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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<------
MYB83
<------
MYB46(1)
<---------
TOE2(3)
--------->
MYB59
--------->
YAB1
---------->
DOF2
<-----------
GT1
<--------
HAHB4
<---------
ATHB12
<----------
DOF2
------>
GT1
<---------
YAB1
<---------
ZAT18
<---------------------
WRI1
gttttacttcaagtgttccatcttcttggtattgaatgtattattaggtttttgtgcaatcgtagtcgtttgtatgagatgctttgaaagtagtagttgt
201700
--------->
LBD16
<---------
ANAC55(2)
<---------
ANAC55(1)
--------->
ANAC55(2)
------>
ZmHOX2a(2)
<----------
DOF2
<-------
TEIL
<---------
YAB1
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
At4g35610
--------->
ARR11(3)
--------->
TOE2(3)
--------->
AGP1
<---------
ARR11(3)
----------->
RAV1(1)
<---------
ARR11(3)
------>
MYB83
--------->
RVE1(1)
------>
ZmHOX2a(2)
<---------
ARR14(2)
------>
MYB46(1)
------->
TEIL
<------
ZmHOX2a(2)
--------->
ARR14(2)
<---------
MYB59
<---------
YAB1
<---------
ARR14(2)
<---------
AGP1
<-----------
GT1
<---------
AHL20(2)
--------->
ARR14(2)
--------->
At4g35610
<
<---------
TOE1(3)
--------->
AHL20(1)
<---------
ARR11(3)
<---------
At4g35610
-----
<---------
TOE2(3)
<---------
AHL20(1)
--------->
ARR11(3)
<-----------
RAV1(1)
<-----
---------->
DOF2
<---------
AHL20(2)
--------->
YAB1
<---------
At4g35610
------
ataagtaaaggttttaccaacttatctatatatattatgaatatctttgaagctatcaagatcccaacatttatc
aactgctgctagatccgtattatcg
201800
----------->
GT1
--------->
MYB59
<-----------
GT1
<---------
MYB52(1)
<---------
At4g35610
-------
GAMYB
--------->
At4g35610
------->
AtMYB77
<------
ZmHOX2a(2)
<---------
At4g35610
----
ETT(2)
<---------
ARR11(3)
<---------
GLK1(2)
<---------
YAB1
<-------
TEIL
--->
ETT(2)
---------->
DOF2
<---------
ATHB12
--------->
At4g35610
----------->
GT1
acagttagatcgaaaattcacagagaaaagagatcaaagacttcaaatcaaacagaagattatcaactgctgatatgattttcaatatacagttacattc
201900
--------->
MYB52(1)
--------->
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(1)
<---------
MYB52(1)
--------->
ARR11(3)
<-------
GAMYB
<---------
ARR11(3)
<---------
TOE1(3)
<---------
AHL20(2)
<---------
ICU4
<---------
TOE2(3)
--------->
AHL20(2)
<---------
GLK1(2)
<---------
At5g28300
--------->
AHL20(2)
<---------
STY1(2)
<---------
ARR14(2)
--------->
ARR11(3)
--------->
At4g35610
<---------
MYB52(1)
--------->
ICU4
<---------
ARR11(3)
<---------
ANAC58
--------->
ARR14(2)
<---------
MYB46(3)
---------->
DOF2
<-----------
GT1
<---------
ANAC58
<-----------
GT1
--------->
KAN4(2)
gactaaaagattttaaaatatattaccggtttgattttcttgttagctagattattacatttcagttacggtttattctcggttgtgcaaaaatgaagtt
202000
<-------
GAMYB
<------
MYB46(1)
<------
MYB83
--------->
MYB59
<---------
MYB52(1)
<------
MYB46(1)
<------
MYB83
<---------
ANAC58
<---------
DEAR3(2)
<---------
ANAC58
--------->
MYB59
<---------
ANAC46
<---------
MYB52(1)
<------------
CBF
<------
MYB46(1)
--------->
LBD16
<------
MYB83
<---------
ANAC46
--------->
TOE2(1)
<---------
DEAR3(2)
<---------
MYB46(3)
------------>
CBF
<---------
SPL7
---
--------->
MYB59
--------->
ARR11(3)
<---------
LBD16
--------->
REM1(2)
<------
NtERF2
---------->
DOF2
gaattagttcggttcggttcggttgatattgggattgagtttgttccggttacattgacttgtagaccaatatgaagtcgtcgtactcagagaaaagacg
202100
--------->
HSFB2a(2)
<---------
HSFB2a(2)
<---------
SPL7
--------->
ETT(2)
--------->
ALFIN1
*
TSS
<---------
TOE1(1)
<---------
ANAC46
<-----------
HVH21
<---------
ANAC46
--------->
ANAC55(2)
<---------
ANAC58
--------->
O2
--------->
CCA1(2)
<-----------
HVH21
<---------
O2
<------
ZmHOX2a(2)
------------>
CBF
<---------
TGA1a
--------->
ARR11(3)
--------->
ANAC58
--------->
TGA1a
--------->
AGP1
--------->
ANAC58
<---------
LBD16
<---------
ARR11(3)
--------->
DAG2
<-------
GAMYB
--------->
