <---------YAB1                    --------->ZAT6 ------->ANAC46  <---------AHL20(1)      --------->YAB1   <---------WOX13(1)         <-----------GT1   cacaaaaaaacaaacatcatatattaacttaccgatgcttgaataatagtactattattgaatgacaaacccattctataatctatatcactatatgcca  238200             --------->ATHB12            <---------YAB1        <-----------GT1                --------->YAB1           <---------TOE2(3) <---------AHL20(2)                 <---------AHL20(2)      --------->ATHB12      <---------AHL20(1)                 --------->AHL20(2)     --------->YAB1     <---------YAB1         <---------AHL20(2)         <---------WOX13(1)       --------->ANAC58  ---     --------->ICU4         --------->AHL20(2)        <---------ANAC58          --------->ANAC58 ----   --------->YAB1   ----------->GT1---------->ID1     <---------ANAC58          --------->ANAC46 <---  <---------YAB1   <---------TOE1(3)                 --------->ATHB12   --------->ARR11(3)      -----  --------->ICU4   <---------TOE2(3) <----------DOF2<---------YAB1      <---------ARR11(3)  --------- >ANAC46  --------->YAB1<---------AHL20(2)      --------->ARR11(3)   <-----------GT1  --------->AHL20(2)   tgttatgattattgatgatttaaggtttaatttttttttcttttttgaaatatgttgattgtctatataataaacatctctcactcaataaaaatcaaat  238300  Previous    Next  AGI:  At1g01650.1    Description:  peptidase. similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G63690.2); similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G63690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39622.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62834.1); similar to growth-on protein GRO11 [Euphorbia esula] (GB:AAL14628.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Peptidase A22, presenilin signal peptide; (InterPro:IPR006639); contains InterPro domain Peptidase A22B, signal peptide peptid Range:  from: 232841    to: 237817    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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