Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->YAB1                     <---------YAB1               --------->AHL20(2)                   --------->YAB1               <---------AHL20(2)        <---------AHL20(2)               <---------AHL20(1)        --------->AHL20(2)                          <---------WRKY18(1)               --------->AHL20(1)        <---------AHL20(1)                         --------->WRKY12              --------->AHL20(2)         --------->AHL20(1)                         ----------->HVH21              <---------AHL20(2)        --------->YAB1                           <---------ARR14(2)          --------->AHL20(2) --------->YAB1  <-----------GT1      --------->KAN4(2) --------->WRKY38(1)    --------->ANAC46--------->AHL20(2)  <---------AHL20(2)      <---------YAB1<--------P  --------->ANAC46 --------->YAB1       --------->AHL20(2)    --------->YAB1----------->GT1   attcacacaaaatcaaataaattataatcaaacatactgaaattatattaccaaaaataagcattgatcattcgaaaatggtagatttgaccggtgctaa  204800                                                                                     >>>>>>>>>>WRKY6                                                                                     >>>>>>>>>>WRKY11                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                     <-------TEIL           <---------AHL20(2)                            <----------DOF2      --------------->AtSPL3  --------->AHL20(1)                         <---------ARR11(1)      <---------------AtSPL8  <---------AHL20(1)        <-                        <---------MYB52(1)       <---------ICU4          <---------AHL20(2) <--------            --------->AHL20(1)               --------->AHL20(2)          --------->AHL20(2) ---------            <---------ARR11(3)              <---------AHL20(2)          --------->AHL20(2)  ---------            <---------AHL20(1)              --------->AHL20(2)        --------->YAB1--------->WRKY12            --------->ARR11(3)           --------->AHL20(2)       <---------AHL20(2)--------->WRKY45    ----------->GT1   <---------ANAC58  <---------AHL20(2)        --------->AHL20(2)--------->WRKY38(1)  <-------TEIL <-----------GT1    ----------->GT1--------------->AtSPL8 <---------AHL20(2)  <-------- --------->CCA1(2)    <---------ANAC58  --------->AHL20(2) ------>ZmHOX2a(1)--------->AHL20(2)     <-   tagatacagtcaaatattttcatgccgtttctttgtttgtaaataaataaataagtacatcctcttaattaaaaataaattaatagttgactaaaatatt  204900                                         <---------At4g35610                                      ----------->RAV1(2)                                           -                                      --------->At4g35610                                           -                                      <---------At4g35610                                           - --------DAG2                --------->GLK1(2)                                                    <-- -ARR11(3)                   --------->ARR11(3)         <----------DOF2                        ------ >ARR11(3)                   <---------ARR11(3)      --------->ARR11(3)                        <----- >AHL20(1)----------->GT1 <---------AHL20(2)         <---------ARR11(3)                        ------ -AHL20(1)<------ZmHOX2a(1) --------->RVE1(1) <----------DOF2                                 ------- ---------DOF2          ----------->TBP  --------->At4g35610<-----------GT1       ----------->RAV1(1)   cctttttccataggataaatactaatataaaaatcttttcatctgctcctttgaagagcttttaatctcttctctgaaaccctcccccagtgactcacca  205000       --------->AHL20(2) ----------->RAV1(1) -------->ANAC58                                                            --------->LBD16 -------->ANAC46                 <---------MYB52(1)                        --------->ANAC46 -------->ANAC58         ----------->ARR10                      <------NtERF2 -------ALFIN1          <------NtERF2                 <---------ICU4       --------->ANAC58 --->AtMYB61          <---------ANAC46      <------NtERF2      --------->LBD16                     <- ----ALFIN1      --------->MYB52(1)       <---------DEAR3(1) <---------LBD16------>NtERF2         <-- --->ANAC46--------->AHL20(2)   <-------GAMYB        ------>ZmHOX2a(1)     --------->ANAC58       --- -->MYB46(3)--------->AHL20(2)<---------ANAC46      --------->TOE2(3)     <---------LBD16     -------   ccacgacaaaaaaataaaaaaacggcgtagtttcggttacttcgtcgtcgtcttcctcatttcgccggaagaattatccgccatgggagacgataagaaa  205100        --------->At4g35610        --------->ZAT2                                         --------->ATHB12        <---------At4g35610                                   <---------AHL20(2)  --------->At4g35610                                         --------->AHL20(1) -----ZmHOX2a(2)                                              <---------AHL20(1) -------ARR11(3)                    <----------DOF2     <-----------GT1                           --- ------>ARR11(3)        ---------->DOF2          <-----------GT1<------------CBF                  --- --->DOF2 <----------DOF2  ----------->GT1--------->ANAC55(2) --------->AHL20(2)                  ---   gatcagaagcagctttcttcatacttgaaagctaaaaacttttcatgtgattcacatttttcattttattggctaatgtcgaggctaatcttcttaattc  205200                                                                                                  ---                                                                                                <----                                                                                              <------                                                                                              -------                                                                                         <-----------HVH21                                                                                        --------->ANAC46                                                                                       --------->MYB46(3) ------>ANAC58                      --------->AHL20(2)        --------->MYB46(3)    <-----------GT1 < ------>ANAC46                    <----------DOF2 ------>ZmHOX2a(1)               <-----------HVH21 - ------>ANAC58               <-----------GT1 <---------At4g35610         <---------GLK1(2)   <-------   tcgccattctcttctctcttcaattcgttttctaccctttaaatttcatctcctcttcttctcaacctctgatcaaattctctgtttcacccgtcgtatc  205300                                                              <------NtERF2                                                             --------->ABI4(1)         <---------MYB46(3)                                  ------>NtERF2         <------MYB83                                       --------->ANAC46         <------MYB46(1)                                    --------->RAP2.3(3)         <---------DEAR3(2)                                 --------->RAP2.6(2)        <---------DEAR3(1)                                  <---------ATERF1(2)       <--------P                                           --------->DEAR3(1)      <-----------HVH21                    <-------PIF5     --------->RAP2.3(2)    --------->LBD16                        ------->PIF5    --------->ORA47(2)  <---------LBD16                     --------->ANAC58     --------->DEAR4(2)  ------>ZmHOX2a(2)             ------>MYB46(1)            --------->ERF1   --------->HSFB2a(2) <------ZmHOX2a(2)              ------>MYB83          <---------GLK1(2)     <---------HSFC1(1) ------>LBD16              --------->MYB52(1)         --------->ARR14(2)    <---------HSFB2a(2) -----LBD16                ------>MYB83   --------->bZIP60(2)<---------ATERF1(1)                ----- ---ARR14(2)               ------>MYB46(1)--------->ANAC46 --------->RAP2.3(1)          ---------->DOF2 -->ARR14(2)             <---------MYB59  --------->ANAC58 --------->ATERF1(1)        --------->At5g28300 ---------ARR14(2)   --------->LBD16  --------->ANAC58<---------ARR14(2)   <---------LBD16      <---- -------->ARR14(2)------->TEIL<---------MYB59     <---------LBD16        --------->GLK1(2)      <---- --CCA1(2)  <-------TEIL --------->AtMYB61--------->ANAC58<---------ATERF1(1)     <---------ALFIN1 --   cggatccgggtcggttcatgaaccggaccaaaccgaactcaagcacgtcgttttcggaatcgccgcctctgcgaaattctggaaacaccgtaaagactac  205400                                           <---------MYB46(3)                                        <---------MYB52(1)                                      <---------ANAC46                               ------->TEIL<------MYB46(1)                      --------->At5g28300  <------MYB83                  --------->MYB52(1) <------NtERF2                                                ---   --------->ARR11(3)----------->GT1------>NtERF2     <---------ALFIN1                           <--- ---->ANAC55(2)   ------>MYB83--------->MYB52(1)    ----------->RAV1(1)                          ==== -----ANAC55(2)   ------>MYB46(1)  <---------DEAR3(1)------>MYB83                          --------->TOE2(2) -----ANAC46     --------->MYB55(1)--------->DEAR3(1)------>MYB46(1)                       --------->TOE1(2) -------->DOF2  --------->AtMYB61  <---------ANAC46--------->AtMYB61<----------ID1   <---------ICU4   gtgaagctctggtggaaaccaaacggtgaaatgaacggcgtcgtttggttagaccaacacattaaccaaaacgacaacgtttcgaaaacattacctccga  205500               ====================================bZIP_DOF               <---------TGA1a               --------->O2               <---------O2               --------->TGA1a               --------->ANAC58               --------->ANAC58           ------>NtERF2           <-----------HVH21          --------->ANAC46          ----------->HVH21                                                            <---------DEAR3(1)          <---------ETT(1)              ---------->DOF2      --------->YAB1         ----------->HVH21        ------>ZmHOX2a(1)            --------->ANAC58       <------ZmHOX2a(2)    <---------ANAC46  <---------ARR14(2)                 --------->ANAC58 <---------DEAR3(1)        <---------LBD16  --------->GLK1(2)                --------->GLK1(1)  ------>ZmHOX2a(2)         --------->HSFB2a(2)  --------->ARR14(2)              <---------GLK1(2)  --------->SPL7             <---------HSFB2a(2)  <-----------ARR10               <---------ARR14(2) <------ZmHOX2a(2)    --------->GLK1(2) <---------GLK1(2)            <---------ZAT14 <---------GLK1(1)           <-----------ARR10      ---- ------>YAB1 <---------ALFIN1 --------->ZAT14 --------->GLK1(1)           <---------ARR14(2)     <--- ---ZmHOX2a(2) <---------ANAC55(2)--------->ARR14(2)<---------ARR14(2)    --------->ARR14(2)    <---- ==============HOX2a_HOX2a--------------->AtSPL3    --------->ARR14(2)   <---------GLK1(2)--------->ALFIN1   tcagaatctcctccgacacgtctaggtttcagtacagatacccaaagggtctccgatcggcgatcagaatcacgagaatcgtctcggagacggtgaggct  205600                                                                          --------->GLK1(2)                                                                          <-----------ARR10                                      <---------YAB1                      <---------ARR14(2)                                  <---------ANAC58                        --------->ARR14(2)                                  <---------ANAC58                   --------->LBD16                                  <---------ANAC46                  --------->LBD16             -----   --------->ANAC46          <---------ANAC46       ------>NtERF2  --------->HSFB2a(2)        <------   --------->ANAC58          <---------bZIP60(2)   --------->ANAC46<---------HSFB2a(2)        <------   --------->ANAC58         <---------AtMYB61      --------->bZIP60(1)    --------->ARR11(3)  ------- ----->At4g35610         <-----------HVH21         <---------bZIP60(1)   <---------GLK1(2)   -------- ----GAMYB              <---------ANAC55(2)   <---------ATERF1(1)  <---------LBD16 <---------TOE2(3) -----MYB46(3) ----------->GT1 --------->ALFIN1--------->ATERF1(1)<---------LBD16  <---------TOE1(3)   gttgaacggaacagagttggagaaaaacgtgaggtggattgtgatgggagacgacgacactgtgtttttcccggagaatcttgtcaaggttttgagaaag  205700  Previous    Next  AGI:  At1g01570.1    Description:  fringe-related protein. similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT4G00300.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71200.1); contains InterPro domain Protein of unknown function DUF604 (InterPro:IPR006740) Range:  from: 205176    to: 207435    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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