MYB52(1)
<-----------
GT1
<-----
========================================
bZIP_DOF
<---------
YAB1
--------->
ARR14(2)
---------->
DOF2
=========================
MYC_MYB
<---------
At4g35610
<---------
ARR14(2)
-------->
GT1
<---------
ANAC58
----------->
HVH21
<<<<<<<<<
TBF1
---------->
DOF2
<
aagaaaaaagcaatgtcgtgtgttgattttcactc
acgggtcgtccgagaagacgaagactcttcttcttctgatttgcccttcaaaagatccaaacttt
202200
------>
MYB46(1)
------>
MYB83
<---------
MYB59
------>
ZmHOX2a(1)
<----------
DOF2
------->
GAMYB
<-----------
ARR10
<---------
YAB1
--------->
AtMYB61
<---------
ARR11(3)
<---------
MYB52(1)
--------->
MYB46(3)
--------->
ARR11(3)
--------->
ANAC55(2)
--------->
ANAC58
<---------
GLK1(2)
--------->
ANAC46
--------->
ANAC58
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
--------->
ANAC58
------->
GAMYB
--------->
ANAC46
--------->
ANAC55(1)
<---------
MYB55(2)
--------->
ANAC58
<-
--------->
ANAC58
--------->
MYB46(3)
--------->
ANAC58
--------->
MYB59
------
HVH21
<---------
MYB111(2)
--------->
ANAC55(1)
<---------
At4g35610
--
---------
TOE1(2)
<----------
DOF2
<---------
MYB111(1)
<---------
ALFIN1
--------->
At4g35610
<--
cacacgttattcttttccctctttttataaaccccaacaaccaaacaagtctccaacacgccaaaatctcctctgtttcatctcaagttagttcaattca
202300
------->
GAMYB
----------->
RAV1(1)
--------->
At4g35610
<----------
DOF2
--------->
bZIP60(1)
<----------
DOF2
----------->
HVH21
<-------
--------
ARR11(3)
<---------
YAB1
----------->
GT1
<
------->
GLK1(2)
<-----------
RAV1(1)
----------->
GT1
<---------
bZIP60(1)
--------->
ICU4
-------
GLK1(2)
<---------
DAG2
---------->
DOF2
<---------
DEAR3(1)
<------
ZmHOX2a(1)
gaatctttgagtttgaacttttttttgttgggagaaagagagaa
atgtcaatagagaaaccattcttcggtgatgacagcaacagaggagtaagtatcaa
202400
<---------
ZAT14
----------->
GT1
<---------
ANAC46
<---------
ZAT14
--------->
At4g35610
--------->
ZAT14
<------
NtERF2
--------->
ZAT18
--------->
RAP2.6(3)
<---------
ZAT18
--------->
ARR14(2)
<---------
MYB52(1)
--------->
MYB52(1)
<-------
GAMYB
------>
ZmHOX2a(1)
--------->
At4g35610
<---------
MYB46(3)
---------->
DOF2
<---------
ARR14(2)
<---------
MYB46(3)
--------->
GLK1(1)
<---------
HSFB2a(2)
------>
ZmHOX2a(1)
<--
--
YAB1
<---------
ANAC46
<---------
GLK1(1)
--------->
HSFB2a(2)
---------->
ID1
--------
---------
AtMYB61
--------->
ZAT14
<----------
DOF2
--------->
DAG2
------>
ZmHOX2a(1)
<---------
At4g35610
tggtggtcgttatgtgcagtataatgtctatggaaatctctttgaagtttctaaaaagtatgttcctcctcttcgtcctatcggcagaggcgcttctggc
202500
<--------
P
<----------
DOF2
--------->
CCA1(2)
----
NtERF2
<-----------
RAV1(1)
XXXXXXXXXXXXXXXXXXXXX>
MIR447A/B
<
->
HSFB2a(2)
--------->
At4g35610
<----------
DOF2
---------->
DOF2
<---
atcgtctg
gttagcatctaaaactgttgtcttttttttttgagtttttagctttagagatgagacattttgttaaaggctaagtttgtgctcaaaacttg
202600
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AGI:
At1g01550.1
Description:
BPS1 (BYPASS 1). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46080.1); similar to unknown [Populus trichocarpa] (GB:ABK94247.1)
Range:
from: 199639
to: 201775
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At1g01560.1
Description:
ATMPK11 (Arabidopsis thaliana MAP kinase 11); MAP kinase/ kinase. Identical to Mitogen-activated protein kinase 11 (MPK11) [Arabidopsis Thaliana] (GB:Q9LMM5); similar to ATMPK4 (MAP KINASE 4), MAP kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G01370.1); similar to double HA-tagged mitogen activated protein kinase 11 [synthetic construct] (GB:ABG54338.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (Int
Range:
from: 202136
to: 204335
Orientation: Forward
Links:
TAIR
MIPS
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when using AthaMap.
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